Lates calcarifer (barramundi perch): 108892041
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Entry
108892041 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108892041
KO
K12494
PH and SEC7 domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108892041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108892041
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108892041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
108892041
NCBI-ProteinID:
XP_018544990
UniProt:
A0A4W6E668
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All DBs
Position
LG23:complement(16080428..16153747)
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AA seq
1644 aa
AA seq
DB search
MSQSGKVLHLYVEVRSAPDQNGGKGAFGEKEEGIASVQDSPAELLSQLATKTTCQVVAKP
STAHHRVQDCTHSQSPSRNTVSFQLQQASSSPTVNKRWSLPCDGVSAVRSSPGPSSGKAT
VPHTPPNCRRLNEEEVSGGKRSVVTFSYIEKSNVKTLDSPRNSVRGTREERSTPSHFQKR
LSDPVWFGSPSSSCSSSPKLTFRSPGSHQQTFSPSLRQPPLDPIGRAATQRAVEEFGSPL
LRIKLAHALEHTSFSHYNQQPRCQSWAGSPVQRRNISVIPKDHITDRSQAICGLPRSPAS
DQLSSQSKQSPQLRPGSSVETQSPLNWSGEDRTAVGSPATKRNINRACNRSASPKGAVLQ
LGNNVVEGLNQLSDSKSSSPAHSPEVARRLAEEATKVSSILTEARRSSLHNALGELVSSS
NSGEFHSSSPNAQQSKQMLKMNIPLNNQHTPATDNTDSHQPENSLLQSHSCETNSHTDYD
THQEDCIQRSQHQSSILSAAQCSPALPSRVLRPSHPPTELSSPVRDPRLFQAELRAPDTP
TLHRCQPPQYTGDSWSPSLDRRGDLSCFEKGDCTELARRLYINQSVEEAPVSWTSRQQWG
NQAENSPRPSPEPGFGFNNDQPNRQSNQRRRPLSPTAQQKRAEQRRREILLLGPVVLDSP
EEDEGCDEEGEGNDMEGYGAGQQPRLRRIEEPPEAEQNGAMGGPSSRSSSGVTGSLGDRD
CVSPESSQSSHQSNETGAATSGIQTDSGCAVPVPSLHCQRIARAKWEFLFGTPAEEAASR
GEKNSLETSTAPPSGNSSESPTPTPPSSLPLLSANHEVQHVEVELVTPPPAIIGTSPKTG
IIRRTLKYSETDLDAIPLRCYRETDIDEVLLAEQDDADSAFGSNRSVQGTSGTGSSPLGG
LAYGRTDREEVDVRRGGRKEEEEEDEEEEEEEEEEEMVSWASVRMQGDNRKQQYAAQEEP
AVFGHLMKRPMETFFDNHHPALKSPILVSGPRCAAEDTFSRHFESIMESHRAKGTSYNSL
DSEELLTSSTQTVLTFDLPTLTPAIHGLVCQSARQIVQLSFAPLAHDERPSLSDSIFTVT
GDSDATRAPSSERLSSGSDDTPPRGQDVCTQLGSSWYSNPSFSLPSREKARLATDSELDQ
DLSDRLGLGSSDTLTNGSHRADVAAAKRLAKRLFNLDGFRKSDVARHLSKNNDFSRMVAE
EYLSFFNFTGFAIDQALRTFLRQFALMGETQERERVLSHFSRRYLDCNPKVMPSEDAVHT
LTCALMLLNTDLHGQNIGKRMSCTQFIGNLEGLNDGQDFPKDLLKALYNSIKNQKLQWTL
DEEELRKSFSELGDSLCESNTSRSMKRVGSSGKPLAEETQPSGTLLYKNGFLVRKVHADS
DGKRTPRGKRGWKTFYAILKGLILYLQKGEYRPDKQLSDEDLKNAVSIHHSLAMKASDYS
KRPNVFYLRTADWRVYLFQAPNAEQMQSWITRINTVAAMFSAPPFPAAIGSQKKFSRPLL
PGTMSKLSEEEQVRSHEARFRAISTELAELRSYPPDRKVKGRELEEYRQRDEYLEFEKTR
YGTYVMLLRAKIRSGEEDLSVFESQLLEDNGLQRAHSSPTLQDSSQASQASSTRDGGNSS
KASGCSSKVRQEGQRHSYRQAVKK
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtctggaaaagtccttcatctgtatgtggaagtgaggtctgccccagatcag
