Lates calcarifer (barramundi perch): 108891793
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Entry
108891793 CDS
T04895
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891793
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108891793
Endosome - Golgi transport
Rab GTPases and associated proteins
108891793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
108891793
NCBI-ProteinID:
XP_018544627
UniProt:
A0AAJ7Q272
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MWIQPEEVLLAGALWVSERANPFFILQRRRGHGRGGGLSGLLVGTLDVVLDSSARVAPYR
ILLQTADSQIYWNIACGSSRKEITEHWDWLESNLLQTISIFDNDEDVTTFVKGKISGIIA
EENRLKPGEEQEEDCGKFREAELKMRKLFGMPDEEKLVNYYSCSYWKGRVPRQGWLYLSV
NHLCFYSFLLGKEVTLVVQWTEVTQLEKNATLVFPESIRVSTRHTEHFFSMFLNINDTFK
LMEQLANIAMRQLLDNEAFAADRSLPKPCKTLKNVSALKRDLDARAKNERYRAMFRLMQD
ERLDGHTDCTLWTPFAKMHVVGQLFISNNYICFNSREEDLCQLIIPLREVSIVEKADSSS
VLPCPVSISTKNKMNFLFANLKDRDFLVQRISDFLQRTPDSSWGDTSPLSLIGHSAASGV
SSSSSAGSESVHRGRHYHPGLPTASQGLLQLYHRDAPEDLGPKAMKEKMKEEAWNIHFSE
FGRGVCMYRTSRTRELVLNGIPERLRGELWLLFSGAQNEMATHPGYYGDLVEQAMGLCSL
ATEEIERDLHRSMPEHRAFQNETGIAALRRVLTAYAHRNPGIGYCQAMNIVTSVLLLYCT
EEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRAFLPLLYEHMQELGVISTISL
SWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHDNMDALLSCSDEGEAMTILG
RYLDNVVNKQTVAPPIPHLHALLTSGDEPPPEIDIFDLIKSSYEKFGSLRSDVIEQMRFK
QRLKVIQSLEDTAKRSVVRAMMTESAFTIEELEELYCIFKSKHMTSCYWGSSSSAADRHD
PSLPYLEQYRIDPVQFTQLFTALGPWICGGHTPTLSARLFRLLDQNQDGLVNFKEFITGL
SGMYHGDMTEKLKLLYKLHLPPALCPEEAESALEATHFFTEDEPRESSFLSDLDLLGQEV
TSGEEGKEGGGEADKKKEEKVKDYRYYLRMWAKEKEPKRETIKDLPRMNQEQFIELCKTL
YNMFSEEPLEQELYHSIATVASLLLRIGEVGKKFNNGTKKTETAATAQAPPSVQAPPPTQ
APPPDLQREEGPGEGGSGESQVCRALADAQLEPAVLQTSDEETKDDTSVSSYSVVSSGSL
QCEDIADDTVLIGGEQRRGSVLDVDWSITFEQVLASLLTEPPLVDYFERKGDIQSKMAAC
KAQRVVERQISSASDHELTQHSI
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccagccggaggaggtgctgctggccggagctctgtgggtctctgagcgggcc
aacccgttcttcatcctgcagaggaggagggggcacggccgcggggggggactgtccggt
ctcctggttgggactctggatgtggttctggactcgagtgccagagtggctccgtacagg
atcctgcttcagactgcagactctcagatctactggaacatcgcctgtggctcgtccagg
aaggagatcacggagcactgggattggctggagtccaacctgctgcagaccatctccatc
tttgacaacgatgaagatgtcaccaccttcgtcaaggggaagatctctggcatcatcgcg
gaggagaaccggctgaagcctggcgaggagcaagaggaggattgtgggaagtttcgggag
gcggagctgaagatgaggaagctgttcgggatgcctgacgaggagaagctggtgaattat
tactcctgcagctactggaagggacgagtgccgcggcagggctggctttacctatctgtc
aaccacctgtgcttctactcctttctgctgggcaaggaggtgactctggtagtgcagtgg
accgaggtgacccagctggagaagaatgccaccctggtgtttccagagagcattcgtgtc
agcactcgtcacaccgaacatttcttctccatgttcctcaacatcaacgacaccttcaaa
ctcatggagcagctcgcgaacatcgccatgcgccagctgctcgacaacgaagcattcgct
gctgaccgctcgctgcccaaaccctgcaagacgctcaagaatgtctccgcactcaagagg
gacctggatgcccgggcaaagaacgaacggtaccgggcgatgttccgtctgatgcaggac
gagcgtttggacggacacacggactgcacactgtggacgccgttcgctaagatgcacgtg
gtcggacagctgttcatctccaacaactacatctgcttcaacagcagagaggaagacctg
