Lates calcarifer (barramundi perch): 108891792
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Entry
108891792 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3-like
KO
K12490
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108891792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891792
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108891792
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108891792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_6
PH_3
PH_8
Motif
Other DBs
NCBI-GeneID:
108891792
NCBI-ProteinID:
XP_018544626
UniProt:
A0AAJ7Q220
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MLVVMASLDGSTPVETLLAAIHLERYLDIFRQAGLLLARDFTHLDHDAFVSLGITATGHR
KRILRLVSHIQRTEAQRANQKAVTDLPRDRCQSVTDISSSERGCGAAALHQSTGPVNFEA
FRNSSAPNLGAMLTNSDPNGNRVMVKPVPKPRTVFNRRRTAPIHFCPTPDPALPRRLSQE
SICFTVLEGLTSGDTPDNRLTSDLNDKSTSRRPSQVERMRRSLSFSDAGGLLPPVPPRLN
RGVPPSVFKGSPPSSSSPVQTEQNQTHSSLTSGSLDISRLSGSPPSTSPRGGGIEMVSNE
IYWGTLPGSTVPSGGRSYCSQQSAPPTPPRLTPERNSGSTLSNNSSGSARASTDDPEEEI
SPYCETVFQPRRHPHTCESERSRLEGRETRRDEEKHAEDHGSQKFSWTRRLSQALHSGDS
QGYSTVGEPPPPLRCLSLPPXTFPPETDEDLTISPYASYTSLTERAPPIISGWLDKLSPQ
GNYVFQKRYVKFDGKNLMYFGSEKDVYPKGVIPVGAIQMARPAKDNKFEIVTSQRIFVFR
TDSEVLRRRWVSTLQEHVRDQLVFGRRRFGPGSHCQRHGILELKGTKSKVYAAINTDQIW
LYKSEQCFRNGIGITVIEARGATIRDGKHKSFDLITPYKTFSFTAESDREKRDWMEALQE
SIAETLSDYEVAEKIWSNRSNRMCADCKALNPDWASINLCVVICKNCAGQHRGLGTMVSK
VQSLKLDTSVWSNEIVQLFIMLGNDRANDFWAARLSASEELDCDASPEQRREFITQKYRE
GRYRLPHPRFSSQDELLKVLCSAVSEQTLLKTVTQIFSEAESVRLANDSNGCQRHPNLDL
CKPSDPSVYDEIMQPVLHSGFLYKSGSVNRGTLSRKTREDFQKFWCSVDQSLLFYESDRS
ADPCMQISVKDIVCLGISRPDSSNNNNGFIDRFRYTFELYLTSEKLYQFGLETADALHSW
TKAIGKATTPLSCHCLLTREFERVGLLRYRAMLDPQQWKDAYFVLQKSNLFICPRNDGAA
EDIINLNRLQELSITSENENHEKKDILVLVEKGRTLHLQGIGRTDFSLWYSDIQRAAGGK
GNTLREQQLSRNDIPIIVDSCIAFITQYGLGHEGIYRKNGAKSRIKLLMEEFRKDARNVK
LRIGDHFIEDVTDVLKRFFREIDDPIFMADLHPLWQEAAKIPQRIQRLDRYKEIIRSLPR
VNRTTLAALISHLYRVQKCAGLNQMCTKNLSLLFAPSLFQTDGKGEHEVKIVEDLIDNYL
YVFDIDEEHQTQIELEISLITTWKDTQLSQAGDLIIEVYLEMKIPDCCITLKVSPTMCAE
ELTNQVLYMRNVPAGDKDIWMTFEAIEDGQLERPLHPKEKVLEQALQWCKMADPSSAFLV
VKRVPKGEGINILTSYKSDIMKIGLLKCREEPPKLLQGNKFQERTFQIKEHKLLLLKDKK
SIKPEKEWSLKSMKIYIGIRRKLKAPTRWGFTVMSDKHQLFLCCSCEADLWDWITSFLKA
QNDDPGPPVLRRHSSSDISKQKFGTMPLVPIRGDESNSSMLSANQTLRKLHDRRTLSMYF
PMKVQQDSFEERSESPDLPEPLYEEVGDFGLQVLRSLETSFLSSSAAETQEVPDHPPLRL
VPVETGHPDHMIIPDRTASGSVETLEQSGSSGGGGGDGEAECSSPDLNAPQQPAVRRRQQ
LQGVCTPSQELLLQELSSAFTKKTDEEEEEQEQEQERPYDV
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcgtcatggcctccctggatggtagcacgccggttgagacgcttctggcagcg
atccatctggagagatacctggacatcttccgtcaagctggtctcctattggctagagac
