KEGG   Lates calcarifer (barramundi perch): 108891746
Entry
108891746         CDS       T04895                                 
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
  KO
K05636  laminin, beta 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04510  Focal adhesion
lcf04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108891746 (lamb1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108891746 (lamb1a)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C ATG17_like Laminin_II
Other DBs
NCBI-GeneID: 108891746
NCBI-ProteinID: XP_018544570
UniProt: A0AAJ7Q204
LinkDB
Position
LG10:complement(18845..48580)
AA seq 1799 aa
MLELQLAVLLALQVCTCAQEGGASVGGDLDDVGLPELSDVCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLNRPEPFCIVSHLQEEKKCFVCDSAAAYDELTNHTSSHRIENVVTTFAPNRL
KTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAY
DCETSFSHVSQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNML
KITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIQGAGQ
TREGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDM
AVFMASGNVSGGVCDNCQHNTAGHNCEQCKPFYYQHPERDVRDPNICQACNCDPLGSLNG
GTCDRMTDVRAGLIAGQCRCKVNVEGERCERCKQAYYGLSDDPEGCKACTCSPVGTVPGG
NPCDSETGSCFCKRLVTGQDCDQCVSEHWGLSNDMDGCRPCDCDLGGAVNNQCDQVSGQC
ICRDHMFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVPRPHPQDRSPTWTGIGLV
NVPEGAFLEFSVDNIPHSMEYDIIIRYEPQLPDQWEEVLMTVMRPGPVRADSRCINTVPD
DDNQMISLHPGSRYVVLPRPVCFESGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHC
KNLDIFTASEGGDSSGNSGWETFQRYRCLENSQSVVKTPMTDICRNFIFSISAMLHQGAK
ECQCDPQGSLSTVCDPSGGQCQCRSNVVGRNCDRCAPATFQFGPNGCRACACDPQGSQSQ
FCDQLTGQCVCVPGAYGRQCDRCLPGHWGFPACRHCSCNGHADSCDPNTGYCIDCKDHST
GHSCDRCLDGYYGDPVLGSGDHCRPCMCPDGPGSQRQFAGSCYRSDNSQQAICVCNTGYR
GARCDECSPGYYGNPGEPGGQCQPCQCNSNIDMLDPESCDAQTGECLRCLYHSEGVACHS
CKLGYYGNALLQDCRKCVCNQLGSDPSSCPSSGDCHCDRSSGQCHCLPNVVGQHCDRCAP
DTWNMASGRGCQTCDCDPKHSYGTSCNEISGQCSCHPGFGGRTCSECRELFWGDPEIKCH
ACDCDPHGISEQQCNKVSGHCVCVDGVSGPRCDVCARGFSGTFPDCHRCHQCFAEWDNII
GQLTNQTHRLVNKVNAIKASGVSGPYKKSIDSMEKSMADIRVLLNQNPASQPLTEIQHLL
QQASDLMRALSQMLNDTEQTLDRVEHLNSAAETKLDSVSSDAQKLERTVQELLDQVEFIK
NSDIRGATDSITKYFLQSQEAEARANASTTDAGSPVQTSGTLRQLTEDKLNRTREEFLRR
HMEHAQRLDDLAGELQTLDLSEISHKTCGSPLPGQDLCSSSSCGGLGCVDSQGRTRCGGE
GCDGVVTMANSLWRKAQDSEQEIISTMGEVEKLSKMVSEAKLKADEAKLSAQDVLMKTNR
TKQRVDQSNEELRSLIKQIRDFLTQDVADLESIELVANEVLAMQMPTTPAQLQNLTEEIR
QKVGELGHVETILQQSADDIQRAENLLDQARRASEEAADVKDSAEKVKRALEEAQRAQTA
ASSAIQQAAADIQNTNNLLSSVQSETADAESKLNNATQRLQRLEQEVTLLRDKALNVSLS
TEQTNQDAASIRKVAEEVQKDLDSDLKDKYATVGQLIDQKAGGVADAKKRAESLQQEAKE
LLLQASDKLQLLKDLEKSYKDNQQTLEVKAEQLVELEANVKELLQEISHKVTVYSTCLF
NT seq 5400 nt   +upstreamnt  +downstreamnt
atgttggagcttcagctcgcggtgctgctcgctctacaggtgtgtacttgtgctcaggag
ggcggggcctcggtgggcggggacctggatgatgtcggcctcccggaactcagtgacgtc
