Lates calcarifer (barramundi perch): 108892038
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Entry
108892038 CDS
T04895
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108892038
04137 Mitophagy - animal
108892038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108892038
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108892038
Membrane trafficking [BR:
lcf04131
]
Autophagy
Xenophagy
Cargo receptors
108892038
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108892038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
Fez1
TSC22
DUF7491
GAS
CCDC39
DUF5757
FPP
Glyoxalase_4
Trm112p
Motif
Other DBs
NCBI-GeneID:
108892038
NCBI-ProteinID:
XP_018544986
UniProt:
A0A4W6E1V7
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All DBs
Position
LG23:15757211..15766027
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AA seq
600 aa
AA seq
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MESPSGTAAETSARTYSQVVFIDIPHSYPPATPVTCCYTLTAGYQPHPRDWVGIFKVGWS
TAKDYHTFVWVEPCLDVVGQGSVTRQAVFKEYYLPKDEIEFYQFCYVDNSGQVRGASTPF
CFKNPEEQNMESSPEDDLLVITTQEQVEQSMHEKAELQKELDQMRQENENLKSTLQKEQQ
EAAILKGQNEEKEKEKSELVRELDQIKEQNGNLKSHLQQQQQEMENAKEELVQMKKKVEI
QQQSAAEQNKMNQSLSFDGASSPNETHSQEKYNRAVVKINQLKDERKELKERIDVQSDEI
VKLHSKFREVERELFKARDSIQLLQVDLQSSEKEKERLSAELQRLQSIAHNVDEVKRENQ
ELRRSLSQQEAPEAFPADDCQTLSSQLQDVQVMLVTEKEESKNAKRRAEYLDRQLMEVRE
QLESVSSAYDQEQRKSGKLELQLREALETISDKESIIDENEHLMRLVNHEKEELIRENHN
LKSDIDGLRRVHDLNIAPLTEPPHMQPDATSQAGNASIGHEQQHQDTSGQADDLYEPIGN
IEEPEEEVLVCRHCQESFPGITRNELEQHEQSHRVCPFCTMICDNMEQSVFEDHVYSHEL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccttcagggacagcagctgaaacctcagcacgcacctactcccaggttgtc
ttcatcgacatccctcactcttacccacctgcgacccccgtcacctgctgctacaccctc
actgcagggtaccagccccatcctagggactgggtgggcatttttaaggtggggtggagc
acagcaaaggattatcataccttcgtatgggtggagccatgtctggatgtggtaggacag
gggtcagtgactagacaagctgtttttaaggagtactacctgccgaaggatgagatcgag
ttctaccagttctgctacgttgacaacagtggtcaggtgcgaggagccagcactcccttc
tgtttcaaaaacccagaggagcaaaacatggagagcagcccggaggacgacctcctggtt
attacaacacaggagcaggtcgagcagagcatgcatgagaaagctgaactgcagaaggag
ctggatcagatgaggcaggaaaatgaaaacttgaaaagtactttacagaaggaacaacaa
gaggctgccatcttaaaggggcagaatgaagagaaagagaaagagaagagtgagctggtc
agagaactggatcagatcaaggagcagaatggaaacttaaaaagccacttacagcagcag
cagcaagaaatggaaaacgcaaaggaggagttggtccaaatgaaaaagaaggtggagata
cagcaacagagcgctgcggagcagaacaaaatgaatcagagtttgagttttgacggagca
tcaagtccaaatgagacacattctcaggagaaatacaatcgagcagtggtgaagatcaac
cagctgaaagacgagcgcaaggagctgaaggagaggatcgatgttcaaagcgacgagatt
gtaaagttacatagcaaattcagagaagtagaacgggaactgttcaaagcaagagacagc
atccagcttctacaggttgatcttcagagcagtgagaaagagaaagagaggctctctgca
gagctacaacggctgcaaagcatcgcacacaacgtggacgaagtgaagagggagaaccag
gagttacgcaggtcgctgtcgcaacaagaggcaccggaggcctttccagctgatgattgt
cagactctctccagccagctacaggatgttcaggtgatgttggtgacggagaaggaggag
tccaaaaacgccaagagacgagctgagtatctggacagacagttgatggaggtcagggag
cagctggagagtgtgagctcagcatatgaccaggagcaacggaaaagcggcaaattggag
ctacaactcagagaggcattggaaacgatctcagataaagaaagcatcatagacgagaat
gaacacctgatgaggcttgtaaatcatgagaaagaggagctcatcagagaaaaccacaat
ctaaaaagtgatatcgacggcctgcgcagagttcacgacctcaatatcgctcccctcacc
gaaccgccacacatgcagcctgacgccacctcacaagccggaaacgcttcaatcggccat
gagcagcaacatcaggacacatctggccaggctgatgacctgtatgaacccattgggaac
attgaagaaccagaggaagaggtgctggtgtgtcgtcactgccaggagagcttccccggc
ataacccgaaacgaactggagcagcacgagcagagtcacagagtgtgtcctttctgcacc
atgatctgtgacaacatggagcagtctgtgttcgaagatcacgtctacagtcacgagctg
tga
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