tttactcacctggatcatgacgcctttgtcagtctgggaataaccgccacaggacacagg
aagagaatcctacgactggtcagtcacatccagaggactgaagctcaaagagccaatcag
aaagcagtgactgatctcccacgtgaccgctgtcagtctgtgacggacatttcttcttcg
gagcgaggctgtggcgccgctgcgctccatcagtccacgggacccgttaacttcgaggcg
tttaggaacagttcggctccgaaccttggcgccatgttgacgaactcagaccccaatggc
aacagagtcatggtgaagccagttcccaaacccagaactgtcttcaaccgccgcaggact
gcacccatccacttctgtccaacaccagacccagccctgcccaggagactctcccaggag
tccatctgtttcactgtgttagagggtctgacctcaggggatacacctgacaacaggttg
acctctgacctcaacgacaagtcgaccagccgaagaccgagtcaggtggagaggatgagg
cggagtttgtctttttcagacgctggggggttgttacctccagttcccccgaggctgaac
cgcggggtccccccctcagtgttcaaggggtcccctccctcttcttcttcacctgtacaa
acagagcagaaccagactcactcttcactgacttctggtagtctggacatcagcaggctc
tctggatccccaccctccacttcacctagaggaggggggatagagatggtctctaatgag
atctactggggcactttacctggatctactgtccccagtggagggaggagttactgcagc
cagcagtctgctcctccaactccacccagactaactcctgagaggaacagtggcagcact
ttaagtaacaactcttcaggatcagccagagcttcgacagacgaccctgaggaggagatc
agtccatactgtgaaactgttttccaacccagaagacatccacacacctgtgagagtgag
agaagcagactggagggaagagagacaaggagggacgaggagaaacatgcagaggatcat
gggagtcagaagttttcctggacgagacgtttgtctcaggctcttcactccggagactct
cagggttatagcaccgttggagaacctccaccccctctccgctgcctctccctgcccccc
nacaccttccccccagagactgacgaagacctgaccatctccccttacgccagctacacc
tccctgactgagagagccccacccatcatcagcggctggctggacaagctgtctccacag
gggaactatgttttccagaaacgttacgtgaagtttgacggtaaaaacctgatgtacttc
ggcagcgagaaggatgtctatcctaaaggagtcatcccagtgggtgccatccagatggcc
cgcccagccaaagacaataagtttgaaatagtgacgagtcagaggatatttgtgttcagg
actgacagtgaagtgctgaggcggcggtgggtgtccacactgcaggaacatgtcagggat
cagctggtgttcggtcggcggcggttcggtcctggttctcactgtcagagacacggaatc
ctggaactgaagggaaccaagtccaaagtctatgccgccatcaacacggatcagatctgg
ctctacaagagtgaacagtgttttcgtaacggaatcggcatcacagtgatcgaagctcga
ggagcgacaatcagagatggaaagcacaagagctttgacctcatcacaccatataaaacc
ttcagcttcacagcagaatcggaccgagagaagcgggactggatggaggccctgcaggag
tcaatcgcagagactctgtcagattacgaggttgccgagaagatctggtccaaccggtcc
aacaggatgtgtgctgactgcaaggccctgaacccagactgggcctccatcaacctgtgt
gtggtcatctgcaagaactgtgcagggcaacacagaggtctggggacgatggtctctaag
gttcagagtctgaagctggacaccagcgtgtggagcaacgagatcgtccagctgttcatc
atgctggggaacgaccgggccaatgatttctgggcagctcgtctctcggcatcggaggag
ctcgactgtgacgcttcacctgagcagaggagagagttcatcacccagaaatacagagag
ggacgataccgcctcccccaccccaggttcagcagccaggacgagctgctcaaggtcctg
tgctcggcggtctctgaacagactcttttaaaaactgtcactcagattttctctgaggca
gagtcagttcgtctcgccaacgactccaatggctgccagcgacaccccaacctggaccta
tgcaagccgtcagatcccagtgtgtacgatgagatcatgcagcctgttcttcactctggt
ttcctctacaagtctggctccgtcaacagaggaacgctgtccaggaaaactcgagaagac
ttccagaagttctggtgttcggtggaccagtctctgctcttctacgagtcggaccgatca
