Lates calcarifer (barramundi perch): 108892104
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Entry
108892104 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-2-like
KO
K19013
stabilin-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108892104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108892104
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Hyaluronan
Cell surface receptors
108892104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_MSP1_1
EGF_Teneurin
FXa_inhibition
EGF
EGF_TEN
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
108892104
NCBI-ProteinID:
XP_018545061
UniProt:
A0AAJ7VBI9
LinkDB
All DBs
Position
LG18:complement(172929..194915)
Genome browser
AA seq
2547 aa
AA seq
DB search
MEVCQRLKLLVVSLMMMLMMKEMKTSAVSQQNFCSNSTVLRTRTACHSCSISLLIPCPSG
YKLTPGSTAQDCKYYVRTASLKLAISGCSFECYREVEVKNCCPGFWGPDCVECPDRADRP
CSNRGVCSDGLGGNGTCSCQVGFAGTACEDCSPGRYGPTCSSVCSCVHGLCDSGLKGDGH
CTCFSGYKGPNCDQDSPECAALRCQQNSRCMEEALTGRLLCQCLPGYQKSGDQCLSINPC
LQQVCHVHASCVHTGPNQHLCACHEGHSGDGRVCMAVDPCQTNQGGCSAESARCIYDGPG
KSHCECLPGFDNLANGGCSMKDSCRPDSCHKNANCSTVGPGRVECTCLQGYLGNGKVCYG
NIMQRLKDLNTEVGGQWGGQLTHAISLFDSLSWSLQNLGPFTVFVPINRGFRGLSMRTLL
ADSSKVKYLCKMHLVAGVMPFDTLKKSDSFYTLTGKSAETDTSGGDAYTTIRIHGSRKKG
MIVQPDVVASNGMIHIINKLMDSVSPTVESDTKENLMKIVSDYGKFDKFKSLLEKTDLSS
VLDLPGPITVFAPTTSAFDAMTEGHLTFLSSSEGHNKLVEFLRNHIVSSTSLEVYNAVSS
PRLVTMANQVLTINVTENGQILVNGAVVLEAAVEAKNGRLYVVDGVLTPPSIEPVLPHRC
DVTETKNVKGACVSCSMVPVSRCSSGVYTGSSIYGCVYSVSIGRPVVSIPVTGCSPLCNV
TITTPACCKGFYGPDCAPCPGGYQSPCSGHGQCMEGIQGNGSCTCDLNFRGSRCQFCSSS
NKHGPNCDTTCPCVHGQCDNRPDSDGRCKPDSCLTGFTGRFCERRTAACGAQVQFCHAHA
DCDFSQGMPRCVCKPGYQGDGITCVESDPCAPPVRGGCSVNAKCIKTGAGTHTCQCLSGW
REDGDDCRPINNCEAPDRGGCHPNATCIHVGPGQSDCSCKAGYKGNGRDCEPVNQCVTVT
GGCHYLASCRLLSSQWSCVCDEGYVGDGQICFGSVEQELMALPEASDFFKWTMDSGLSWS
LSDQNLTLLVPSSDAVTKMSLDDRNFWTTKGNLPSLIRNHMIPGNFPLSSLSSASSVTSL
LKTTFPVSTANEVTVVGGATITTSNIAATNGLIHIIDKVLVPDRKLSEGLLATLALRPEF
SLFRSYLIDYNLTDEIEHADEFTIFAPTDAAINDYLKKMAATALDVNTTRYHVVAAERLL
KTDLQPGGYKQTLLGFSFQLGIFPRDGKLFVNDAQINSSNILSGKGVIHGLSAVLQINRN
RCDEATYQKVPGTCVDCLFPQGKICPNDTVPDRSARTRKCMFTRVFEEERLLTLGCRATC
LQKNIVRRCCGGFFGERCEPCPGLQGRPCFGNGACLDGINGTGVCRCNRGFNGTACETCQ
SGKYGVHCDQDCGCKNGRCNEGPAGDGTCECDVGWRGVLCDEKIESKADELCGSVKCHTS
ANCVIGPSGPQCLCAAGFEGNGTVCQAKDACAVDNGGCSLYAVCKRTRPGRRDCVCNSGY
