Lates calcarifer (barramundi perch): 108891921
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Entry
108891921 CDS
T04895
Symbol
zbtb16a
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108891921 (zbtb16a)
04121 Ubiquitin system [BR:
lcf04121
]
108891921 (zbtb16a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108891921 (zbtb16a)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108891921 (zbtb16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_8
zf_UBZ
MIX
zf-C2H2_11
zf-C2H2_2
DZR
Motif
Other DBs
NCBI-GeneID:
108891921
NCBI-ProteinID:
XP_018544804
UniProt:
A0A4W6DYU1
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All DBs
Position
LG20:complement(22360678..22498446)
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AA seq
664 aa
AA seq
DB search
MDLTKMGMIQLQNPNHPTALLQKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRSSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDENDVEVNVNDGSTEEDDERKGHNGAKNSKKHSMESPYLSGTQQVSTMSGMV
DQSPSVSTSFGVSTLSPTKAAVDSLMSIGQSLLQQGFGGEQLIHGNSHQLMTEIKTEMMQ
VDMGGNGHDSPQNMESSASSNGERSGEDRNRDGPGTPTRSSVITSARELHYTRDDGMGDH
QAEVSQMGLEAMAGMTEKHLASLYTLPVNHKSDAIMSMPASMASALPMSPALAMSMDFSA
YGGLLPQSFIQREFFSKLGELAVGMKPDGRNQHERCNVCGAELPDNEAVEQHRKMHSGMK
TYGCELCGKSFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQTEESLEAHRQIHTGSDMAI
FCLLCGKRFQTQTALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHPFECE
FCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQ
RSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEDIPPDWRIEKTYLY
LCYV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatttaactaaaatgggtatgatccagctccagaaccccaaccaccccactgccttg
ctgcagaaggccaaccagatgcgtctggccgggactctgtgtgacgtggtcatcatggta
gacagccaggagttccatgctcaccggactgtgctagcctgcaccagcaaaatgtttgag
atcctcttccaccgcagcagccagcattacaccctggactttctttcaccaaagactttt
cagcaaattttggagtatgcttacactgccacgctacaggccaaggtggaggacttagat
gaccttctgtatgcagcagagatcctggaaattgagtatttggaagagcaatgcctcaag
atcttggaaacaatccagtcctcagatgagaatgatgtggaggtcaatgttaatgatggg
agcacagaggaggatgatgagcgcaaaggccacaatggagccaagaactctaaaaagcat
tccatggagagtccctatctgtcaggtacccagcaagtctccaccatgtctggcatggtg
gaccagagtccctcagtctccacctccttcggtgtctccaccctgagtcccaccaaagct
gctgtggacagcctgatgagcatcggccagtctctgctccagcagggctttggtggtgaa
caactcatccatggaaactcccaccaactgatgactgagatcaagactgaaatgatgcaa
gtggacatgggtggcaatgggcacgacagccctcagaacatggagtccagtgcctccagc
aatggagagcgaagtggggaggacaggaaccgagatggtcccggaacaccaaccaggagc
agtgtaatcaccagtgcccgcgagctgcattatacccgcgatgacggcatgggtgaccat
caggctgaagtcagccagatggggcttgaagcaatggctggaatgacagagaaacacctg
gcctccctgtacaccctacctgtcaatcataaatcagatgccatcatgtccatgccggca
tccatggcctctgctctccccatgtccccagccctggctatgtctatggacttcagtgcc
tacgggggactcctgcctcagagcttcatccagagagaattcttcagtaagctcggtgag
ctggcagtgggcatgaaaccagacggcaggaaccagcatgaacgttgtaatgtttgcggt
gcagagctgccagataacgaagctgtggagcagcacaggaagatgcacagcggaatgaag
acctacggctgtgaactgtgtgggaagagcttcctggacagcctccgtctacggatgcat
ttgctgtctcattcagctggtgagaaggccatagtttgtgaccagtgtggcgcccagttc
cagacagaggaatccctggaggctcaccgacagatccacaccgggtcggacatggccatc
ttttgcctgctttgtggtaagcgtttccagacccagacagcgttgcagcagcacatggag
gtccacgctggcgtccgcagctacatttgcagcgaatgcaaccggactttccccagccat
actgcactcaaacgtcacctacgctcacacacagcaggggaccacccatttgaatgcgag
ttctgcgggagctgcttccgtgatgagagcacactgaagggccacaagcgcatccacacc
ggggagaagccctatgaatgtaacggctgtgggaagaagttcagcctcaagcaccagctg
gaaacccactaccgtgtgcacacaggtgagaagccattcgagtgcaagctgtgccaccag
cgatccagggactactcggccatgatcaagcacctgcgcacccacaatggcgcctcgccc
taccaatgcaccatctgcctggagtactgccccagcctgtcagccatgcagaagcacatg
aaaggccacaagcctgaagacatccccccagactggcgcatagagaagacctacctatac
ctctgctatgtctga
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