Lates calcarifer (barramundi perch): 108891731
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Entry
108891731 CDS
T04895
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04510
Focal adhesion
lcf04512
ECM-receptor interaction
lcf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108891731 (lamb4)
04518 Integrin signaling
108891731 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108891731 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108891731
NCBI-ProteinID:
XP_018544545
LinkDB
All DBs
Position
LG10:complement(49908..79328)
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AA seq
1847 aa
AA seq
DB search
MATSHWLFCTASGYVSLRCAVTCPDMFILSVAAAAEISRSQEEEEDKMIFIFIILLPVAW
LQNLQDLQDQCPGASCNPQLGDLMVGRAAQLSASSTCGLNGPQTYCIIGYLEEEQKCFTC
DSRLLYDRYSNPNSHRIENIITTFDPERKLKWWQSENGVHQVSIQLDLETVFQFSHLVLT
FKSFRPAAMLVERSKDFGRTWKVFRYFADDCSLHFPSVSSDPADSINDIVCDSRYSGSEP
STDGEVVLKALDPIFEIQNPYSPNIQDLITLTNIRVNFTRLFTLGDTLLSRRRRNPQNKY
YYALYNMVVRGSCFCNGHASRCTPVDGGRGDVFTQTGMVHGHCVCQHNTAGENCERCQDF
YHDSPWRPGGENTADICRRCNCHGHSDTCHFDAARLEATGGVSGGVCDDCRHDRMGPQCE
QCRPFLYQDPQRATDDPHACIPCDCDPAGSHGGGLCDTRDGRCLCKENVEGRRCDRCKHG
FFGLRKDEPAGCQACRCHALGSIGSCDQVTGNCECDHLASGPLCDRCVAGFWGLGNSVFR
CSPCDCDIGGAHSSSCSPEDGQCHCLPNMIGRRCSDPAPGYFLPQLDYFLYEAELTAPLH
VGSSASTTNTPSSSSSLLNPVVLPQCEQYYREQGYDFRFTNGRVVLVRRTRRHVRRRRQR
QHQTSIPLDLGHALQIIPRQRTPDQPVTWTGLGLVRVLEGAGLRFTVDNLPSSMDYQLVI
RYEPETPSDWLASVSIITLSPGDRGCSSDPTGSQTLVLPGNSRGGVLNSAVCLNAGARYF
VDVIFNKQAGSDGSHILIDSMGLIPSIDSVQDFCSQSDLESFRRFRCIGLAAELDPQESL
PEICEGLIKSMSARIHSGAVPCKCNIIGSLGPSCSKLGGFCECKPNVIGRCCDTCAPLTF
GFGPGGCKPCECDHQGSMSELCDQVRGQCACRSEVTGRRCDRCRAGFWRFPLCRPCECNG
LSEVCDQETGECLNCREYANGPHCDRCEEGYYGDPVSRQPCQPCLCPDVQRSGRFFATSC
QHDPQSLSLTCSCREGHTGPRCDRCSPGFYGNLSLPGARCEGCPCNNNIDWDDRDACDSL
TGECLRCLHNTMGSGCQNCKPGYYGNALVQDCKECSCDRRGTEVTQCPLGSPCFCNPRTG
QCPCRRGAVGVLCDECEDGYWNLDGPSGCQPCSCDPVNSFSNICNKVMGQCPCRPEFGGR
QCDECGENHFGNPDLQCISCDCNLEGTERPSCDPETGECICRTGVTGIFCDECAVGYSSE
FPACKECHPCTILWTENVTDVQRAAQRMRTFIPRHGDNLRPRDSHHRQRMLEMHSKLDRL
TNLTGLSLPKVEKVEKLCMKIRKLKDAIDPNTILIDLSPLLNTEIDNIGLEFKKLLNSLK
EKLIKDPDDEDKGDLEELLDEIQKLHKDFMSDEKKVRNANKALEDSMDTRKEVKHKLSTC
SSSGDLTPMEKKIKELSVVKLNQKVCGGPGLDDCSGCGGALCGLDLGKRKCGGPNCDGVI
SVSERASEMAEKAKDQLNTLPSRLEESKNKINDAKQAAQDTKDQAKDLQDQISDNIDSLE
RERSITRKLIQQVKDYLMDEMVPPEDIEKMARAVLAIQLPRSPAKIQSMINDINNLLSNT
MHFQNDLKNLEEHAKTAQDLLQKAQELKERSKDIDVSQINRDIYESEKAQSKANDDLEAA
SRDRDMTKDRLPDIKDKLDDIETKLMNRQHENLLNEIEALKKKTEQNQEMARDAQEAATS
SALNAIDTAKELDNAMKLFEVLKEKNLNQTVQGEAGERLKKIMEEAENMKREVEDKLTQI
QGLEEKIQQLIRSKEEKSAEVSKLFETVDSLRQEISKRAEIYATCTT
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcacactggttgttctgtacagcctcaggctacgtttctctcaggtgtgct
gttacctgcccagatatgttcattctttcagtggcagcagcagcagaaatcagcaggagt
caggaggaagaggaggacaaaatgatcttcatcttcatcattcttcttccagtggcttgg