tgtcagctgatcatcccgctcagagaggtgtccatcgtggagaaggcagacagcagcagc
gtcctgccatgccccgtgtccatcagcaccaagaacaaaatgaacttcctgttcgccaac
ctcaaagacagagacttcctggtccagcgaatctccgacttcctgcaacgaacgcccgac
agctcgtggggcgacaccagcccgctgtctctgattggtcactcggcggcctctggcgtc
tcctcctcctcgtctgcaggatcagaatctgtccacagggggcgtcactaccaccctggt
ctgcccacagccagtcagggtctgctgcagctctaccaccgcgacgctccggaggacctg
ggacccaaagccatgaaagagaaaatgaaggaggaggcgtggaacatccatttctcagag
tttggtcgaggtgtctgcatgtaccgaacgtccaggacccgagaactcgtcctgaacggg
atcccagagcgtctgagaggagagctgtggctgctgttctccggagcgcagaacgagatg
gcgactcaccctggttactatggtgacctggtggagcaggccatggggctgtgttcattg
gccacagaggagatcgagcgtgacctccatcgttcgatgcccgagcaccgagccttccag
aatgagacaggcatcgctgcactgcgccgcgtcctcaccgcctacgcccaccgcaaccct
ggcatcggatactgccaggccatgaacatcgtcacctctgtcctgctgctctactgcaca
gaggaagaagctttctggctgttggtggcactgtgtgagcggatgctgcctgactattac
aacaccagggtcgtaggagctctggtggatcagggagtgtttgaggagctgacccgggcc
ttcctccccctgctgtatgaacacatgcaggagctgggagtgatctccaccatcagcctg
tcctggttcctcaccctcttcctgtctgtgatgccgttcgacagcgccgtcctattggtc
gactgctttttctacgagggtatcaaggtcatcttccaggtggcgctggctgtgctccat
gacaacatggatgccctgctgtcctgcagtgacgagggagaagccatgaccatcctgggc
aggtacctggataacgttgtgaataaacagacagtggctccgcccatccctcacctgcat
gccctgctgacaagcggagatgaacctccacctgagatcgacatctttgatctaattaag
tcgtcctatgagaagttcggtagcctgcgctctgatgtcattgagcagatgaggttcaaa
cagaggttaaaggtcatccagtcactggaggacacggccaagaggagcgtggtgagggcg
atgatgacggagtcggccttcaccattgaggaactggaggaactttactgtatctttaag
tccaaacacatgacgagttgttactgggggtccagtagttctgcggccgaccgtcacgat
cccagtttgccgtacctggagcagtaccgcatcgacccggtccagttcactcagctgttc
accgcacttggcccctggatctgtggaggccacacccccaccctgtcagcccgcctcttc
agactcctggaccagaaccaggacggactggtcaacttcaaggagttcatcactggactg
agtgggatgtatcacggagacatgacggagaaactcaaactgttgtataagctccacctc
cctcccgctctgtgtcctgaggaggcagagtctgccctggaggcaacacacttctttact
gaggacgaaccacgagaatcttccttcttgtctgacctggacttgttgggacaggaagtg
acatcaggtgaggagggaaaggaaggaggaggagaagctgacaagaagaaagaggagaag
gtgaaggactacaggtactacctgaggatgtgggccaaagagaaggagcccaagagagag
accatcaaagacctgccccgcatgaaccaggagcagttcattgagttgtgtaagactctg
tacaacatgttcagtgaggagcctctggagcaggagctctatcactccatcgccaccgtc
gccagtttgctgctgcgcatcggagaggtcggcaagaagttcaacaatgggaccaagaag
acagagaccgcggccactgcacaggccccaccctcggttcaggccccacccccgactcag
gctccgccccctgaccttcagagggaggaagggcccggcgaggggggctcaggtgagtcc
caggtatgtcgagctctggccgacgctcagctggagccggcggtccttcagacgtccgac
gaagagaccaaagacgacacgtcggtgtcgtcgtactcggtggtgagctccggctcgctg
cagtgcgaggacatcgccgacgacaccgtgctgatcggcggcgagcagaggcggggcagc
gttctggatgtcgattggtcaatcacctttgagcaggtcctggcgtcgctgctgacggag
ccgccactggtcgactactttgagaggaagggggacatccagagcaagatggccgcctgt
aaggcccagcgggtggtggagcgtcagattagctccgcgtctgaccacgaactcacccag
cactctatctga
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integrated database retrieval system
