Lates calcarifer (barramundi perch): 108891744
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Entry
108891744 CDS
T04895
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108891744
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108891744
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108891744
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108891744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
PTP_tm
Ig_ILCR1
Interfer-bind
Tc-R-P
PTP-SAK
Ricin_B_lectin
CysR_MRC2_N
DSPc
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
108891744
NCBI-ProteinID:
XP_050929229
UniProt:
A0AAJ8BCG1
LinkDB
All DBs
Position
LG10:complement(122405..145029)
Genome browser
AA seq
2674 aa
AA seq
DB search
MDALTLTVLLLLSSCSVSGFLVMLTPQRLCLITRGQVVILGQCDVTNPAHQWAWTGEAQL
IHAQSSRCLWADPSPHLPGHARLAKLSNCSRAPVWSCSGSEGAFGLAETHLYLRKLGSRV
VVGGDLRSSRWRRYNMDSGGTQLITSLCPDTDSTPHSSIFYSSTQKPVGLSTVSPVTDQF
SVRSIRLRHFTTSDDGGTRPRTRRSVTLNPHLSPSVTELSSVSSSPPESTPDLSESSSVG
AEARTLSGQRLVLTRSSTSDWTETKTLVSGARSGLTFTSEDSTETESTSAASPGSESDHH
HTSAPTTEEETSASPADTATPPPVTTHPPSTLDLTSVTETDPPHTPPAPPSTSQTSPSPP
STPQMLSTHHPETSTTTHTAPPTSPTAGPMSTGGITASAPSVPPTNHTDTPATTTKTTPV
TTPVTTPVTTPVTTPVTTPVTTPVTTPAKTPLTTPVTTPVTTPVTTPVTTPVTTLVTTPA
KTPLTTPVTTPVTTPVTTPLTTPLTTPVTTPVTTPLTTPLTTPLTTPVTTPVTTPLTTPL
TTPVTTPVATPLTTPLTTPVTTPATTPVTTPVTSTTSTTTTTTKVATTPVTTPVTTPLTT
PVTTPVTTPLTTPATTPVTTTASTTTPTTMETATTTKVATTPVTTPVTTITPTTTATTGT
VTSLRMTTITQTTPPTTTARTTTPVQTSCSVNLTETRSGSDSVQLTVTTAGRSCNFSLVT
GDDSRSESTDCDLHGLTGTFICQVWGLDPGTLYRFTVVSRMDGEKSSTSVQTDPVGPARL
EVHVDSSGLSVSWSRSAGHVDWYDVTLEDSVSTRSTRILGSAPPWSAFSSLVPGSLYWVS
VVATAGNRSATPVRTTAATVPSSVRGLQVVSLSSGALWVSWQVGPGRTERIRVLLMDEDG
ILLRNVSLKNTTTSAKLDGLRQGTLYAVTVVTEAVGLQSSASEQAVTVPAAVTDLRLDHN
GSSDRLLASWVSPEGGVDVYLLTLSASGSIPQQRRLTPNVTQVVFEGLTAGRSYDLSVQT
RAGGQSSETRTSGRTVPGRVSALSLSPLGDGRTLRLSWTPPSGDWENYSVLLRNGSGVLM
NQTVGKLIRQFTFSVLGLGLVPGRLYRAEVTVHSGILGNTASCSGRLVPRSVQQLLVRHA
DEASLSIVWSRPLGEWDSFTILLRLVDSAAPVAQRILPWESRECTFNMLTSGRRYTVTVA
TNSGNLSSLASVTAWTSPAQVSRLQVSNLGTTDSLQAQWDRASGDLDSYQVLLVHDSSVI
KNESVDADATDISFHSLRPGALYRVVLTTVRAGLTSRQTVAEGRTVPAAVGEVTVSNNGR
MDFLSVSWRPAAGEVDSYLVTLRDREKTVHTFHVSKSSPECVFNSLVSGRLYNISITSRS
GSFQNHTFVQERTQPSKVQNPTATHAARDDYLRVYWRHAAGDFDLYQVFIKHNNVFLQNQ
TVPKTQSECVFSGLVPGRLYTVLVNTRSGKYETSASTHGRTFPAAVRTLILAGQGTEDLK
VTWSAAPGDVDHYEVQLLFNDMKVFPPVTLGSGVGECVLSSLTPGRLYKILVSTFSGPNQ
QAQFIEGRTVPSKVKNIHVSNSGDSSSLKVSWTPGQGDVDGYSVFLFRDSRQLDVRRVLK
