KEGG   Lates calcarifer (barramundi perch): 108892015
Entry
108892015         CDS       T04895                                 
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04510  Focal adhesion
lcf04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108892015
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108892015
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lcf00535]
    108892015
Proteoglycans [BR:lcf00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    108892015
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_14 LRR_9 LRR_LRWD1 LRRCT
Other DBs
NCBI-GeneID: 108892015
NCBI-ProteinID: XP_018544948
UniProt: A0A4W6E2Z7
LinkDB
Position
LG23:15976958..15986294
AA seq 363 aa
MRCVSWLLLGTCLLVLGPAVQGAPSQCPSLCHCHGDLQHVICDSVGLRKIPRVSEATRLL
NLQRNNLGSIPTGAFSESKGLISLHMQHCQLREIGSQAFKGLKKLIYLYLSNNEINSIKP
GAFEDLTELTYLYLDGNQISDLAKGIFSPMINLFILQLNDNKLRDLRPGTFTGAKDLRWL
HMSGNELTTLQPGSLDDVENLAILHLDRNKMSTYPSVAMSKLRVVEELTLGRNPMRTIPD
NAFQSFGRYMEKLHLDNMGLEKFSDGAFTGVTAIKSLHLDNNKLKSLPKSLEFGTITNLT
LSSNPWNCTCQLAPLRRWMDSSRNRPDAMCASPSSQKGKQVRDSTAFSGCRAKAKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcgttgtgtaagttggttgttgttggggacctgcctcctggtcctgggcccagcggtg
cagggagccccgagccagtgccccagcctctgccactgccacggtgaccttcagcacgtc
atctgcgacagcgtcgggctgaggaagatccctcgggtgtcagaggccacccgtttgctg
aacctgcagaggaacaacttgggcagcattcccacaggggccttcagcgaaagcaaggga
ctcatctctctgcacatgcagcactgtcagctccgagagatcggatcccaggccttcaaa
gggctgaagaagctcatctacctctacctgtccaacaacgagatcaacagcatcaaaccc
ggtgccttcgaggacctcactgagctcacctacctctacctagatgggaaccagatcagc
gacctggccaagggcatcttctcccccatgatcaacctcttcattctgcagctcaacgac
aacaagctgcgagacctgcggccggggacctttaccggtgccaaagacttgcgctggctg
cacatgagcgggaacgagctgaccaccctgcagccgggctctctggacgatgtggagaac
ctcgccatacttcatctggacaggaacaagatgtctacctatcccagcgtggccatgagt
aaactgcgcgtggtggaggaactcacgctggggaggaaccccatgaggaccatcccagac
aacgccttccagagctttggacgttacatggagaaactacacctggacaacatgggtctg
gagaagttctctgatggtgcgtttactggtgtgacagccatcaagtccctccacctggac
aacaacaagctaaagtcccttccaaaaagcctagagtttggcaccatcaccaacctcacc
ctctctagcaatccttggaactgtacatgtcagctagctcctctgcgcaggtggatggac
tctagccgcaaccgtccagacgcaatgtgcgcttctccatcgtcacagaaaggcaagcaa
gtcagagacagcactgccttcagtggctgcagagccaaggcaaagagggccaagaaggga
acacgtcattga

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