ctccagaacctccaggacctccaggaccagtgtcccggtgcatcctgtaatccacagctg
ggtgacctgatggtgggtcgagctgctcagctctcagcctcatcaacctgtggtctgaat
ggacctcagacctactgcatcatcggatacctggaggaggagcagaagtgtttcacctgt
gactctcgtctgctgtatgatcgctacagcaaccccaacagtcaccgcatcgagaacatc
atcacaacctttgacccagagagaaaactaaagtggtggcagtctgagaacggcgttcat
caggtcagcatccagttagacctggagacagtgttccagtttagtcacctggtcctcacc
ttcaagagtttccgtccagcggccatgttggtggagcgatcgaaggattttggtcgaact
tggaaagtttttcgttactttgcagacgactgctcacttcatttcccgtcagtgtcaagt
gatccggccgacagcatcaatgacattgtctgtgacagcagatactccggatcagagccg
tccactgacggagaggtggtgctgaaagcgctggatcctatctttgaaatacaaaaccca
tattcaccaaacatccaagatctgatcactctgaccaacattcgggtgaacttcactcgt
ctgttcacactcggtgacacgctgctgagtcgaagacgcaggaaccctcagaacaaatat
tactacgctctgtataacatggtggtccgaggaagctgcttctgtaatggacatgccagc
cggtgtacacctgtggatggaggacggggggacgtcttcacccagactggcatggttcat
ggtcattgtgtttgtcagcacaacacagccggagagaactgtgagagatgtcaggacttt
taccacgattccccctggaggcctggaggagaaaacacagctgacatctgcaggagatgt
aactgtcacggtcattcggacacatgtcacttcgacgcagctcgtttggaggcgacgggc
ggcgtgagcggcggtgtgtgtgatgactgccgccatgacaggatggggcctcagtgtgaa
cagtgtcgacctttcctgtatcaggacccacagagagcgacagacgacccacacgcctgc
ataccatgtgactgtgacccagccgggtctcatggcggaggtctctgtgacactcgggac
ggtcgatgtctctgtaaagaaaacgtggagggtcgacgctgcgatcgttgcaaacacggc
ttctttggtctgagaaaggatgagcccgctggctgccaggcgtgcaggtgtcatgctttg
ggaagcattgggtcatgtgatcaggtgacaggaaattgtgaatgtgaccatctggcaagc
gggccactgtgtgatcgatgtgtggcaggtttctggggtttgggaaactcagtgttcaga
tgttctccctgtgactgtgacattggaggagctcacagcagctcgtgttctccagaggac
ggacagtgtcactgtttaccaaacatgattggtcggcgttgctctgaccctgccccaggg
tacttcctgcctcaactggactatttcctatatgaagcggagctcactgccccgctgcac
gtaggaagttctgcttcaactactaacactccgtcatcatcgtcttctctgttgaatcct
gtagtattacctcagtgtgagcagtactacagagagcagggttacgacttcaggttcact
aatggacgagttgtcctagtccggaggactcgtcgacatgtccgcaggaggaggcaaaga
cagcaccagaccagcatccctctggatctgggtcacgccctgcagatcattccccgtcag
aggacacctgatcagcccgtcacttggactggcttgggattggtcagagtgttggagggg
gcggggcttcggttcactgtggacaacttgccatcatccatggattaccagctggtgatt
cgctacgagccggagactccatctgattggctggcttcagtcagcatcatcacactgtca
ccaggtgacaggggctgcagcagcgacccaacaggaagtcaaactctggttcttcctgga
aactccagaggaggtgttttgaattctgcggtgtgtctgaacgctggagctcggtacttt
gtcgacgtcatctttaataaacaagctggatctgatggatcacatatcctgatcgactcg
atgggtttgattcccagcatcgactctgtccaggacttctgctcccagagtgacctggaa
tctttccgccgttttcgctgcattggattggctgctgaactcgacccacaggagtcacta
ccagaaatctgtgagggactcatcaagagtatgtcagcacgaatccacagcggagctgtt
ccttgcaagtgtaacatcattggttcactcggaccatcctgcagtaaactgggtggcttc
tgtgaatgtaaacccaacgtgattggccgttgctgtgatacctgtgcaccactgacattt
ggcttcggacctggcggctgcaagccatgtgaatgtgaccatcagggttcaatgtcagag
ctgtgcgatcaggtcagaggtcagtgtgcgtgtcgttcagaggtgacaggtcgacgctgc
gatcgctgtcgggcaggattctggcgtttccctctctgtcgaccctgtgagtgtaacgga
ctgtcagaggtctgcgaccaagagaccggagagtgtctgaactgcagagagtacgccaac
