Lates calcarifer (barramundi perch): 108891805
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Entry
108891805 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: RING finger protein 4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108891805
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108891805
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108891805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
zf-RING_4
zf-rbx1
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4_4
zf-UDP
Rtf2
TRAF3_RING
zf-RING_11
IBR_1
zf-RING_6
zf-RING_10
zf-RING_16
zf-ANAPC11
Zn_ribbon_6
zf-C3HC4_5
DZR
Motif
Other DBs
NCBI-GeneID:
108891805
NCBI-ProteinID:
XP_018544646
UniProt:
A0AAJ7Q2A5
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MSSSAQRKRRTTGSPLVSRPSNKTNRAGNVRRTANANRAANANRATNRTANVSRTTDGDP
APPTETIDVMDNTEDSVEEVVDLTCEGSEAPVVDLTNNDSVLLVDEGPQNRRVPTGESYI
VSSDEDEDMPPVLNAAVMSSVHTSRSTPGTISCPVCLDSYSEIVDSGRLVVSTKCGHVFC
SQCLRDALTSSHTCPTCRKRLTHRQYHPLYI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctctgctcagaggaagaggaggactacaggaagtcctctggtttccagaccc
agcaacaagaccaacagagcaggcaacgttaggaggacggctaatgctaacagagcagct
aacgctaacagagcaactaacaggacggctaacgttagcagaacaactgatggggaccct
gccccccccacagagaccatcgacgtgatggacaacactgaggacagtgtggaggaggtg
gtggatctgacctgtgaaggatcagaagctccggtggtcgacctcacaaacaacgactcc
gttctgctcgtggatgaaggtcctcagaacagaagagtccccacaggagagagttacatc
gtcagcagtgatgaagatgaggacatgccccctgtcctcaacgccgctgtgatgtcatca
gtacacacctccaggtcgaccccggggacgatcagctgtcccgtctgtctggactcgtac
tctgagattgtcgacagcggccgattggttgtttccactaaatgtggtcacgtgttctgc
agtcagtgtctgagagatgctctgacatcatcacacacctgtcctacctgcaggaagaga
ctcacccaccgccagtaccaccccctctacatctga
DBGET
integrated database retrieval system