HQNEVMFGSLQPGQLYGVTVQSVSGELVNNNTASGRTVPSAVTGLQVDNLHTTCSLQVNW
QEALGVADGYILQVLDDRGSLVTNCSQPSGHTSHRFDGLTPGKKYRVLVQTTSGGVHSLG
VSTEARTRPAAVTDLSIKANTTTSLSFLWSPPEGDFELYEILLFNGDDSLREKRPVPSSH
QQYSFQGLRPGAPYRVVVLTHSGEQTNQSSIWARTVPAAVLSLRAQSGNQSGTLWVNWDR
GGGDLSGYLLSLYDPDGSQRAEQHLGSEVTEFVFSGLVPGRLYRAEVLSLSEELSNRAGT
LGRTAPRPPTSFLFGGVTNTSLEITWSGPVDSDYDDFDLQWTPEDQLSVINPYHSRTSGS
RILRGMFPGRLYTFSLRTISGATEPGATSTYSTPIHKKIRTKPERVHSLHCHPESSTSIS
CSWAPPVADYDSYTVECLHQDSQTLVYSRRTRRNSTSYVITQLEPHKCYTVSVKVISDTA
TSEEAQESVVTMIDRPPVPPLSTRVSDKSTVITKSSIVFRFNCSWFSDVNGAIRFFTVVV
TESEGVDNLQPRQQHPLPSYVDYKSNSSVKSYQTSFFPSHCSQGPDPPHSFEVSVGTGMK
MLGGTCERRNADPETSRHLNQFCDGPLKPKTAYRISVRAFTQLFDEEDHDLTVASPLFTD
TYLSLPMVTGAEPLSGVIEGVSAGLFLIAVMISVTVLLVCRHKAHKVVEDQEVRMSVRRE
RATSGGQLGVRGNRRIASPIKIMNFESHYNTLQADSNYLLSGEYEDLKDVGRNQPLDSAL
LPENRGKNRYNNILPYDSTRVKLSYVDDDPCSDYINASYVPGTNFRREYIATQGPLPGTK
DDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPFDQDPLYYGDLIVQMLSESVLPEWTI
REFNICSEEQLRFSRLVRQFHYTVWPDHGVPETTQSLIQFVRTVRDYINRTPGSGPTVVH
CSAGVGRTGTFIVLDRVLQQLDSRDSVDIYGSVFDLRLHRSHMVQTECQYMYLHQCVRDV
LRARKLRSEQENLLCPVYENVNYHAQRETLSTRR
NT seq
8025 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctgactctgactgtactcctgctcctcagctcctgctccgtctctggattc
ctcgtcatgctgaccccccagaggttgtgtttgataacgcgaggtcaggtcgtcatcctg
ggacaatgtgatgtcactaatccagctcatcagtgggcgtggacaggtgaggcccagttg
atccacgctcagtcctccaggtgtctctgggccgatcccagccctcacctgccgggccac
gcccgccttgccaaactcagcaactgcagcagagcgccggtgtggagctgctccggcagc
gagggagcattcggattggccgagactcacctgtatctgaggaaactggggtcccgggtg
gtggtgggaggagacctgcggagctccaggtggaggaggtacaacatggactcaggaggg
actcagctgatcacgtctttatgtcctgacacagactccaccccccactcctccatcttt
tactcctccactcagaaacctgtggggcttagcactgtcagtcctgtgacggatcagttc
tcagtgaggagcatcagactgagacacttcaccacctctgatgacggtggaaccagacct
cggaccaggaggtcggtcacattaaatcctcatctctctccttcagtcacggagctcagc
agtgtctcttccagtccacctgagtccacccctgacctatcagagagctcgtctgttggg
gccgaggccaggactttgtcaggacaaagacttgtcctcaccaggtcctccacctcggac
tggaccgagaccaagactctggtctcaggagccagatctggtctcacgttcacgtccgag
gattcgactgagaccgagtccacgtcagctgcttcacctggttctgagtcagaccaccat
cacacatctgctccaacaactgaggaggagaccagcgcttcacctgcagacacagctaca
cctccacctgtcaccactcatccaccctctacacttgacctgacgtctgtcacagagact
gatccaccacacacacctccagctccgccctccacgtcccagacttcaccttcacctccc
tccacaccgcagatgctctccacccatcatccagagacctccaccaccactcacactgct
