Lates calcarifer (barramundi perch): 108892022
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Entry
108892022 CDS
T04895
Symbol
hoxb1b
Name
(RefSeq) homeobox protein Hox-B1b
KO
K09301
homeobox protein HoxA/B/D1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108892022 (hoxb1b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108892022 (hoxb1b)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
DUF7255
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108892022
NCBI-ProteinID:
XP_018544962
UniProt:
A0A4W6E1S6
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Position
LG23:complement(15718251..15722074)
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AA seq
289 aa
AA seq
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MNSYLEYPVCNRGANIFSAKAGYHNLNHGYMPSNSCATSDSYAPDGRLVGPTSAPHQTPS
LPLHHQTHVNLDLQFSTPGNSMYGSPLEYGHHQYGLASEQDRNFIHAQVSPLGTNMPPYP
GESCGPGVATGGQYLHFGNGDQRQQEYPESVYTRLPPQSKEKDLENVEDASKTFDWMKVK
RNPPKTAVLSEFGVPGQHNVIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNET
QVKIWFQNRRMKQKKREKLGCVLVNTPAPVEKLSGPDTSPKEKGKDSEP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaactcctacttagaatatccagtgtgtaaccggggagcaaatattttcagtgccaag
gccgggtaccacaatttaaaccatggatacatgccgtccaactcgtgcgcaacaagtgat
agttacgcaccggacggccgcttagttggtccaacttctgcgccccaccagactccgagc
ctccccctgcaccaccagacacacgtcaacctggacctgcagttttcaacaccggggaac
tccatgtacgggtcacctctggagtacggacaccaccagtacggcctagcttccgagcag
gaccggaacttcattcatgcgcaagtttcacccctcggaacaaacatgcccccttacccc
ggggaaagctgtgggcctggggttgcaacggggggccagtatctacattttggaaacgga
gaccagaggcagcaagaatatccggagagtgtttacacaaggttaccgcctcagagtaaa
gagaaggatttggagaatgtggaagacgcttctaaaacgttcgactggatgaaagtgaag
aggaatcctcccaaaacagcggtcctatccgagttcggggttcccggccagcacaacgtg
atccgcaccaacttcactaccaagcagctgaccgagctggagaaagagttccactttaac
aaatacctgacgcgggcacggcgggtggaggtcgccgcgagtctggagctcaacgagacg
caggtgaaaatctggtttcagaaccgcaggatgaagcagaagaaacgcgagaagctcggc
tgcgttttggtcaacactcccgcacctgtggagaaactctccggccctgacacctctccg
aaggaaaaggggaaagactctgaaccataa
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