Lates calcarifer (barramundi perch): 108892006
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Entry
108892006 CDS
T04895
Name
(RefSeq) syntaxin-4
KO
K13502
syntaxin 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108892006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108892006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108892006
Membrane trafficking [BR:
lcf04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108892006
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108892006
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
PilO
DUF6584
Med9
Lzipper-MIP1
ZnuA
PTX3_N
Lectin_N
TACC_C
Arc_PepC_II
PCRF
TPR
Motif
Other DBs
NCBI-GeneID:
108892006
NCBI-ProteinID:
XP_018544929
UniProt:
A0AAJ7VBG8
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Position
LG23:complement(15843492..15849002)
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AA seq
297 aa
AA seq
DB search
MRDRTKELGNNAEALDDDEEIKVPMIKPGTSSVKEEKESEAFFRKAQEIHEGLQSLKRMV
SDLENKQKTVLGVALPEESMKKELQTLREEIKTLASQIQRKLKSIEPKKGEDDGKYIPIN
IRMQRTQHGVLSKEFVELMGHCNTIQSQYRDRNVERIQRQLKITGTNVSDEELDSMLESG
QTDVFTQNILIDAKATKQALNEIESRHDEILKLERSIRDLHDMFQYLAMEVEAQGEMVNQ
IETNIKQSANYVEKAKENTEKAVTYQHQARKKKIWIAICLAILILILVVSLLVSFGT
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccggactaaggaattaggaaataacgctgaggccttagatgacgatgaggag
atcaaagttccgatgatcaaacctggaacctcttcagtcaaagaggagaaggagagcgaa
gctttcttcagaaaggcgcaagaaattcatgaggggctgcagagcctcaagcggatggtg
tccgacctcgagaacaaacagaaaacagtgctaggtgtggcactgccagaggagagtatg
aagaaagagctgcagactcttcgagaggagattaaaaccctggcgagccagatccagaga
aaactgaagagtattgaacctaagaagggagaggatgatggaaaatatatacccataaat
attcggatgcagcgcacacagcacggcgtcctgtccaaggagtttgtggagctgatgggt
cactgtaacaccatccagtcccagtacagagaccgcaatgtggagaggatacagaggcag
ctcaaaatcactgggaccaacgtgtcagacgaggagctggattcaatgctcgaaagtggg
cagacggatgttttcactcagaatatcctgatcgatgctaaagcgacgaagcaggccctg
aatgagattgagtcccgacatgatgagatcctgaagctggagaggagcatcagagacctg
cacgacatgttccagtacctcgccatggaggtggaggctcagggggagatggtgaaccag
attgagaccaacatcaaacagtctgctaactatgtggagaaagcaaaggaaaacacagag
aaagctgtcacatatcagcatcaagcacgcaagaaaaagatctggatcgcgatctgtttg
gccatcctcattctcatcctagtcgtgtcgttgctcgtcagtttcggcacctaa
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