Lates calcarifer (barramundi perch): 108891997
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Entry
108891997 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: CDK5 regulatory subunit-associated protein 3
KO
K28116
CDK5 regulatory subunit-associated protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891997
Membrane trafficking [BR:
lcf04131
]
Autophagy
ER-phagy
ER-phagy recepters
108891997
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CDK5RAP3
Med15_fungi
Peptidase_C65
CD1375-like
FlgN
LemA
Ribosomal_L9_N
Motif
Other DBs
NCBI-GeneID:
108891997
NCBI-ProteinID:
XP_018544916
UniProt:
A0AAJ7Q2E4
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Position
LG23:15646738..15652220
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AA seq
504 aa
AA seq
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MSIQNLPIDIQTSKLLDWLLDRRHCNLKWQSAVKTIREKINAAIQDMPESEEIKQLLSGS
YIHYFHCLRIVEILKGTEASSKNIFGRYSSQRMKDWQEIVSLYEADNVYLAEVASLLSRN
VSYEGPALRKQLAKAQQLQQELSRREVECQSSAADLRERYYAACKQYGITGENVPRELQA
LVKDLPAVLEEIVKDAAKLEEQIQLYTAFTNFVCEWSEPVLPILTFAQRKGNTTFYEWRT
GKVPTVVERPVVEDASQDTVTEDTIDWGDFGKGTTTLGVNSDVTVEDDIDWGISLEPNSE
DVAAGSIDWGDSEAAPIEIEIVDVGTDCPEGVARGEDALTLLENSQSRNQFIDELMELEV
FLTQRVSEMGEEGDVVSMSQFQLAPAVIQGQTREHVREMLSEVQDLLGRLTSLRMQHLFM
IQASPRYVERVSEVLRQKMKQADILVLKGATMAEKRQEALEEQSRLEPRVDLLAGCTREL
QKLIEADISKRYHNRPVNLMGVNI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcaaaaccttcccatcgacatacagaccagcaagcttctggactggctgctg
gatcgacgtcactgtaatctgaaatggcagagtgcagtgaaaacaatcagagagaagatc
aatgctgccatccaggacatgccagagagcgaagagatcaagcagcttctctcaggctcc
tacattcattactttcactgcttgaggatagtggagatactgaaaggaacagaggcttcc
tctaagaacatctttggcagatattcatctcagaggatgaaggactggcaggagattgtt
tccctttatgaggcagataatgtctatttggcggaggtggccagcctgcttagtcgcaat
gtgagctatgaaggcccggctctgaggaaacagctggccaaagcccagcagctgcagcag
gagctgagcaggcgggaagtggagtgccagagctcagccgcagacctgagggaacggtac
tatgctgcctgcaaacagtatggcatcacaggagaaaatgtgcctcgtgagcttcaggcc
ttggtgaaagacttaccagcggttcttgaggaaatcgtgaaagatgcagcaaaattagag
gagcaaatccaactttacacagctttcacaaactttgtatgtgagtggtctgagccagtc
ttgcccatactgacatttgcccagaggaaaggaaacacaacattttatgagtggagaaca
gggaaagtccccacagtagttgaaaggccagttgtggaggatgcatctcaggatacagtc
acagaggatacgatcgactggggtgactttggcaaaggaacgaccacactgggtgttaat
tctgacgtcacagttgaggatgatatagactggggtatcagtctggagccaaactctgaa
gatgttgctgcaggcagtatcgactggggtgacagtgaagcagctcccatagaaattgaa
attgtagatgtgggcacagactgtcctgagggtgtggcgaggggtgaggacgctttaact
ctattggagaactctcagtcacgcaatcagttcatcgatgagctaatggagctggaagtg
ttcctgacccagcgcgtgagtgagatgggagaagagggggatgtggtttctatgagccag
ttccagctggcccctgctgtcatccaaggccagacccgtgagcatgtccgggagatgctg
tctgaggtgcaggaccttcttggccggctcacctctctccggatgcagcacctgtttatg
atccaggcctcgccacggtatgttgaacgtgtgtcagaggtgctgaggcagaagatgaag
caggccgacattctggtgctgaaaggtgccacaatggcagagaaaaggcaggaagccctg
gaggagcagtctagactggagcctcgtgtcgacctgctggcagggtgcacccgggaactc
cagaaactgattgaagctgacatttcaaagcgataccacaacaggcctgtcaacctgatg
ggggttaatatatag
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