tgcaccgagggcagctgttacccagcaacaggagaccttctgattggccgagctcaccag
ctgtcatccacctccacctgtggtctgaaccgaccagaaccgttctgcatcgtcagccac
ctgcaggaagagaagaagtgttttgtgtgcgactctgcggcagcctacgatgaactgacc
aatcacacgagcagccatcgtatcgagaacgttgtcacaacgtttgctccaaacagactg
aagacgtggtggcagtctgagaatggtctggagaatgtcaccatccagctgaacctggag
gcagagtttcacttcacacacctcatcatgactttcaagacatttcgtcctgctgccatg
gtgatcgagcggtcagcggactttgggaagacgtggcaggtttatcgttactttgcctac
gactgtgagacgtccttctcccatgtttcccagggtccaatgcagaaggtcgatgatgtc
atctgtgactcacgttactccgacattgaaccatccactgagggagaggtgattttcaga
gttttggacccagcgttcaggatcgacgacccctacagccccaggatccagaacatgttg
aagatcaccaacctgcgggtgaagttcaccaaactgcacacgctcggagacaatctgctg
gactctcgtatggagattaaagagaagtattactatgccatctacgacatggtggtcaga
ggaaactgcttctgctatggacacgcctctgagtgtgcccccatccagggggctggacag
accagggagggcatggttcatggtcactgcatgtgtaaccacaacactaaaggtctgaac
tgtgaacagtgtcaggatttctaccatgaccttccctggagaccagctgagggacgcaac
accaatgcctgcaagaagtgcaactgtaaccagcactcagactcctgtcacttcgacatg
gccgtgttcatggcttcaggaaatgtcagtggaggcgtttgtgacaactgtcaacacaac
acagccggacacaactgtgagcagtgtaaaccattttactaccaacatccagagagagat
gttagagaccccaacatctgccaggcctgtaactgtgaccccctgggctctctgaatgga
ggaacatgtgaccggatgacggatgttcgagccggtctgatcgctggtcagtgtcgctgt
aaagtcaatgtggagggagagcgctgcgagcgctgcaaacaggcgtattacgggctgagt
gacgatcctgaaggctgtaaagcctgcacctgcagccctgtaggaacagttcctggagga
aatccttgcgacagtgaaacaggaagttgtttctgtaaacgtttggtgaccggacaagac
tgtgaccaatgtgtgtctgaacactggggtctcagtaatgatatggacggctgcagacca
tgtgactgtgacctcggaggagccgtcaataatcagtgtgaccaggtgagtggtcagtgc
atctgcagagatcacatgttcggtcgtcgctgcgatcaggttgagtctggattctacttc
attgctctggaccattatacctacgaggcagaggatgccaaatttggacctggagtgaca
gtggtgccaaggccccacccacaggaccgcagtcccacctggacaggtattggcctggtc
aatgtcccagagggggccttcctggaattctctgtggacaacatccctcactccatggag
tacgacattatcatccgctatgaacctcagctgcctgaccaatgggaggaggtcctgatg
accgtgatgaggcctggaccagtcagagcagacagccgctgtattaacactgtacctgat
gacgacaaccaaatgatctctcttcaccctggctcacggtatgtggttcttcccagacca
gtttgttttgaatctggtctgaactacacagtccgcctcagtctaccgctgtactcagcc
ctcagcgatgtccagtctccgtacacgctcatcgactcgatcgtgttgatgccacattgt
aagaacctggatatcttcactgcttcagaaggaggagactccagcgggaacagcggttgg
gaaactttccagcgttatcgttgtttagagaacagccagagtgttgtcaagacaccgatg
acagacatctgcagaaacttcattttcagcatctctgccatgttgcaccagggagctaaa
gaatgccagtgtgaccctcagggctccctcagcaccgtgtgtgaccccagtgggggtcaa
tgtcagtgtcgctccaatgtggttggcaggaactgtgacagatgtgctccagccacattc
cagttcggacccaacggctgcagagcatgtgcatgtgaccctcagggttcacagagtcag
ttttgtgatcagctcactggtcagtgtgtttgcgttccgggagcatatggtcgacagtgt
gatcgctgtctgccgggtcattggggtttccccgcctgccgacactgctcctgcaatgga
cacgctgacagctgtgaccccaacactgggtactgcatcgactgcaaggaccacagcacc
ggacacagctgtgacaggtgtctggatggttactatggtgacccggtattggggtcaggt
