Lates calcarifer (barramundi perch): 108892048
Help
Entry
108892048 CDS
T04895
Name
(RefSeq) TANK-binding kinase 1-binding protein 1
KO
K12652
TANK-binding kinase 1-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108892048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBD
Zn-C2H2_12
Fib_alpha
Cnn_1N
PKcGMP_CC
DUF7376
BRE1
Motif
Other DBs
NCBI-GeneID:
108892048
NCBI-ProteinID:
XP_018544999
UniProt:
A0AAJ7Q2I9
LinkDB
All DBs
Position
LG23:15503004..15558467
Genome browser
AA seq
639 aa
AA seq
DB search
MQSLFGGGELGLLGGGGDAGGLKEDGCGSVVWRSSPLPPDDVYSASHFALITAYQDIKTR
LACLERENTSIKRKLKIYEIKFPMISEFGEDTNSYCSFESKETALLHSENGNLQQRVNVL
THELQKRKEREEQLEDVIQAYEKIHMEKSNLQRDLDKMTSLVEKHVERILNLESALRQRD
NSLQKLNMQLHSKDMQYLQLHAGPDSHMLDCPALTLQSSRSLDALSDLKLQRLEAELEGA
RHEAQGACQREEELKAECERLKEEMRQLQNSQREREMTSPCKQCDVEWIKKVGDEQVNLA
LAYTELTEELGRLQALSSKQTEILRKASQEQASPVQRHSPIHHQRHSPVSQRHSPISQRH
SPVPPPPQHSPIQQRRSPVLQRLSPDMHRRSPLLDVNDGPASYSCRPPSQHLRASFQGRR
SYSEVADPSAYQCPPRFSLDPVSTLPKPRPYVEGYPKQQPQHVGSPHGGLQHRSSPSPHQ
SGGGGDGGLGESSMRHSREMPFPLSEVAHLHFEPPPPSTPAPQPPQSSEDEEEWTCPHPI
SPPRTLGVLSAAVPSGVMRGPASCSAFPIPQRPNTLSCHPQPGYMSAEHAQSWPSINLWM
ETEESDMRSCPLCQLIFPVGYPDDALIKHIDSHLENSKI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctctgtttggcggaggggagctggggctgctgggaggaggcggcgacgcaggg
ggcctgaaggaggatggctgtggcagcgtggtgtggcggtcctcgcccctgccccccgac
gacgtctactcagcctcccactttgcccttatcacggcctatcaggacatcaagacgagg
ctggcctgcctggagcgagagaacaccagtatcaagaggaagctgaagatctatgagatc
aagttccccatgatcagcgagtttggggaggacactaactcctactgctcctttgagagc
aaggagacggcgctgctgcactcagaaaatggaaacctgcagcagagagtcaacgtcctg
acccacgagcttcagaagaggaaggagagagaggagcagctggaggatgtgatccaggcc
tacgagaagatccacatggagaagagcaacctccagagggatctcgacaagatgaccagc
ctggtggagaagcatgtcgagcgtatcctgaacctggagtcagctctgaggcagagagac
aactcactgcagaaactcaacatgcagctgcacagcaaagacatgcagtatctgcagctg
cacgccggcccagactcacacatgctggactgcccagcgctgacccttcagagctcccgc
agcctggacgcactgtccgacctgaagctgcagcggctggaggctgagctcgagggggcg
cggcacgaggcccagggggcgtgtcagcgggaagaggagctgaaggcagagtgcgagaga
ctgaaggaggagatgagacagctgcagaacagccagagggagagggaaatgacttctccg
tgcaagcagtgcgatgtggagtggataaagaaggtgggagatgagcaggtgaacttggct
ctggcctacacagagttaacagaggagctggggcgcctccaagcactgagctccaagcag
acggagatcctgaggaaagcctcacaggagcaggctagtccagttcagcgccactctccc
atccaccaccagcgccactctccagtatctcagcgccactcgcccatctcacagcgccat
tctccagtcccgcctccaccacagcactccccaatccaacagagacgctccccagtactg
cagcgcctctccccagacatgcaccgccgctcgcccctactggacgtcaacgacggaccg
gcctcttactcctgccggccgcccagccagcacctgagggccagtttccagggccggcga
agttactctgaggttgctgacccctcggcttaccagtgcccgccccgcttctctctggac
cctgtctccaccctgcctaagcctcggccttatgttgagggctacccaaaacaacagccc
caacacgtgggctctcctcacggtggactgcagcacaggagttccccgtctccccatcaa
agtggtgggggaggagacgggggccttggggagagctccatgcgccactccagagagatg
ccattcccactgtctgaggtggctcaccttcattttgagccccctcctccttccacaccg
gccccccagcccccacagtcctctgaagatgaggaggagtggacctgccctcatcccatc
agcccaccgcggacactgggagtgctctctgctgcagtgcccagcggtgtcatgagaggc
ccggcgtcctgctcagccttccccatccctcagaggcctaacaccctcagctgccaccct
cagcctgggtacatgtcagcggagcatgctcagtcctggccttcgatcaatctctggatg
gagactgaagagagcgacatgcggagctgccctctctgccagctgattttccctgttggt
taccctgacgatgccctcatcaagcacatcgactcccacctggagaacagcaagatctga
DBGET
integrated database retrieval system
