Lates calcarifer (barramundi perch): 108892190
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Entry
108892190 CDS
T04895
Name
(RefSeq) heat shock 70 kDa protein 1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
lcf04010
MAPK signaling pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108892190
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108892190
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108892190
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108892190
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108892190
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108892190
03009 Ribosome biogenesis [BR:
lcf03009
]
108892190
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108892190
04131 Membrane trafficking [BR:
lcf04131
]
108892190
03051 Proteasome [BR:
lcf03051
]
108892190
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108892190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108892190
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108892190
Spliceosome [BR:
lcf03041
]
Complex B
Other components
Prp19 complex
108892190
Complex C
Prp19-CDC5 complex
108892190
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108892190
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP70 / DNAK
108892190
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108892190
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108892190
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108892190
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108892190
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108892190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
MIF4G
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
108892190
NCBI-ProteinID:
XP_018545138
UniProt:
A0AAJ7Q2R6
LinkDB
All DBs
Position
LG11:785572..788019
Genome browser
AA seq
639 aa
AA seq
DB search
MSAAKGVAIGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VALNPSNTVFDAKRLIGRKFDDSVVQADMKHWPFKVISDGGKPKIQVEYKGEDKAFYPEE
ISSMVLVKMKEIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGKSGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSIT
RARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILTGDTSGNVQDLLLLDVAPLSLGIETAGGVMTSLIKRNT
TIPTKQTQVFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQDADKYKAEDDLQRDKISA
KNSLESYAFNMKSSVQDENLKGKISEEDQKKVIEKCDETITWLENNQLADKEEYQHKQKE
LEKVCNPIISKLYQGGMPASSCREEARAGSQGPTIEEVD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagctaaaggtgtagcgatcggtatcgacctgggcaccacctactcctgtgtg
gggattttccagcatgggaaagtagaaatcatcgccaacgaccagggcaacaggaccacc
cccagctatgtggccttcactgacaccgagaggctgattggggacgccgccaagaaccag
gtggctctgaaccccagcaacactgtgtttgatgccaagagactgattggaagaaagttt
gatgattcagtggtgcaggctgacatgaagcactggcccttcaaggtgatttcagatgga
gggaagcccaaaattcaggtggagtacaaaggtgaagacaaagccttctaccctgaggag
atctcctccatggtcctggtgaagatgaaggagatcgctgaggcctacctcggccaaaag
gtgtccaacgctgtcatcacagtcccggcgtacttcaacgactcccagcgacaggcgact
aaagacgcaggcgtcatcgcaggactgaacgtcctgaggatcatcaacgagccgacggca
gccgccatcgcgtacggtctggacaaaggaaagtcaggagaacgtaacgtcctgatcttt
gacctgggtggaggcaccttcgacgtgtccatcctgacaatcgaagacggtatctttgag
gtgaaagccacggccggagacactcacctgggtggagaggactttgacaatcgcatggtc
aaccactttgtggaggagttcaagaggaaacacaagaaagacatcagccagaacaagaga
gccctgaggaggctgcgcacagcttgtgaaagggccaagaggaccctgtcctccagctcc
caggccagcattgagatcgattctctgtttgagggcatcgacttctacacctccatcacc
agggctcgctttgaggagctgtgctccgacctgttcaggggaacattagagccggtggag
aaagccctgagagacgccaaaatggacaaggctcagatccacgacatcgtcctggtggga
ggctccacccgaatccccaaaatccagaaactcctgcaggacttcttcaacggcagggag
ctgaacaagagcatcaacccagatgaggcggtggcttacggcgccgccgtccaggctgcc
atcctcacaggtgatacctcaggcaacgttcaggacctgctgctgctggacgtggcgcct
ctgtccctgggtatcgagacggccggaggagtcatgacgtccctgattaaacgcaacacc
accatccccaccaaacaaacccaggtgttctccacctactctgacaaccagcccggggtc
ctcatccaggtgtacgaaggagaaagagccatgaccaaggacaacaacctgctgggcaag
tttgagctgacaggaatccctcctgctcctcgaggggtcccacagatcgaggtcaccttc
gacattgacgccaacggcattttgaacgtgtctgcggtggacaaaagcaccggcaaagaa
aacaagatcaccatcaccaacgacaagggccgactgagcaaagaggagatcgagaggatg
gtgcaggacgctgacaaatacaaagctgaggacgaccttcagagggacaagatctctgcc
aagaactccctggagtcctacgccttcaacatgaagagcagtgtgcaggatgagaacctg
aagggcaaaattagtgaggaggaccagaagaaggtgattgagaagtgtgacgagaccatc
acctggctggagaacaaccagctggctgataaagaggagtaccaacacaagcagaaagag
ctggagaaagtgtgtaaccccatcatcagcaagttgtatcagggaggaatgcctgcaagt
agctgtagggaggaggcacgagccggctcccaggggcccactattgaggaggtggactaa
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