SGDGLICVEINPCLEGNGGCHVNADCVHVGPNKTSCSCSDGYSGDGQSCQMINLCRKKNG
GCHQFAVCNMTSPGVRTCTCANSFIGDGLSCRGTVGKEILTRKHRDFYLGLMMVEISLKG
RGPFTVFAPSSDAFSADKDKMKSLMSEKSKEQFASILRSHIVMCHTLLPVDLSQPRNLTS
LSGLVLTTSSVQGNIFINQANVTYSHDVSINGIFHEINRILFPPDLIKGPDVPLNLTDVA
ERHGYKTFYKLLQDTGVMDLVNDGMYQPVTIFLPSDAIMASLPQEQKDFLFHQHNRPQLV
EYLKYHILQAQKIYAEGLIHLDSGRTLQGSPLSFTCGGMDDIGEIFVNDEKCRIVQRHLV
FNGGIAYGIDCLLTPPSLGGRCDEQTTFDLQMSCGLCISSASRCPRGSKLKEIQKCDLPT
MFVTKNSGCRSICTVNFWQPKCCHGYHGRDCLVCPGGVGSPCSNRGKCDDGHLGNGTCTC
DAGFGGVACERCSDRFYGSTCKACNCSEHGSCDDGRRGTGACLCEAGWTGERCDAEQTEV
LRCSPPCSPKAVCKENNTCVCRPFYEGDGFTCTVVDMCQVWNGGCAKGAKCSQKGEKVSC
TCPKGHSGDGFTCQPIDPCISGDNGGCHEHATCTMTAPGKKKCTCKDNYVGDGLTCEVKQ
LLISRCLQDNGRCHQDAKCTDLHFEDATLGVFHYRSDKGQYKLNFTAAQQACTAEGGSLA
TYTQLSYAQQGGMNMCAAGWLDQARVAYPTTYSNPNCGFGHVGIVDYGVRKNLSETWDTF
CYRMKEVKCECKTGYVGDGFACTGNLLQVLRATPTFSNFFTQILNYSESSESGRQFVKRL
SNLTVQSTLFVADNDGLPDNQTLSQRDIEFHLSEGQALPLSQLKNGSRIRTRVGTLTVLG
VADLLDPSALSSRYVNDRFVTSSDILASNGIIHVLQGPLKAPPPRHEMHVAHKAGMGVGV
VLLIILVGGVVFVGYHFYTHTSKPFHFHYFKEEEEEEAAPPADGGRSICNPVYEAAPEAA
ESNTPDVPVEDKHEVVNGGAYDLLQDS
NT seq
7644 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttgtcagaggttaaagctgctggtcgtctctctgatgatgatgctgatgatg
aaggagatgaagacgtcagctgtatcacaacagaacttctgctccaactcgacggtgctg
aggactcggacggcctgtcactcctgtagcatcagcctgttgatcccctgcccttcaggg
tacaaactgacccccggctccaccgcccaggactgcaagtactacgtcagaaccgccagt
ctgaagttagccatcagcggctgctccttcgagtgttacagagaggtggaggtgaagaac
tgctgtccgggtttctggggtccagattgtgtcgagtgtccggaccgagctgacagaccc
tgttccaacagaggagtctgctccgacggactgggagggaacggcacctgcagctgtcag
gtgggttttgcaggaactgcatgtgaggactgttcacctggtcgatacggtcccacctgc
agctcagtgtgttcttgtgtccacggtctgtgtgactcggggttgaaaggtgacggtcac
tgcacctgtttctctggatacaaaggtccaaactgtgaccaagactcacctgagtgtgcg
gccctcaggtgtcagcagaactctcggtgtatggaggaggctctgacaggacggctgctg
tgtcagtgtttacctggctaccagaaatcaggagatcagtgtttgtccataaacccgtgt
ctgcagcaggtctgtcacgtccacgcctcctgtgtccacacggggccgaaccagcacctg
tgcgcctgtcatgaaggtcacagcggggacggacgagtctgcatggctgtcgatccatgt
cagaccaaccagggaggctgctccgccgagtctgcccgctgcatctacgacggaccaggg
aagtctcactgtgagtgtcttcctggttttgacaacctggctaacggcggctgcagcatg
aaggactcctgtagacctgattcctgtcacaagaacgccaactgttccaccgtgggtcca
ggacgagttgagtgtacctgtctccagggttacctaggtaacggtaaagtctgctacggg
