KEGG   Lates calcarifer (barramundi perch): 108891731
Entry
108891731         CDS       T04895                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04510  Focal adhesion
lcf04512  ECM-receptor interaction
lcf04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108891731 (lamb4)
   04518 Integrin signaling
    108891731 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108891731 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 LAMB4 F5_F8_type_C
Other DBs
NCBI-GeneID: 108891731
NCBI-ProteinID: XP_018544545
LinkDB
Position
LG10:complement(49908..79328)
AA seq 1847 aa
MATSHWLFCTASGYVSLRCAVTCPDMFILSVAAAAEISRSQEEEEDKMIFIFIILLPVAW
LQNLQDLQDQCPGASCNPQLGDLMVGRAAQLSASSTCGLNGPQTYCIIGYLEEEQKCFTC
DSRLLYDRYSNPNSHRIENIITTFDPERKLKWWQSENGVHQVSIQLDLETVFQFSHLVLT
FKSFRPAAMLVERSKDFGRTWKVFRYFADDCSLHFPSVSSDPADSINDIVCDSRYSGSEP
STDGEVVLKALDPIFEIQNPYSPNIQDLITLTNIRVNFTRLFTLGDTLLSRRRRNPQNKY
YYALYNMVVRGSCFCNGHASRCTPVDGGRGDVFTQTGMVHGHCVCQHNTAGENCERCQDF
YHDSPWRPGGENTADICRRCNCHGHSDTCHFDAARLEATGGVSGGVCDDCRHDRMGPQCE
QCRPFLYQDPQRATDDPHACIPCDCDPAGSHGGGLCDTRDGRCLCKENVEGRRCDRCKHG
FFGLRKDEPAGCQACRCHALGSIGSCDQVTGNCECDHLASGPLCDRCVAGFWGLGNSVFR
CSPCDCDIGGAHSSSCSPEDGQCHCLPNMIGRRCSDPAPGYFLPQLDYFLYEAELTAPLH
VGSSASTTNTPSSSSSLLNPVVLPQCEQYYREQGYDFRFTNGRVVLVRRTRRHVRRRRQR
QHQTSIPLDLGHALQIIPRQRTPDQPVTWTGLGLVRVLEGAGLRFTVDNLPSSMDYQLVI
RYEPETPSDWLASVSIITLSPGDRGCSSDPTGSQTLVLPGNSRGGVLNSAVCLNAGARYF
VDVIFNKQAGSDGSHILIDSMGLIPSIDSVQDFCSQSDLESFRRFRCIGLAAELDPQESL
PEICEGLIKSMSARIHSGAVPCKCNIIGSLGPSCSKLGGFCECKPNVIGRCCDTCAPLTF
GFGPGGCKPCECDHQGSMSELCDQVRGQCACRSEVTGRRCDRCRAGFWRFPLCRPCECNG
LSEVCDQETGECLNCREYANGPHCDRCEEGYYGDPVSRQPCQPCLCPDVQRSGRFFATSC
QHDPQSLSLTCSCREGHTGPRCDRCSPGFYGNLSLPGARCEGCPCNNNIDWDDRDACDSL
TGECLRCLHNTMGSGCQNCKPGYYGNALVQDCKECSCDRRGTEVTQCPLGSPCFCNPRTG
QCPCRRGAVGVLCDECEDGYWNLDGPSGCQPCSCDPVNSFSNICNKVMGQCPCRPEFGGR
QCDECGENHFGNPDLQCISCDCNLEGTERPSCDPETGECICRTGVTGIFCDECAVGYSSE
FPACKECHPCTILWTENVTDVQRAAQRMRTFIPRHGDNLRPRDSHHRQRMLEMHSKLDRL
TNLTGLSLPKVEKVEKLCMKIRKLKDAIDPNTILIDLSPLLNTEIDNIGLEFKKLLNSLK
EKLIKDPDDEDKGDLEELLDEIQKLHKDFMSDEKKVRNANKALEDSMDTRKEVKHKLSTC
SSSGDLTPMEKKIKELSVVKLNQKVCGGPGLDDCSGCGGALCGLDLGKRKCGGPNCDGVI
SVSERASEMAEKAKDQLNTLPSRLEESKNKINDAKQAAQDTKDQAKDLQDQISDNIDSLE
RERSITRKLIQQVKDYLMDEMVPPEDIEKMARAVLAIQLPRSPAKIQSMINDINNLLSNT
MHFQNDLKNLEEHAKTAQDLLQKAQELKERSKDIDVSQINRDIYESEKAQSKANDDLEAA
SRDRDMTKDRLPDIKDKLDDIETKLMNRQHENLLNEIEALKKKTEQNQEMARDAQEAATS
SALNAIDTAKELDNAMKLFEVLKEKNLNQTVQGEAGERLKKIMEEAENMKREVEDKLTQI
QGLEEKIQQLIRSKEEKSAEVSKLFETVDSLRQEISKRAEIYATCTT
NT seq 5544 nt   +upstreamnt  +downstreamnt
atggcaacatcacactggttgttctgtacagcctcaggctacgtttctctcaggtgtgct
gttacctgcccagatatgttcattctttcagtggcagcagcagcagaaatcagcaggagt
caggaggaagaggaggacaaaatgatcttcatcttcatcattcttcttccagtggcttgg
ctccagaacctccaggacctccaggaccagtgtcccggtgcatcctgtaatccacagctg
