Lates calcarifer (barramundi perch): 108892023
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Entry
108892023 CDS
T04895
Symbol
hoxb5b
Name
(RefSeq) homeobox protein Hox-B5b
KO
K09305
homeobox protein HoxA/B/C5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108892023 (hoxb5b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108892023 (hoxb5b)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Hydin_ADK
DUF2209
DUF739
Motif
Other DBs
NCBI-GeneID:
108892023
NCBI-ProteinID:
XP_018544963
UniProt:
A0A4W6E173
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Position
LG23:complement(15733668..15736040)
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AA seq
284 aa
AA seq
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MSSYFVNSFSGRYPNGSDYQLLNYGTNGAVSGSFRDPGTMHSGSFGYNYNGMDLTVNRTN
NGSHFGAVREDARGFGPDARYRQTPNCSLSSPDPVPPTCATASREPLELKSPSPPSDRST
TSVGGSNLNKSNSAHFTEIEDATVASETEEGAHSSGGSGTANRAQQQQQQHQEPNATSST
PTSNDCQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRI
EIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLVTGGSAFHN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttactttgtaaactcgttctcagggcgctatccaaatggctccgactatcag
ttactaaattatgggactaacggcgctgtgagcggttccttcagagaccctggcaccatg
cactccgggtctttcggctacaactacaatggcatggacctaaccgtgaaccgcaccaac
aacggcagccacttcggtgccgtgagagaggatgcccggggattcgggccggacgcccgg
tacagacagacgcccaactgctcgctctcgtctccagatccggtgccgccgacgtgcgcc
acggccagccgggagccgctggaactaaaaagcccctctcccccgtctgaccggagcacg
acctcggtcggcggcagcaacctcaacaaaagcaacagcgctcatttcacggagatagag
gacgccaccgtcgcctccgagaccgaggagggcgcacacagcagcggcggctccggcacg
gcaaaccgggcgcagcagcagcagcagcagcaccaggaacccaacgccacctcctccact
cccacatcaaacgattgccaaacaccacaaatattcccctggatgcggaaactgcacata
agccatgatatgactggacctgatgggaaaagggcccgaactgcgtacacccgctaccag
acgctagagctggagaaagagtttcacttcaataggtacctaaccagacggcggaggata
gagatagcccacgccctgtgtctttccgaaagacagatcaaaatctggtttcagaaccgc
aggatgaagtggaagaaggacaataaactgaaaagcatgagtcttgtaacgggagggagc
gccttccacaactga
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