gaccactgtcgtccctgcatgtgtcctgatggccccggcagccagcggcagtttgcagga
agttgttaccgcagcgacaactcccagcaggccatctgtgtctgcaacaccggatacaga
ggtgctcgctgtgatgagtgctcacctggttactatggaaaccctggtgaaccggggggt
caatgtcagccctgtcagtgcaacagcaacatcgacatgttggacccagagtcttgcgat
gctcaaactggcgagtgtctgcgctgcctataccacagcgagggcgtcgcctgccacagc
tgcaaactgggttactatggcaatgctctgctgcaggactgcaggaagtgtgtttgtaat
cagctgggcagcgatccctccagctgtccatcatctggcgactgtcactgtgaccgcagc
agcggtcagtgtcactgcctcccgaacgtggtcggtcaacactgtgaccgctgtgcgccc
gacacctggaacatggcaagtggccgtggctgtcagacctgcgactgtgaccccaaacac
tcgtatgggacatcctgcaatgagatcagtggtcagtgttcctgtcaccccggctttgga
ggaagaacatgcagcgagtgtagagagcttttctggggagacccagagatcaaatgtcac
gcgtgcgactgtgaccctcacggtatctccgagcagcagtgtaacaaagtcagcggtcac
tgtgtctgtgttgacggtgtgtccggacctcgctgtgatgtctgcgcccgtggattctct
ggaaccttccctgactgccaccgctgccaccagtgcttcgctgagtgggacaacattatt
ggtcagctgaccaatcagacgcaccgcctcgtcaacaaggtcaacgccattaaagctagc
ggagtcagtggaccatacaagaagtccattgacagcatggagaagagcatggccgacatc
cgggtcctcctgaaccagaacccggcttcgcaaccactgaccgagatccagcacctgctg
cagcaggccagtgatctgatgagggccctgagccagatgttaaatgacacagaacagact
ctggaccgggtggaacacctgaactcagctgcagaaactaaactggactctgtgtcatcg
gacgcacagaaactggagcgaacagttcaggagctgctggatcaggtcgagttcatcaaa
aactctgacatcagaggggcgacagacagcatcactaagtactttctgcagtctcaggaa
gctgaagctcgagccaacgcctccaccactgatgccggcagccctgtgcaaacctccggc
actcttcggcaactcacagaggacaaactgaaccgaaccagagaggagttcctgaggaga
cacatggagcatgctcagagattggatgacttggcaggagagctgcagactctggacctg
tcagagatcagtcataagacctgcggaagtccattaccgggtcaggatttgtgctcgtcc
tcttcctgtggaggtctgggctgtgttgactctcagggtcggaccaggtgtggaggtgaa
ggatgtgacggtgtggtgacaatggccaacagcctctggaggaaggctcaagattcagaa
caggaaatcatcagcaccatgggggaggtggaaaaactttccaagatggtgtcagaggcc
aagctaaaggcagatgaggcaaagcttagtgctcaggacgtcctgatgaagaccaacaga
accaaacaaagagtcgaccagagtaacgaggagctaagaagtctcatcaaacagatcaga
gactttctaacacaggatgttgcagacctagagagcattgagctggtggcgaatgaggtt
ctggccatgcagatgccaaccacgccagctcagctgcagaacctgactgaggagattcgg
cagaaggtgggagaactaggacacgtggagaccatcctgcagcagagtgctgatgacatc
cagagagccgagaacctgctggaccaggcccgtcgagccagtgaggaagcagctgatgtg
aaggactccgcagagaaggtgaagcgagctctggaggaagctcagagagctcagacagct
gccagcagcgcaatccagcaggctgccgctgatatccagaacaccaacaacctgctgtcc
tctgtgcagtcagagacggcagatgcagagtcaaaactcaataatgccacccagaggctg
cagaggctcgagcaggaagtaacgctgctgagagacaaagctctgaatgtctctcttagc
acagaacagaccaatcaagacgcagcgagtatcagaaaggtcgctgaggaggtccagaaa
gacctggactcagacctgaaggataagtacgccacagtggggcagctgatagatcagaag
gcagggggtgtcgctgatgccaagaagagggcggaatcgctgcagcaggaagccaaagag
ttgttgttgcaggcaagcgacaagctgcagctgctcaaagatctggagaagtcgtacaaa
gacaaccagcagactctggaggtgaaggcagagcaactggtagaactggaggccaatgtg
aaggagctgctgcaggagatcagccacaaggtcaccgtctacagcacctgtctgttctag

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