aatggaggaaaaggggcatttggagaaaaggaagaagggattgcttcggttcaggacagt
cctgcagagctcctgtctcagctagcaaccaagacgacctgccaggtggtcgccaagccc
tccacagctcatcatcgagttcaggactgcacacacagccagtctccatctcgaaacaca
gttagctttcagctccagcaagccagcagctcaccgacagtcaacaaacgctggagttta
ccctgtgatggagtttctgctgtccgctcttcaccagggccctcctctggaaaggccacc
gtccctcacacacctcccaactgtcggaggttaaatgaggaggaagtcagcggcgggaag
cggtctgtcgtcaccttcagttacatcgagaagtccaatgtgaagacgctggacagtcca
cgcaactctgtgagagggaccagagaggaaagatccaccccctcccactttcaaaaacgg
ctcagcgacccagtttggtttgggagtcccagttcatcgtgcagctccagtcccaagctg
actttccggtcaccgggaagtcaccagcaaactttctctcccagtcttcgccaaccaccc
ttggaccccatcggcagggcagctacccagagggctgtagaggagtttggctccccatta
ctgaggattaaactggcccatgcacttgagcacacctcattctcacactacaaccaacag
ccgcgctgtcagtcctgggctgggtcccctgttcagcgtcggaacataagtgtaatcccc
aaagaccacatcacagacaggagccaggctatttgtgggctgcctcggagcccagcatca
gaccagctatcctcccagtccaagcagtctcctcagttgaggcctgggtcctctgtggag
acccagagccctcttaactggtcaggagaggacagaactgcagtgggaagcccagccacc
aaaagaaacattaacagggcctgtaacaggagcgcttcaccaaagggagcagtcttacaa
ctcggcaataatgtagtcgagggcttgaaccagttaagcgacagtaaatcctcctctcca
gctcacagccctgaagttgcccgtaggctagcagaggaggctaccaaagtatcttctatt
ttaacagaggcaaggaggtcctcattgcacaatgctttaggcgagcttgtaagcagctca
aactctggagaatttcacagttcctctccaaatgcacaacagtctaagcaaatgcttaag
atgaacatccctttaaacaaccaacacacgccagcaactgacaacacagactctcaccag
cctgaaaactctctcttgcagtcacattcatgtgaaacaaactcccatactgattatgac
actcaccaggaggactgcattcagagatcccagcatcagagctcaattttatctgcagct
cagtgttcgcccgccctcccttcacgtgtcctccgtccctctcatcctcccactgagctc
agctctcccgtgagagaccccaggcttttccaggctgagctccgagcaccagataccccc
acactgcatcgctgtcagcccccacagtacaccggagattcctggtccccgagcctggac
aggagaggagacttaagctgttttgagaaaggggattgcactgagcttgctcgtaggctc
tatatcaatcaaagtgtcgaggaggcaccggttagctggacttccaggcagcagtgggga
aatcaagcagagaacagcccaaggccaagccctgagcctggatttgggttcaacaatgac
caacctaatcgtcaatccaaccagcgtcgcaggccgctcagccccacagcccaacagaaa
cgggctgagcagaggaggagagagatcctgctcctgggaccagtggtgctggactccccg
gaggaagatgagggttgtgatgaagagggagagggcaatgacatggaaggatatggtgca
gggcagcagcctcgcctgcggaggattgaagagcctcctgaggcagagcagaatggagca
atgggagggccgtcctcgcggagctccagtggggtgacaggcagcctgggagacagagat
tgtgtgtccccggagtccagccagtccagtcaccagagcaatgagacgggggctgccacc
tcaggaatacagacggatagtggctgtgcagtgcctgtgccctcgctccactgtcaaaga
attgcacgtgccaagtgggagtttttgttcgggacccctgctgaggaggctgctagcagg
ggggagaaaaattctctggaaacctccacagctcctccaagtggtaattccagtgagtca
cccaccccgactcccccttcctccctacctctgctctctgccaatcatgaggtgcagcat
gtagaggtagagctggtgacccctcccccggccattatcgggacatcacccaagaccggc