aacatcatgcagcgtctgaaagacctgaacacagaggtcggaggacagtggggcggtcag
ctgacccacgccatctctctgtttgattctctgtcgtggtctctgcagaacctgggtcct
ttcactgtgtttgtcccgatcaatagaggcttcagaggactttcgatgaggactctgctc
gccgactcctccaaagttaaatacctgtgtaagatgcacctggttgctggggtgatgcca
tttgacactctgaagaaaagtgactccttttacactttgacggggaaatcagctgagacg
gacacgtcaggaggggacgcatacacgacaatccgtatccacggcagcaggaagaaagga
atgattgtccaaccagacgtggttgcctccaacgggatgatccacatcatcaataaactg
atggacagcgtctccccgactgtggagtctgacaccaaggaaaacctgatgaagattgtc
tctgactatgggaaatttgacaagttcaagtctttactagagaaaactgacctgtcctca
gtcctggacctccccggtccgatcaccgtctttgctccgaccacctcagctttcgatgcg
atgaccgaaggacacctgacgttcctcagcagctctgagggtcacaacaagctggtggag
tttctgaggaaccacatcgtctcatccacctcattggaggtctacaacgccgtatctagt
cccagactcgtgacaatggccaatcaggttctgacgattaacgtgacagaaaacggtcag
atcctggtgaacggagcggtggtgctcgaggcggctgtggaggctaagaacggacgcctg
tacgtcgttgacggcgttttgactccgccctccatcgaacccgtgctgccccacaggtgt
gacgtcaccgagaccaagaacgtcaagggcgcatgtgtgagctgctcaatggtcccagtg
tcccggtgttcgtcaggagtttacacaggctcctccatctatggatgtgtttactctgtt
tccatcggccgtccggtcgttagtatcccagtaaccggttgctccccactctgcaatgtc
accataacgactccagcgtgttgtaaaggtttctatggtccagactgtgccccctgtcca
ggaggataccagagtccctgttcaggacacggtcagtgtatggagggtatccagggaaac
gggtcgtgcacttgtgatctgaacttcagaggctctcgctgtcagttctgctcctcctcc
aacaaacatggaccaaactgtgacaccacctgtccctgtgtccacggtcagtgcgataac
cgcccggactccgacggtcgctgtaaaccggactcctgtctgaccgggttcaccggtcgg
ttctgcgaacgacggacggcagcgtgcggtgctcaggtgcagttctgtcacgcccacgcc
gactgtgacttcagccaggggatgccaaggtgtgtgtgtaaacctggttaccaaggcgac
gggatcacctgtgtggagtctgacccctgtgctccacctgtgcgaggcggctgcagtgtg
aacgccaaatgtataaagacaggagcagggactcacacctgtcagtgcctgagcgggtgg
agggaggacggagacgactgtcgaccaatcaacaactgtgaggctcctgacagaggaggc
tgtcaccccaacgccacctgcatccacgttggacctggacagagcgactgcagctgtaag
gccggatacaaagggaacggacgagactgtgagcctgttaatcagtgtgtcactgtgacc
ggaggctgccattacttagccagctgtcggctcctgtcctctcagtggagctgtgtctgt
gatgaagggtacgttggagacggtcagatctgtttcggttcggtggagcaggagctgatg
gctctgcctgaagcctccgacttcttcaaatggacgatggactccggtctgtcctggtct
ctgtcggatcagaacctcaccctcctggttccatcttcagacgctgtcacaaaaatgtct
ctggatgacagaaacttctggaccacgaagggaaacctgccgagtctcatcaggaatcac
atgatccctggtaactttccgttatccagcctgagctctgcttcctctgtcacttcactt
ctcaagacaacatttcctgtttcaacagccaatgaggtcacagtcgtgggtggagccacc
