Lates calcarifer (barramundi perch): 108891881
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Entry
108891881 CDS
T04895
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108891881
04082 Neuroactive ligand signaling
108891881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108891881
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108891881
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
108891881
NCBI-ProteinID:
XP_018544737
UniProt:
A0A4W6FJ64
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Position
LG7_2:9521325..9547365
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AA seq
467 aa
AA seq
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MDLHSALNNKVNRISVMARLFLSLLLLCGCQNSLCLSSSEAQKETATNDNSTVFTRILDG
LLDGYDNRLRPGLGENVTEITTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPM
EMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPM
QLEDFPMDAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEDGSRLNQYHLIGQTAGTE
NIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVT
TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKK
ALEAQHPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRTSETKMVDP
KKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGAVTST
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcattcagctctgaacaacaaagtgaacaggatttcagtcatggcgaggctc
ttcctttccctcctgctcctgtgtggatgccaaaacagcctctgcctgtcctcctcagag
gctcagaaggagacagccaccaatgacaacagcacagttttcactaggatcctggacggg
ctccttgatggttacgacaacaggctccggccggggctcggagagaatgtcactgagatc
acgacaaatatttttgtcaccagctttggcccggtgtctgacacggagatggagtacacc
atagacgtcttcttccgtcagagctggaaggacgagcgcctgtgcttcaaagggcccatg
gagatgctgccgttaaacaacctgctggccagcaacatctggacgccagacacctttttc
cttaacggcaagaagtctatcgctcataacatgaccacgcccaacaagctgctgaggctg
aaggatgacggcactttgctttacaccatgagactgaccatatcagcagaatgccccatg
cagctggaggatttccccatggacgcacacgcctgccctctcaagtttggcagctatgcc
tatccagtatcagaggtggtctacacttggactcagggagctgctaagtctgtggtggtg
gcagaggacggctccaggctcaaccagtaccaccttattgggcaaactgctggcacggag
aacatacacacaagcagaggacaatatacagtgatgatggcccacttttacctgaagagg
aagattggatattttgtcatccagacatatatgccctgtttcatgactgtaatcctgtcc
caggtgtcattttggctaaacagagaatcagttcctgcgaggactgtctttggggtgacc
actgtgctgaccatgaccaccctcagcatcagtgccaggaactcgctccctaaagtggcc
tacgctacagccatggactggttcattgccgtctgctacgctttcgtcttttctgccctc
attgagtttgccacagtgaactacttcaccaagaggagctgggcctgggatggcaagaag
gctttggaagcacagcaccctaagaaacgagaccccatggtgctgtcgaaaaagcccaac
aacgtttgctcggcgggtgtgaactataccccgaacctcaccaaggacgtgtccatctcc
acaatctccaatacaacgtcggtgcagctacgaacctctgagaccaagatggtggacccc
aagaagacctacaacagcgtcagcaagatcgacaagatgtcgcggatagtgttccctgtc
ctctttggaaccttcaacctcgtctactgggccacgtaccttaacagagaaccagtggtg
aaaggagctgtcacctcaacgtaa
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