Lates calcarifer (barramundi perch): 108891748
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Entry
108891748 CDS
T04895
Name
(RefSeq) protein NLRC3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108891748
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108891748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
AFG1_ATPase
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108891748
NCBI-ProteinID:
XP_018544572
UniProt:
A0AAJ7Q1Z1
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MNQSEDREEGVPPSKTTLCGEHESKTKAQRKQQQRPDSPEPSCLSMKSDGSMGRLINFKD
DQPADGRKQQQRPDSPEPSCLSMKSDGSMIEPINFKDDQPADGRVQQQSSEVHSDQSAQQ
HQPDLDSILMLLEENIITFVKKELKRVQRVLRPDYPECLESQREDEEVLDGEDEEQRRSS
REEFLKITVNFLRRMKQEELADCLQSKIHAAVCQHKLRSNLKKKFQCLFEGISKAGNPTL
LNQIYTELYITEGGTGEVSDEHEVRQIETASRKPDRPETTIRQEDIFKASPGRDEPIRTV
MTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKFSLVELVHHFFT
ETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLP
SARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEDQASRIISHIKTSR
SLHIMCHIPVFCWITATVLEDVLKTREGEELPKTLTQMYIHFLVVQTKLKNVKYDGRGER
DPHWSPETRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEER
GLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMSEEQSSYWLIGLFSSLRSKVFPDK
PEPAHLYQSVVDKALQSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSGSQTNQETVQ
YIKKKISENLSPEKSINLFHCLNELNDRSLVNEIRWHLRSRSLSTDELSPAQWSALVFIL
LSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSS
LRDLDLSNNDLQDSGVKKLSAGLKSSHCSLETLSLSGCLITEEGCASLASALRSNPSHLR
ELDLSYNHPGDSGVKLLSAGLEDPDWILATLKVDHGGEQRLKPGLRKYACELEVDTNTVN
RFLKLSDNNRKVTWGEDQSYPDHPDRFDHWPQLLCRTGLTGRCYWEVEWRGLVYISVSYR
GIRRKGSSNDCLFGRNDQSWSLSCSDGRYSVWHNNRGTSITSSSSVSNRVAVYVDCPAGS
LSFYRVSSDKLIHLYTFNTIFTEPLYPGFWIWSLGSSVSLCDL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaacacgagagcaagaccaaagctcagaggaagcagcagcagagaccagactctcctgaa
cccagctgtctgtccatgaagagtgacgggtctatgggtcgtcttattaactttaaagat
gatcaacctgctgatggaaggaagcagcagcagagaccagactctcctgaacccagctgt
ctgtccatgaagagtgacgggtctatgattgaacctattaactttaaagatgatcaacct
gctgatggaagagttcagcagcagagctcagaggtccacagtgatcagtctgcccagcag
catcaaccagacctggactccatattgatgctgctggaggagaacatcatcacttttgtg
aagaaggagctaaagagagttcagagggtcctgagaccagattacccagaatgcttagag
agtcagagggaggatgaggaggtgttggacggtgaggatgaagagcagaggaggagcagc
agagaggagtttctgaagatcacagtgaacttcctgaggagaatgaagcaggaggagctg
gctgactgtctgcagagcaaaattcatgctgcagtttgtcaacataaactcaggtcaaac
ctgaagaagaagttccagtgtttgtttgaggggatctctaaagcaggaaacccaaccctt
ctgaatcagatctacacagagctctacatcacagagggagggactggagaggtcagtgat
gaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaacaacc
atcagacaagaagacatctttaaagcctcacctggaagagatgaaccaatcagaacagtg
atgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggac
tgggctgaagacaaagccaaccaggacatacacttcacatttccattcactttcagagag
ctgaatgtgctgaaagagaaaaagttcagcttggtggaacttgttcatcacttctttact
gaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgac
ggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgactgatgtt
acagagtccacctcagtggacgtgctgctgacaaacctcatcagggggaaactgcttccc
tctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgt
gttgacatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcagg
aagaggttcagagatgaggatcaggccagcaggatcatctcccacatcaagacctcacga
agcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggag
gatgtgttgaaaaccagagagggagaagagctgcccaagaccctgactcagatgtacatc
cacttcctggtggttcagaccaaactgaagaacgtcaagtatgatggaagaggtgagaga
gatccacactggagtccagagaccaggaagatgattgagtctctgggaaaactggctttt
gagcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagaatgtggcatc
gatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagaga
ggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggct
gctcttcatgtccatctgaccttcatcaactctggagtcaatctgatgtcagaggaacaa
tcatcatactggttaattggacttttctcctccttgcggtctaaagtcttcccagacaaa
cctgaaccagcacatctctaccagagtgttgtggacaaggccttacagagtccaaatgga
cacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagactctc
ctacgaggtctgctgacacagacaggaagtggctcacagaccaatcaggaaacagtccag
tacattaagaagaagatcagtgagaatctgtctccagagaaaagcatcaacctgttccac
tgtctgaatgaactgaatgatcgttctctagttaatgagatccgatggcaccttagatca
agaagtctctccacagatgaactgtctcctgctcaatggtcagctctggtcttcatctta
ctgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgcttcagaggag
gctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctgctgagtggctgt
aacctctcagaaagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagt
ctgagagacctggacctgagtaacaatgacctgcaggattcaggagtgaagaagctgtct
gctggactgaagagttcacactgttcactggaaactctcagtctgtcaggttgtctgatc
acagaggaaggctgtgcttctctggcctcagctctgagatccaacccctctcatctgaga
gagctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtctgctgga
ctggaggatccagactggatactggccactctcaaggtggatcatggtggagagcagagg
ttaaaacctggtctcaggaagtacgcctgtgaactggaagtggacacaaacacagtgaac
agattcctcaaactgtctgacaacaacaggaaggtgacatggggagaggatcagtcatat
cctgatcatccagacagatttgatcactggcctcagctgctgtgtagaactggtctgact
ggtcgctgttactgggaggtcgagtggagaggactggtttatatctcagtgagttacaga
ggaatcagaaggaaaggaagcagtaatgactgtttgtttggaagaaatgatcagtcctgg
agtctgagctgctctgatggtcgttactctgtctggcacaataacagaggaacatccatc
acctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggctct
ctgtccttctacagagtctcctctgacaaactgatccacctctacaccttcaacaccata
ttcactgaacctctgtatcctgggttctggatctggtcattgggttcctcagtgtctctg
tgtgatctgtag
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