ggtgacctgatggtgggtcgagctgctcagctctcagcctcatcaacctgtggtctgaat
ggacctcagacctactgcatcatcggatacctggaggaggagcagaagtgtttcacctgt
gactctcgtctgctgtatgatcgctacagcaaccccaacagtcaccgcatcgagaacatc
atcacaacctttgacccagagagaaaactaaagtggtggcagtctgagaacggcgttcat
caggtcagcatccagttagacctggagacagtgttccagtttagtcacctggtcctcacc
ttcaagagtttccgtccagcggccatgttggtggagcgatcgaaggattttggtcgaact
tggaaagtttttcgttactttgcagacgactgctcacttcatttcccgtcagtgtcaagt
gatccggccgacagcatcaatgacattgtctgtgacagcagatactccggatcagagccg
tccactgacggagaggtggtgctgaaagcgctggatcctatctttgaaatacaaaaccca
tattcaccaaacatccaagatctgatcactctgaccaacattcgggtgaacttcactcgt
ctgttcacactcggtgacacgctgctgagtcgaagacgcaggaaccctcagaacaaatat
tactacgctctgtataacatggtggtccgaggaagctgcttctgtaatggacatgccagc
cggtgtacacctgtggatggaggacggggggacgtcttcacccagactggcatggttcat
ggtcattgtgtttgtcagcacaacacagccggagagaactgtgagagatgtcaggacttt
taccacgattccccctggaggcctggaggagaaaacacagctgacatctgcaggagatgt
aactgtcacggtcattcggacacatgtcacttcgacgcagctcgtttggaggcgacgggc
ggcgtgagcggcggtgtgtgtgatgactgccgccatgacaggatggggcctcagtgtgaa
cagtgtcgacctttcctgtatcaggacccacagagagcgacagacgacccacacgcctgc
ataccatgtgactgtgacccagccgggtctcatggcggaggtctctgtgacactcgggac
ggtcgatgtctctgtaaagaaaacgtggagggtcgacgctgcgatcgttgcaaacacggc
ttctttggtctgagaaaggatgagcccgctggctgccaggcgtgcaggtgtcatgctttg
ggaagcattgggtcatgtgatcaggtgacaggaaattgtgaatgtgaccatctggcaagc
gggccactgtgtgatcgatgtgtggcaggtttctggggtttgggaaactcagtgttcaga
tgttctccctgtgactgtgacattggaggagctcacagcagctcgtgttctccagaggac
ggacagtgtcactgtttaccaaacatgattggtcggcgttgctctgaccctgccccaggg
tacttcctgcctcaactggactatttcctatatgaagcggagctcactgccccgctgcac
gtaggaagttctgcttcaactactaacactccgtcatcatcgtcttctctgttgaatcct
gtagtattacctcagtgtgagcagtactacagagagcagggttacgacttcaggttcact
aatggacgagttgtcctagtccggaggactcgtcgacatgtccgcaggaggaggcaaaga
cagcaccagaccagcatccctctggatctgggtcacgccctgcagatcattccccgtcag
aggacacctgatcagcccgtcacttggactggcttgggattggtcagagtgttggagggg
gcggggcttcggttcactgtggacaacttgccatcatccatggattaccagctggtgatt
cgctacgagccggagactccatctgattggctggcttcagtcagcatcatcacactgtca
ccaggtgacaggggctgcagcagcgacccaacaggaagtcaaactctggttcttcctgga
aactccagaggaggtgttttgaattctgcggtgtgtctgaacgctggagctcggtacttt
gtcgacgtcatctttaataaacaagctggatctgatggatcacatatcctgatcgactcg
atgggtttgattcccagcatcgactctgtccaggacttctgctcccagagtgacctggaa
tctttccgccgttttcgctgcattggattggctgctgaactcgacccacaggagtcacta
ccagaaatctgtgagggactcatcaagagtatgtcagcacgaatccacagcggagctgtt
ccttgcaagtgtaacatcattggttcactcggaccatcctgcagtaaactgggtggcttc
tgtgaatgtaaacccaacgtgattggccgttgctgtgatacctgtgcaccactgacattt
ggcttcggacctggcggctgcaagccatgtgaatgtgaccatcagggttcaatgtcagag
ctgtgcgatcaggtcagaggtcagtgtgcgtgtcgttcagaggtgacaggtcgacgctgc
gatcgctgtcgggcaggattctggcgtttccctctctgtcgaccctgtgagtgtaacgga