atcaccacatccaacatcgctgcgaccaacgggctgatccacatcatcgataaggtgttg
gttcctgacaggaagctgagcgaagggctgctggcgacgctcgctctgagacccgagttc
tcgctcttcagatcatatctcatcgattacaacctgacagacgagatcgaacacgccgat
gaattcaccatcttcgcgccgacagacgctgccatcaacgattacctgaagaaaatggct
gctactgccctggatgtgaatacgactcgttaccatgtggtggcagcagagcgtctgtta
aagactgacctgcagcccggtggatacaaacagacgctgctcggattctccttccagctc
ggcatcttcccccgagacggaaagctgtttgtgaacgacgctcagataaactcctccaac
atcctgagcggtaaaggagtgatccatggtctgtcggctgttctacagatcaacaggaac
cgctgcgacgaagcaacgtaccagaaagtcccgggaacgtgtgtcgactgtttgttccca
caaggcaaaatctgtcctaatgacaccgtcccagacagatcagccaggaccaggaagtgt
atgttcactcgggtgtttgaggaggagcgtctgctgaccctcggctgcagagccacctgc
cttcagaagaacattgtgcgcaggtgttgtggagggtttttcggggagcgctgcgagcca
tgtcccggtctgcagggtcgtccctgctttggtaatggagcgtgtttggacgggatcaac
gggaccggagtgtgtcggtgtaacagagggttcaatgggacggcctgtgagacctgtcag
agcgggaaatatggagtccactgcgaccaggactgtggctgtaaaaatggccgctgtaac
gaaggaccagcaggagacggcacgtgtgagtgtgacgtcggctggagaggagtcctctgt
gacgagaagattgagtctaaagctgatgaactgtgcggctcagtcaaatgtcacaccagc
gcaaactgtgtgatcggaccgtccggacctcagtgtctctgtgctgcaggatttgaagga
aacggaaccgtctgtcaagcgaaggacgcgtgtgcggtggataatggcggctgcagtctg
tacgccgtctgtaaaaggactcgacctggacgcagagactgtgtctgtaacagcggatac
tccggagacggactcatttgtgtcgagataaatccgtgtctggagggaaacggaggctgt
catgtcaacgcagactgcgttcacgtcggaccgaacaaaacttcctgttcctgcagtgac
ggttattccggtgatggacagagctgtcagatgatcaacttgtgtcgaaagaaaaatgga
ggctgccaccagttcgccgtgtgtaatatgaccagtccaggtgttcgtacctgcacgtgc
gccaacagcttcatcggagacggtctgagctgcagaggcaccgtggggaaggaaatcctg
acgaggaagcacagagacttctacctgggtctgatgatggtggagatttctctgaaaggt
cgaggcccgttcaccgtctttgctccgagcagcgacgccttcagcgccgacaaagacaag
atgaagtcgttgatgtcggagaaaagtaaagagcagttcgcctccattctgcgcagccac
atcgtcatgtgtcacactctgctgcccgtcgacctgagccaaccccgaaacctgacgtcg
ctgtccggactcgtcctgaccaccagctctgtccagggaaacatcttcatcaaccaggcg
aacgtgacatacagccacgacgtcagcatcaacgggatcttccatgagattaacaggatc
ctgtttcctccagacttgatcaagggtccagacgttcctctgaacctgaccgacgtggct
gaacgtcacggctataaaaccttttacaaactgctccaggacacaggtgtgatggacctg
gtgaacgatgggatgtatcagcctgtgaccatcttcctgccctcagatgccatcatggcg
tctctgccgcaggagcagaaggacttcctgttccatcaacacaaccgacctcagctggta
gagtacctgaagtaccacatcctgcaggcacagaagatttacgctgaaggtctgatccac