ggaccacactgtgacaggtgtgaggagggttactatggcgaccctgtctccagacagccc
tgtcagccctgcttgtgtccagatgttcagaggagtggacggttctttgccacttcctgc
caacatgacccacaatccctcagtctgacctgcagctgcagggagggacacacaggtcca
cgctgcgacaggtgcagccctggtttctatggtaacctatcgttgccaggtgccaggtgt
gaggggtgtccctgcaacaataacatcgactgggacgatcgtgacgcctgcgacagtctg
acaggcgaatgtttgcggtgtctccacaacacgatgggatcaggctgtcaaaactgcaaa
cctggttactatggcaacgccctggtccaagactgcaaagaatgctcgtgtgaccggcgg
gggacggaggtgactcagtgtcctctggggagtccctgtttctgtaacccgagaacggga
cagtgtccttgcaggaggggtgcagtgggagtcctctgtgacgaatgtgaggacggatac
tggaacctggatggaccgtcaggatgtcagccctgcagctgtgatcctgttaactctttc
tccaacatctgcaacaaggtgatgggacagtgtccatgtcgtcctgagtttggagggaga
cagtgtgatgaatgtggagaaaatcattttgggaatccagacctgcagtgtatatcttgt
gactgtaacctggagggaactgagcgtccatcatgtgaccctgaaaccggtgaatgtatc
tgtcgaaccggtgtcactggtatcttctgtgacgagtgtgccgtcggttacagctcagag
ttcccggcctgtaaggagtgccacccctgcaccatcctttggactgaaaatgtcactgat
gtccagcgagctgcccaaaggatgagaaccttcatccctcgccatggcgacaatctgcgc
cccagagacagtcaccacagacaacggatgctggagatgcactccaaactggacaggctt
accaatctgacaggactgtccctgccgaaggtggagaaggtggagaaactgtgcatgaag
attaggaagctgaaagatgccatcgacccgaacacgatcctcattgatctgtctcctctc
ctcaacactgaaattgacaacattggtttggagttcaagaagctactgaacagcttgaag
gaaaaactaatcaaggatccagatgatgaagataaaggggacctggaagagctcctggat
gagatccaaaagcttcataaagacttcatgtcagatgaaaagaaggtaagaaacgccaac
aaagctttagaggactccatggacaccagaaaggaagttaaacacaaactgagcacgtgc
agcagcagtggagatctgacgccaatggagaagaagatcaaagagctcagtgtggtcaag
ctcaaccagaaggtctgtgggggaccaggtctagacgactgttcaggatgtggtggagct
ctgtgtggtctggatctggggaaaaggaaatgtggaggtccaaactgtgatggagtcatt
tctgtcagtgagagagcttcagaaatggcagagaaagcaaaggaccaactcaacacgctc
ccatctagactggaagaatccaagaacaagatcaatgatgccaaacaggcagctcaagac
accaaagaccaggccaaagacctgcaggaccagatcagcgacaatatagactccttagag
agagagaggagcataaccaggaagctcatccagcaagttaaagactacctgatggatgag
atggttcctccagaagacatcgagaaaatggcccgagctgttctggccatccagctgcca
cgatcacctgctaaaatccaatcaatgatcaatgacatcaataatctgctgtccaacact
atgcacttccagaatgacctgaagaacctggaggagcacgccaagactgcccaggacctg
ctgcagaaagctcaggagctcaaggaacgatcaaaggacattgatgtgtcacagattaac
agagacatttatgaatcagagaaagctcagagcaaagccaatgacgacctggaagcagcc
agccgagacagagacatgaccaaagaccgactcccagacattaaagacaaactggacgac
attgagacaaagctgatgaatcgtcaacatgaaaatctgctaaatgagattgaagctctg
aagaagaaaactgaacagaaccaagagatggccagagacgcccaagaggctgcaacgtcc
tcagctttgaacgctattgacacagcaaaggaactggacaatgcgatgaaactgtttgag
gttttaaaagagaaaaacttgaaccagacggttcagggtgaagctggagaacgactgaag
aaaatcatggaggaggcggagaacatgaagagagaggtggaggacaaactgacacagata
caaggtctggaggagaagatccagcagctgatcaggagtaaggaggaaaaatcagctgaa
gtctcaaagttgttcgaaacagtcgattcacttcgacaggaaatctccaaacgagctgaa
atatatgccacctgtactacgtaa
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integrated database retrieval system