ctgtcagaggtctgcgaccaagagaccggagagtgtctgaactgcagagagtacgccaac
ggaccacactgtgacaggtgtgaggagggttactatggcgaccctgtctccagacagccc
tgtcagccctgcttgtgtccagatgttcagaggagtggacggttctttgccacttcctgc
caacatgacccacaatccctcagtctgacctgcagctgcagggagggacacacaggtcca
cgctgcgacaggtgcagccctggtttctatggtaacctatcgttgccaggtgccaggtgt
gaggggtgtccctgcaacaataacatcgactgggacgatcgtgacgcctgcgacagtctg
acaggcgaatgtttgcggtgtctccacaacacgatgggatcaggctgtcaaaactgcaaa
cctggttactatggcaacgccctggtccaagactgcaaagaatgctcgtgtgaccggcgg
gggacggaggtgactcagtgtcctctggggagtccctgtttctgtaacccgagaacggga
cagtgtccttgcaggaggggtgcagtgggagtcctctgtgacgaatgtgaggacggatac
tggaacctggatggaccgtcaggatgtcagccctgcagctgtgatcctgttaactctttc
tccaacatctgcaacaaggtgatgggacagtgtccatgtcgtcctgagtttggagggaga
cagtgtgatgaatgtggagaaaatcattttgggaatccagacctgcagtgtatatcttgt
gactgtaacctggagggaactgagcgtccatcatgtgaccctgaaaccggtgaatgtatc
tgtcgaaccggtgtcactggtatcttctgtgacgagtgtgccgtcggttacagctcagag
ttcccggcctgtaaggagtgccacccctgcaccatcctttggactgaaaatgtcactgat
gtccagcgagctgcccaaaggatgagaaccttcatccctcgccatggcgacaatctgcgc
cccagagacagtcaccacagacaacggatgctggagatgcactccaaactggacaggctt
accaatctgacaggactgtccctgccgaaggtggagaaggtggagaaactgtgcatgaag
attaggaagctgaaagatgccatcgacccgaacacgatcctcattgatctgtctcctctc
ctcaacactgaaattgacaacattggtttggagttcaagaagctactgaacagcttgaag
gaaaaactaatcaaggatccagatgatgaagataaaggggacctggaagagctcctggat
gagatccaaaagcttcataaagacttcatgtcagatgaaaagaaggtaagaaacgccaac
aaagctttagaggactccatggacaccagaaaggaagttaaacacaaactgagcacgtgc
agcagcagtggagatctgacgccaatggagaagaagatcaaagagctcagtgtggtcaag
ctcaaccagaaggtctgtgggggaccaggtctagacgactgttcaggatgtggtggagct
ctgtgtggtctggatctggggaaaaggaaatgtggaggtccaaactgtgatggagtcatt
tctgtcagtgagagagcttcagaaatggcagagaaagcaaaggaccaactcaacacgctc
ccatctagactggaagaatccaagaacaagatcaatgatgccaaacaggcagctcaagac
accaaagaccaggccaaagacctgcaggaccagatcagcgacaatatagactccttagag
agagagaggagcataaccaggaagctcatccagcaagttaaagactacctgatggatgag
atggttcctccagaagacatcgagaaaatggcccgagctgttctggccatccagctgcca
cgatcacctgctaaaatccaatcaatgatcaatgacatcaataatctgctgtccaacact
atgcacttccagaatgacctgaagaacctggaggagcacgccaagactgcccaggacctg
ctgcagaaagctcaggagctcaaggaacgatcaaaggacattgatgtgtcacagattaac
agagacatttatgaatcagagaaagctcagagcaaagccaatgacgacctggaagcagcc
agccgagacagagacatgaccaaagaccgactcccagacattaaagacaaactggacgac
attgagacaaagctgatgaatcgtcaacatgaaaatctgctaaatgagattgaagctctg
aagaagaaaactgaacagaaccaagagatggccagagacgcccaagaggctgcaacgtcc
tcagctttgaacgctattgacacagcaaaggaactggacaatgcgatgaaactgtttgag
gttttaaaagagaaaaacttgaaccagacggttcagggtgaagctggagaacgactgaag
aaaatcatggaggaggcggagaacatgaagagagaggtggaggacaaactgacacagata
caaggtctggaggagaagatccagcagctgatcaggagtaaggaggaaaaatcagctgaa
gtctcaaagttgttcgaaacagtcgattcacttcgacaggaaatctccaaacgagctgaa
atatatgccacctgtactacgtaa

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