Lates calcarifer (barramundi perch): 108892019
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Entry
108892019 CDS
T04895
Name
(RefSeq) tubulin polyglutamylase ttll6
KO
K16582
tubulin polyglutamylase TTLL6/13 [EC:
6.3.2.61
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108892019
04812 Cytoskeleton proteins [BR:
lcf04812
]
108892019
Enzymes [BR:
lcf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
108892019
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
108892019
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
108892019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_ST
ATPgrasp_YheCD
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
108892019
NCBI-ProteinID:
XP_018544956
UniProt:
A0AAJ7Q2G0
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All DBs
Position
LG23:complement(15743537..15751658)
Genome browser
AA seq
690 aa
AA seq
DB search
MKRYQKINHFPGMSEICRKDLLARNMNRMLKLFPKDYNIFPRTWCLPADYSDFQAYTRAK
KNKTYICKPDTGCQGKGIFITKSSKDIPPGEHMICQVYISRPLIIDGYKFDLRIYVLVTS
CDPFSIFMFNEGLARFCTTQYNEPTHGNVDDVCMHLTNYSINKHSENFVRDEDTGSKRKL
STLNKHLESISCNTEKLWNDIEDVIIKTLISAHPILKHNYHTCFPNHTTGSACFEILGFD
VLLDHRLRPWVLEVNHSPSFTTDSPLDREVKDALLYDTLVLINLGACDRRKITKEERRRV
KDRLQQNRSREARSEELRQCQAATVEQMERYEAKHLGGFKRIYPREGGEKYDKYFKHSSS
LFQETAASKAREECARQQLQELRLKQEQRDQKGVRKRDLQGETAGERVKPRRASTQPPTS
NSDPLLPPLSSVSVDPEAADVQQEEKQQEEVEVEEEEEGVAAADMEEQERVDALLQRKKL
LQDLGVVDQIHQLLQGRIEGGGVLQDAKDTYTHQQSKQTQQRQQQIKLDSLMQFSHRMKQ
QQQQQQPCTQTSQQHVHSHMTQQRLLRPTLDQRSLNESGCLQYEPESHNRMGEIRRTISA
QRIHWPASSSLTVRQDSRSSSYTDARSRPSIPIINHVPKGGLRCAYMSHDPAALQSLLVI
STRAPLVRRPGFSHIVRNSSRRAPQHSKGQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttaccagaaaatcaaccatttcccagggatgagtgagatctgccgcaaagat
ttactggcaagaaacatgaaccgaatgctaaagcttttccccaaagactacaatatcttc
cctagaacgtggtgccttcctgcagattacagtgacttccaagcttacaccagggccaaa
aaaaacaagacatatatctgtaagccagacactggttgccaaggcaaaggcatcttcatc
accaaatccagtaaagacattccacctggagagcacatgatctgccaggtttacatctcc
aggcctttaataattgacgggtacaagtttgacctgcgaatttacgtgctggtgacgtca
tgtgacccgttcagcatattcatgttcaacgagggactggctcgcttctgcaccacacag
tacaacgaaccaacgcacggcaacgtggatgacgtgtgcatgcatctcaccaactactcc
atcaacaagcacagtgagaactttgtccgtgacgaagacactggcagcaaacgaaagctg
tccaccctgaacaagcacctggagtccatcagctgcaacacagagaagctgtggaacgac
atcgaggatgtgatcatcaagactctgatctctgctcaccccatcctcaagcacaattac
cacacctgcttccccaaccacaccactggcagcgcctgctttgagatcctgggcttcgac
gtgctgctggatcaccgcctcagaccctgggtcctggaggtgaaccattccccgagtttt
accactgactcaccgctggatcgcgaggtaaaggatgccttgctgtacgacaccctggtt
ctcatcaacttgggcgcctgcgaccgccgcaagatcacgaaagaggagagacgcagggtg
aaggacaggctgcagcaaaaccgctccagagaggccaggtcggaggagctgcgtcaatgc
caggcagccacggtggaacagatggagaggtacgaggccaaacacctgggaggctttaag
aggatctatcccagagagggaggggagaaatacgacaagtacttcaaacacagcagctcg
ctcttccaggagactgcagcgtccaaggccagagaggagtgtgccaggcaacaactgcag
gagctgcgtctgaagcaggagcagagagaccagaaaggtgttcggaagagagacttgcag
ggggagacagcgggggagagagtcaaaccacgacgagcatcgacacaaccccccacctcc
aactctgacccactgctgccccctttgtccagcgtgtcggtggatcctgaagctgcagac
gtccaacaagaagagaagcagcaggaggaggtggaggtggaggaggaggaggagggggtg
gcagcagcagacatggaggagcaggagcgggttgacgcgctgctccagaggaagaagctg
ctgcaggacttgggggtggtggatcagatccaccagctgctgcagggccggatagaggga
gggggagtcctgcaggacgccaaggacacctacacccaccagcaaagtaaacagactcag
cagagacaacagcagataaagttggactctctgatgcagttttcccacaggatgaagcag
cagcagcagcagcagcagccctgcactcagacctcacagcagcacgtccactcccacatg
actcagcagcgtttgctcaggcccacgctggaccagaggagcctgaacgagtccggctgc
ctgcagtacgagcccgagagccacaacagaatgggagaaatacgaaggaccatcagcgct
cagcggattcactggccagccagcagctccctcactgtgaggcaggacagcaggagcagc
tcctacaccgacgcccggtcccgtcccagcatccccatcataaaccatgtccctaaagga
ggcctgcgctgcgcctacatgtcccatgaccccgccgccctgcagagcctgctcgtcatc
tccactcgagccccgctggtcaggaggcctggcttctctcacatcgtcagaaactcctcc
cgcagggccccccagcacagtaaagggcagtga
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