ccacccacatctccaacagctgggccgatgtctacaggagggatcaccgcctcagcacca
tctgtcccaccaaccaatcacacagatacacctgcaaccacaaccaaaaccacacctgtg
accacacctgtgaccacacctgtgaccacacctgtgaccacacctgtaaccacacctgtg
actacacctgtgaccacacctgctaagacacctctgaccacacctgtaaccacacctgta
accacacctgtgaccacacctgtaaccacacctgtgactacacttgtgaccacacctgct
aagacacctctgaccacacctgtaaccacacctgtaaccacacctgtaaccacacctctg
accacacctctgaccacacctgtaaccacacctgtaaccacacctctgaccacacctctg
accacacctctgaccacacctgtaaccacacctgtaaccacacctctgaccacacctctg
accacacctgtaaccacacctgtagccacacctctgaccacacctctgaccacacctgta
accacacctgctaccacacctgtgaccacacctgtaacctcaaccacatccactacaact
accacaaccaaagttgccaccacacctgtaaccacacctgtgaccacacctctgaccaca
cctgtaaccacacctgtaaccacacctctgaccacacctgctaccacacctgtaaccaca
accgcatccactacaactcctacaaccatggaaactgccaccacaaccaaagttgccacc
acacctgtaactacacctgtgaccaccatcactcctacgacgacagcaaccacaggaact
gtaacatccctcaggatgacgaccatcacccagaccactccacccaccaccacggccaga
acaaccacacctgtgcagacctcctgctcagtgaacctgacagagaccaggtctggttca
gactcggtccagctgacggtgaccaccgccggtcggtcctgtaacttcagcctggtcact
ggggacgactccaggtccgagtccacagactgtgacctgcacggactcaccgggaccttc
atctgtcaagtctggggtctggacccggggactctgtaccggttcacggtggtttccagg
atggacggagagaagagcagcacatcggtacagacagacccagttggtccggctcgtctg
gaggtccatgtggactcttcaggtctgagtgtgtcctggtctcgctctgccggtcatgta
gactggtacgatgtgactctggaggactccgtatccacccgcagcaccaggatcctggga
tctgcccccccctggtctgcattcagttctctggtccctggttctctgtactgggtcagt
gtggtggctacagctgggaacaggagcgccacacctgtccgcaccacggcagctacagtc
ccttcctccgtccgcggcctccaggtggtgtccttgtcctcaggtgccctctgggtctcc
tggcaggtgggtccgggcagaactgagcggatcagggttctgctgatggacgaggacggg
attctgttgaggaacgtcagtctgaagaacacgacaacctcggccaagctggacgggctg
cggcaggggaccctgtatgctgtcaccgtggtaacagaggccgtcggcctgcagagctcc
gcctccgaacaggccgtcacagtccctgcagctgtgacagatctgaggctggatcacaac
ggcagctcagaccgtctgctggcctcctgggtctcacctgaggggggtgtagacgtctac
ctgctcaccctgtcggcttcgggatcgatcccccagcagcgccgcctcacccccaatgtc
acccaggtggtgtttgagggtctgactgcgggtcgcagctatgatctgtcagttcagacc
agagctggaggacagagttcagagaccaggacctcagggaggacagtgccgggccgggtg
tcggctctctccctgtctcctctcggtgacggcaggactctgaggctcagctggacgccc
ccctcaggtgactgggagaactacagcgtcctactgaggaacggctcaggggtcctgatg
aaccagaccgtcggtaaactgatacgacagttcaccttctccgtcctcggcctcggcctg
gtgccaggacgactctacagggcagaggtcacggttcacagcggcattctgggtaacaca
gcgtcatgctccggacgactggttcctcgctccgtgcagcagctgctcgtccgccacgcc
gatgaagcgtctctgagcatcgtgtggagtcgacctctcggcgagtgggacagcttcacc