atcattcgccggacgttgaagtattctgaaaccgacctggacgccatcccgcttcgctgc
taccgcgagacggacatagatgaggtgctgctggctgagcaggatgacgccgactcagct
tttgggagtaaccgcagtgtgcagggcacctcagggacaggcagcagccctctggggggt
ctggcttatgggaggacagacagggaggaggttgacgtgagaagaggggggaggaaggag
gaggaagaggaagatgaggaggaggaggaggaggaggaagaggaagaaatggtgagctgg
gccagtgtgagaatgcaaggagacaacaggaagcagcagtatgcagctcaggaggagcca
gcggtgtttggacaccttatgaagagaccaatggaaacgtttttcgacaaccaccaccct
gccctgaaatcccccatcttggtctccggtccccgctgtgctgcagaggacaccttcagc
cgccactttgagagcatcatggagtctcatcgagccaaagggacttcgtacaacagcctg
gacagtgaggagctgctgacctcaagcacccaaacggtcctgacctttgacttgcccaca
ctaacccctgccatccatgggctggtctgccagagcgccaggcagatcgttcaactcagc
tttgccccactggcccacgatgagaggcccagtctctctgattctatctttactgtgact
ggggactcggacgccaccagagccccttccagtgaaaggctgagcagcggttcagacgac
acgccacccagaggacaagatgtatgtacacagctggggagcagctggtacagcaaccca
tctttctctttacctagcagggagaaggcccgtctggcgacagactcggagctggaccag
gacctcagcgacaggcttggcctgggcagcagcgacaccctcaccaatggcagccaccgt
gccgatgtggcggccgccaaacgtcttgccaaacgtctcttcaacttggatggcttccgg
aagtctgacgtggcacggcacctcagcaagaataatgacttcagccgaatggtagcagag
gagtatctgagcttcttcaacttcacaggctttgccattgaccaagcattgcggactttc
ctcaggcagtttgccctgatgggagagactcaggagagggagagggtgctgtcacacttt
tcaaggcgttacttggactgcaacccaaaagtcatgccatcagaggatgcagttcacacc
ctcacctgtgccctaatgctgctgaacactgatctacatggtcagaacatcggtaagagg
atgtcatgcacacagttcattggcaacctggaagggctgaatgacggccaagattttccc
aaggatctgcttaaagctctctacaactcaatcaagaatcagaagctgcagtggacactt
gacgaggaagagctgcggaagtcgttttcggagctcggggacagcctgtgcgagtccaac
acctccagatccatgaagagggtgggcagcagcgggaagcccctggcggaggagacacag
ccctcgggaacgctgctgtacaagaacgggttcctggttcgcaaagtccacgccgactca
gacggcaagagaacaccaagagggaaaagaggatggaagaccttctatgccatcctgaaa
gggctcattctctatctgcaaaaaggggaatacaggcctgacaagcagctatctgatgag
gacttgaagaacgctgtgtccatccaccactctctggccatgaaagcatcagactacagc
aagaggcctaatgtgttttacctgcggacggccgactggagggtgtatctcttccaggca
ccgaacgcagagcagatgcagtcttggatcacacggatcaacacggtggctgccatgttc
tcagctcctcctttcccagcagccatcggctctcagaagaagttcagccggccgctgctg
ccggggacaatgtcaaaactgtctgaggaggagcaggtcagatcccacgaagctcgattc
agagccatctccactgagctggctgagctgcgctcttatcctcctgaccgcaaggtcaaa
gggcgcgagctggaagagtaccgccaacgagacgagtatctggagtttgagaaaactcgg
tacgggacttacgtcatgctgctgcgagctaaaatccggagcggcgaggaggacctgtcg
gtgtttgagtcccagctgctggaagacaatgggctgcagagggctcactccagccccacg
ctgcaggacagcagccaggccagccaagccagcagcaccagggacgggggcaacagcagc
aaggccagcggctgcagcagcaaagtccgacaggaaggccagagacacagctaccgtcag
gccgtcaagaagtga
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