ttggactcaggtcggactctgcagggttcgccgctctccttcacctgtggaggaatggac
gatatcggagaaatctttgtgaatgacgagaagtgtcggatcgttcagagacacctcgtc
tttaacggcgggatcgcctatggcatcgactgcctgttgactccgcccagcctcggagga
cgctgcgatgaacagacgacctttgatctccagatgagttgtggactgtgcatctcctca
gcttctcgctgtcccagaggatccaaactaaaggagattcagaagtgcgaccttcccacc
atgtttgtcactaaaaactcgggctgtcgcagcatctgcaccgtcaacttctggcagcca
aagtgttgccatggttaccacggacgagactgtctggtgtgtcctggcggcgtgggctct
ccctgcagtaaccgtggtaaatgtgacgacggtcaccttggtaacggaacatgtacctgt
gacgccggtttcgggggcgtggcctgcgagcggtgcagcgacaggttttacggttcaacc
tgtaaagcctgtaactgctcagaacacgggtcatgtgacgatggacgcagaggtacgggg
gcgtgtctgtgtgaggcaggatggactggagagcgatgtgacgcggagcagactgaagtc
ttgaggtgttctccgccctgttctccaaaggctgtttgtaaggaaaacaacacctgcgtc
tgtcggccattttatgaaggagatgggttcacctgtacagttgtagacatgtgtcaggtc
tggaacggcggctgtgccaaaggagccaaatgttctcagaaaggagagaaggtgagctgc
acctgtcctaaaggtcactctggagatggcttcacctgtcagcccattgacccctgcatc
tctggggacaacggaggctgccatgaacacgccacctgcaccatgacggctccggggaag
aagaagtgcacctgtaaagacaactacgtcggagacggactcacctgtgaggtcaaacag
ctgctgatcagccgctgtctccaagacaacgggcgatgtcatcaggacgccaaatgtaca
gacctgcactttgaagatgcgacgcttggtgtgtttcactaccgctcagataaaggtcag
tacaaactgaacttcaccgcagctcagcaggcctgcactgcagagggaggcagcctggcc
acctacactcagctgtcctacgctcagcagggcgggatgaacatgtgcgccgccggctgg
ttggaccaggcccgagtggcgtaccccaccacctactccaaccccaattgtggcttcgga
cacgtcggcatcgtggactacggagtccgcaagaacctgagcgagacctgggacacgttc
tgctacaggatgaaggaggtgaagtgcgagtgtaagaccggctacgttggtgacggcttc
gcctgcacaggaaacctgctgcaggtgctcagagccacgcccaccttttccaacttcttc
acacaaatcctgaattactctgagtcgtcagagtccgggagacagtttgtgaagcgtctc
agtaacctgacggtccagtccacgctgttcgtcgccgacaatgacggcctccctgacaac
cagactttgtctcagagggacattgagttccacctgtccgagggtcaggcgctgcctctc
agccagttgaagaacggcagtcggatcaggaccagagtcgggactctgaccgtccttgga
gtcgcagacctgcttgatccctcggctctgtcgtctcgttacgtcaacgaccgcttcgtc
accagctcagacatcctggcctcaaacgggatcatacatgttctccagggccccctgaaa
gccccgcctcctcgccacgagatgcacgtggcgcacaaggcggggatgggggtcggagtg
gtgctgctgatcatcctggttgggggggtcgtcttcgtcggctaccacttctacacccac
acctccaaacccttccacttccactacttcaaggaggaggaggaggaggaggcagctcca
cctgcagatggcggtcgcagcatctgtaacccagtttacgaagcagctccagaagctgca
gagtccaacacgcctgacgtcccagtggaggacaaacacgaggtggtgaacggaggagca
tacgacctgctgcaggacagctga
DBGET
integrated database retrieval system