atactgctcagactggtggactccgctgccccagtggctcagaggatcctcccctgggag
tccagagagtgcaccttcaacatgctcacctcaggacgccgctacaccgtcactgtggcg
accaacagtggaaacctgagcagcttggcctccgtgacagcgtggaccagtccggctcag
gtcagcaggctgcaggtctctaacctcggcaccaccgacagccttcaggctcagtgggac
cgggcctctggggacctggactcttatcaggtcctgctggtccacgacagcagtgtcatt
aagaacgagagcgtggacgctgacgccactgacatcagcttccactctctgagacctggc
gctctgtacagggtggtgttaaccaccgtcagagctggactcacgtccagacagacggtg
gcagagggacgcaccgtcccagctgccgtgggtgaggtgacggtcagtaataacggtcga
atggacttcctgagcgtgtcgtggcgtccggctgcaggtgaggtggatagttacctggtg
actctgagggaccgggagaagacggttcacacttttcacgtttctaaatccagtcctgag
tgtgtttttaactctctggtgtccggacgcctctacaacatctccatcacctcccgcagc
ggcagcttccagaaccacaccttcgtccaggagagaacacagccatcaaaggtccagaac
ccgacggcaacccacgccgcccgggacgactacctgagggtttactggcgtcacgcggct
ggagactttgacctgtaccaggtgttcatcaaacacaacaacgtgtttctgcagaaccag
acagtgccgaagacccagagtgagtgtgtgttcagcggcctggtgcccggcagactctac
actgtgctggtcaacacccgcagcgggaagtatgaaaccagcgcctccacccacggcagg
accttcccagcagcagtccggaccctgatcctggccgggcagggaacagaggacctgaag
gtaacgtggtcagcggctccaggtgacgtggatcactatgaggtgcagttactgttcaat
gacatgaaggtgtttcctcccgtgaccctgggcagcggcgtgggtgagtgcgtcctatca
tcgctcacacctggacgactttacaagatcctggtttcaaccttcagcggcccaaaccaa
caggcccagttcatcgagggacgcacagttcccagtaaagtgaagaacatccacgtcagt
aacagtggtgacagcagcagtctgaaggttagctggactccaggtcagggcgacgtggac
gggtactcagtgtttctgttcagagacagccgacagctcgacgttcgccgagtcctcaaa
caccagaacgaggtgatgtttggctcgctgcagccgggacagttgtacggtgtgacagtg
caatcggtgagcggagagctggtcaacaacaacacggcttcaggtcgcacagtcccctca
gcagtgacggggctccaggtggataacctccacaccacctgcagcctccaggtgaactgg
caggaagctctgggcgtggctgacggatacatcctgcaggttctggacgacagaggcagt
ctggtgacaaactgctctcagccctctggacacaccagccacaggttcgatggcctcacc
ccaggaaagaagtacagagtcctggtccagaccaccagcgggggggtccacagcttgggc
gtcagcaccgaagctcggacacgccctgcagctgtcaccgacctgtccattaaagccaac
accaccaccagcctgtccttcctctggtctccaccagagggagactttgagctgtacgag
atcttgttgtttaacggagacgactcgctgagggagaaacgaccagttccgtccagccat
cagcagtattccttccagggtctcagacctggagctccctacagggtggtggtcctgact
cacagcggggagcagaccaaccagtcctccatctgggccaggacagtcccagcagccgtc
ctgtctctcagggctcagagtggaaaccagtctggtactctgtgggtgaactgggatcgt
ggtggtggcgatctgagtgggtacctactgtctctctacgaccccgacggttcccagcgg
gccgagcagcacttggggtcagaggtcaccgagttcgtcttctcaggcctggtcccaggt
cgattgtaccgagctgaggtgctgagtctgagtgaagagctgagcaacagagcggggact
ctgggtcggaccgctcccagacctccgacctccttcctgttcgggggggtcaccaacacc