gctgatccgtgcatgcagataagtgttaaagacattgtgtgtttgggcatcagccggccg
gactcgtccaacaacaacaacggattcatcgacaggtttcgttacacctttgagttgtac
ttgacgtcagagaaactttatcagtttggtttggagacagccgatgctctgcacagctgg
actaaagccatcgggaaggccaccacccccctcagctgccactgtctcctgacccgggag
tttgagcgggttgggctgcttcggtaccgagcaatgttggaccctcagcagtggaaggat
gcctatttcgtcctgcagaagtccaacctcttcatctgtccccgaaacgatggagcggcc
gaggacatcatcaacctgaaccgcctgcaggagctcagtatcacctccgagaacgagaac
cacgagaagaaagacatcctggtcttagtggagaagggaaggactctccacctgcagggc
atcggccggaccgatttctccctgtggtactcggacattcagcgagcagccggcgggaaa
gggaacactctgagagaacagcagctgagcagaaacgacatccccatcatcgtggacagc
tgcatcgccttcatcactcagtatggtctgggccatgaggggatctacaggaagaacgga
gccaagtccaggatcaaactgctgatggaggagtttcgcaaagacgctcgtaacgtcaaa
ctgcggatcggagaccacttcattgaggacgtgacggacgtcctgaagaggttcttcaga
gagatcgacgaccccatctttatggccgacctccacccactgtggcaggaggctgccaaa
atccctcagaggattcagaggttggaccgttacaaagaaatcatccgaagtcttcctcga
gtcaacaggacgacccttgctgctctcatcagtcacctgtacagagtccagaagtgtgcc
ggtctgaaccagatgtgcaccaagaacctgtcgctgctgtttgcgcccagtctgtttcag
accgacgggaagggagaacacgaggtgaagatcgttgaggatctaatagacaactacctg
tatgtctttgatatcgacgaggagcatcagactcagatcgagctggaaatcagcctcatc
accacctggaaggacactcagctgtctcaggctggtgatctgatcatcgaagtttatctg
gagatgaagataccagactgctgcattactctcaaagtgtctcctaccatgtgtgcagag
gagctgaccaatcaggttctgtacatgaggaacgtcccggccggagacaaagacatctgg
atgacgtttgaggccatcgaggacggacagctggagcgtccgttacacccaaaagagaaa
gtcctggagcaggccctgcagtggtgtaagatggccgatccgagctcggcattcctggtg
gtgaagagagttcctaaaggagaaggcattaacatcctcacctcctataagagtgacatc
atgaagatcggtctgttgaagtgtcgtgaagaacctccgaagcttcttcagggaaacaag
ttccaggagagaacgtttcagatcaaggaacacaaactgctgctgctcaaagacaagaag
agcatcaaaccagagaaggagtggtctctgaagtccatgaagatctacatcggcatccgc
aggaaactgaaggctccaaccagatggggtttcacagtgatgtcagacaaacaccagctg
tttctgtgttgtagctgtgaggccgacctgtgggactggatcaccagcttcctcaaagct
cagaacgacgaccccggtcctccggtgctaaggcgtcactcctcatccgatatctccaaa
cagaagttcggcacaatgccgctcgtccccatcagaggagatgagagtaacagcagcatg
ctgtcagccaatcagacgctgagaaagttacatgacagacggacactctccatgtacttt
cccatgaaggttcagcaggactcattcgaggagcgttcggagtctcctgatctccctgag
ccgctctacgaggaggttggagactttggcctccaggtcctcagatctctggagacaagc
ttcctgtccagcagcgctgcagagacccaggaggtcccagaccacccgccgctcagactg
gttcccgtggaaactggacatccggatcacatgatcatccctgaccggacggcgagcggc
tccgtagagactctggagcagagcggcagtagcggaggtggaggaggagatggagaagca
gagtgcagctctccggacctgaacgccccccagcagccggcagtgaggaggaggcagcag
ctgcagggagtctgtactccgtcacaggaactcctcctgcaggagctgtcgtctgctttc
accaagaagacggacgaggaggaggaggaacaagagcaggagcaggagaggccatatgat
gtctga
DBGET
integrated database retrieval system