tccctggagatcacgtggagcggccccgtggactcagactatgatgacttcgacctgcag
tggactcctgaggaccagctgtctgtcatcaatccatatcacagccggacgtccggcagc
cgaatcctgagggggatgttccctgggcgactctacaccttcagcctccgcaccatcagc
ggcgccacggagcccggggccacatccacctacagcacacccatccacaagaagatccga
accaagccggagcgagttcatagcctccactgtcaccctgagagctccacctccatctcc
tgctcctgggcgcctccagtggccgactatgactcctacactgttgagtgtctccaccag
gactcacagaccctggtctactccagacgcaccagacgcaactccacctcctacgtcatc
acccagctggagccccacaaatgctacaccgtttctgtgaaggtgatctcagacacggca
accagtgaggaggctcaggagagcgtggtcaccatgattgaccgtcctccagtgcccccc
ctcagcacccgggtcagcgataagtccaccgtgatcaccaagtcctccatcgtcttcagg
tttaactgcagctggttcagtgacgtcaacggagccatcaggttcttcactgtggtggtg
accgagtctgaaggtgttgataacttgcagccgaggcagcagcaccccctgccctcctac
gtggactataaatccaactcctctgtcaagtcctaccagaccagtttcttccccagtcac
tgcagccagggccccgaccccccccacagcttcgaggtcagcgtggggacggggatgaag
atgctgggggggacctgcgaacgcagaaatgcagatccagagaccagcagacacctgaac
cagttctgtgacggtccactgaaacctaaaactgcctacaggatcagtgttcgagctttt
actcaactgtttgatgaagaggaccatgacttaaccgtcgcctctcctctgttcactgac
acctacctgtcgctgcccatggttaccggggctgagcctctgagtggagtcattgaaggt
gtcagcgccggtctgttcctcatcgccgtgatgatcagtgtcaccgttctgcttgtctgc
agacacaaggctcacaaagtagtggaggatcaggaggtcaggatgagtgtgaggagagag
agagcgacatcaggaggtcagctgggggtcagaggcaaccgtcgtattgccagtcccatc
aagatcatgaactttgagtctcactacaacacacttcaggcagactccaactacctgctg
tcaggggagtacgaggatttgaaggacgttggccggaatcaacctctggactcagctctg
ctgccagagaaccgagggaagaaccgctacaacaacatcctgccttacgactccaccaga
gtgaaactgtcttacgtagatgatgatccctgctctgactacatcaatgccagctacgtc
cctgggactaacttccggagggagtacattgccactcagggccctctgccgggaactaaa
gacgatttctggaagatggtctgggagcagaacgtccacaacatcgtgatggtcactcag
tgtgtggagaaaggaagggtgaagtgtgatcactactggccctttgaccaggatcctctg
tactacggagacctgatcgtccagatgttgtcagagtctgttctgcctgagtggacgatt
cgagagttcaacatctgcagcgaggagcagctcagattcagtcgtctggttcgtcagttc
cactacaccgtgtggcccgatcacggagtcccagaaaccacccagtccctaatccaattt
gtccgaaccgtcagggactacatcaacaggacccctggatctggacccaccgtggtccac
tgcagcgctggtgtgggtcggactgggaccttcatagttctggatcgagtgctgcagcag
ctggactccagagactctgtggatatctacggctctgtctttgacctgagacttcaccga
tcacacatggtgcagacggagtgtcagtacatgtacctccatcagtgtgtcagagatgtg
ctgagagccaggaagctgcgcagcgaacaggagaacctactctgcccggtctatgagaat
gtgaattaccacgctcagagagagacgctgagcaccaggcgctaa
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integrated database retrieval system
