Lates calcarifer (barramundi perch): 108892199
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Entry
108892199 CDS
T04895
Name
(RefSeq) stabilin-2
KO
K19013
stabilin-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108892199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108892199
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Hyaluronan
Cell surface receptors
108892199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_Teneurin
FXa_inhibition
cEGF
EGF
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
108892199
NCBI-ProteinID:
XP_018545151
UniProt:
A0AAJ7VBL6
LinkDB
All DBs
Position
Unknown
AA seq
1364 aa
AA seq
DB search
MAATALDVNTTRYHVVAAERLLKTDLQPGGYKQTLLGFSFQLGIFPRDGKLFVNDAQINS
SNILSGKGVIHGLSAVLQINRNRCDEATYQKVPGTCVDCLFPQGKICPNDTVPDRSARTR
KCMFTRVFEEERLLTLGCRATCLQKNIVRRCCGGFFGERCEPCPGLQGRPCFGNGACLDG
INGTGVCRCNRGFNGTACETCQSGKYGVHCDQDCGCKNGRCNEGPAGDGTCECDVGWRGV
LCDEKFESKADELCGSVKCHTSANCVIGPSGPQCLCAAGFEGNGTVCQAKDACAVDNGGC
SLYAVCKRTRPGRRDCVCNSGYSGDGLICVEINPCLEGNGGCHVNADCVHVGPNKTSCSC
SDGYSGDGQSCQMINLCRKKNGGCHQFAVCNMTSPGVRTCTCANSFIGDGLSCRGTVGKE
ILTRKHRDFYLGLMMVEISLKGRGPFTVFAPSSDAFSADKDKMKSLMSEKSKEQFASILR
SHIVMCHTLLPVDLSQPRNLTSLSGLVLTTSSVQGNIFINQANVTYSHDVSINGIFHEIN
RILFPPDLIKGPDVPLNLTDVAERHGYKTFYKLLQDTGVMDLVNDGMYQPVTIFLPSDAI
MASLPQEQKDFLFHQHNRPQLVEYLKYHILQAQKIYAEGLIHLDSGRTLQGSPLSFTCGG
MDDIGEIFVNDEKCRIVQRHLVFNGGIAYGIDCLLTPPSLGGRCDEQTTFDLQMSCGLCI
SSASRCPRGSKLKEIQKCDLPTMFVTKNSGCRSICTVNFWQPKCCHGYHGRDCLVCPGGV
GSPCSNRGKCDDGHLGNGTCTCDAGFGGVACERCSDRFYGSTCKACNCSEHGSCDDGRRG
TGACLCEAGWTGERCDAEQTEVFRCSPPCSPKAVCKENNTCVCRPFYEGDGFTCIVVDMC
QVWNGGCAKGAKCSQKGEKVSCTCPKGHSGDGFTCQPIDPCISGDNGGCHEHATCTMTAP
GKKKCTCKDNYVGDGLTCEVKQLLISRCLQDNGRCHQDAKCTDLHFEDATLGVFHYRSDK
GQYKLNFTAAQQACTAEGGSLATYTQLSYAQQGGMNMCAAGWLDQARVAYPTTYSNPNCG
FGHVGIVDYGVRKNLSETWDTFCYRMKEVKCECKTGYVGDGFACTGNLLQVLRATPTFSN
FLTQILNYSESSESGRQFVKRLSNLTVQSTLFVANNDGLPDNQTLSQRDIEFHLSEGQAL
PLSQLKNGSRIRTRVGTLTVLGVADLLDPSALSSRYVNDRFVTSSDILASNGIIHVLQGP
LKAPPPRHEMHVVHKAGMGVGVVLLIILVGGVVFVGYHFYTHTSKPFHFHYFKEEEEEEA
APPADGGRSICNPVYEAAPETPDVPVEDKHEVVNGGAYDLLQDS
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgccctggatgtgaatacgactcgttaccatgtggtggcagcagagcgt
ctgttaaagactgacctgcagcccggtggatacaaacagacgctgctcggattctccttc
cagctcggcatcttcccccgagacggaaagctgtttgtgaacgacgctcagataaactcc
tccaacatcctgagcggtaaaggagtgatccatggtctgtcggctgttctacagatcaac
aggaaccgctgcgacgaagcaacgtaccagaaagtcccgggaacgtgtgtcgactgtttg
ttcccacaaggcaaaatctgtcctaatgacaccgtcccagacagatcagccaggaccagg
aagtgtatgttcactcgggtgtttgaggaggagcgtctgctgaccctcggctgcagagcc
acctgccttcagaagaacattgtgcgcaggtgttgtggagggtttttcggggagcgctgc
gagccatgtcccggtctgcagggtcgtccctgctttggtaatggagcgtgtttggacggg
atcaacgggaccggagtgtgtcggtgtaacagagggttcaatgggacggcctgtgagacc
tgtcagagcgggaaatatggagtccactgcgaccaggactgtggctgtaaaaatggccgc
tgtaacgaaggaccagcaggagacggcacgtgtgagtgtgacgtcggctggagaggagtc
ctctgtgacgagaagtttgagtctaaagctgatgaactgtgcggctcagtcaaatgtcac
accagcgcaaactgtgtgattggaccgtccggacctcagtgtctctgtgctgcaggattt
gaaggaaacggaaccgtctgtcaagcgaaggacgcgtgtgcggtggataatggcggctgc
agtctgtacgccgtctgtaaaaggactcgacctggacgcagagactgtgtctgtaacagc
ggatactccggagacggactcatttgtgtcgagataaatccgtgtctggagggaaacgga
ggctgtcatgtcaacgcagactgcgttcacgtcggaccgaacaaaacttcctgttcctgc
agtgacggttattccggtgatggacagagctgtcagatgatcaacttgtgtcgaaagaaa
aatggaggctgccaccagttcgccgtgtgtaatatgaccagtccaggtgttcgtacctgc
acgtgcgccaacagcttcatcggagacggtctgagctgcagaggcaccgtggggaaggaa
atcctgacgaggaagcacagagacttctacctgggtctgatgatggtggagatttctctg
aaaggtcgaggcccgttcaccgtctttgctccgagcagcgacgccttcagcgccgacaaa
gacaagatgaagtcgttgatgtcggagaaaagtaaagagcagttcgcctccattctgcgc
agccacatcgtcatgtgtcacactctgctgcccgtcgacctgagccaaccccgaaacctg
acgtcgctgtccggactcgtcttgaccaccagctctgtccagggaaacatcttcatcaac
caggcgaacgtgacatacagccacgacgtcagcatcaacgggatcttccatgagattaac
aggatcctgtttcctccagacttgatcaagggtccagacgttcctctgaacctgaccgac
gtggctgaacgtcacggctataaaaccttttacaaactgctccaggacacaggtgtgatg
gacctggtgaacgatgggatgtatcagcctgtgaccatcttcctgccctcagatgccatc
atggcgtctctgccgcaggagcagaaggacttcctgttccatcaacacaaccgacctcag
ctggtagagtacctgaagtaccacatcctgcaggcacagaagatttacgctgaaggtctg
atccacttggactcaggtcggactctgcagggttcgccgctctccttcacctgtggagga
atggacgatatcggagaaatctttgtgaatgacgagaagtgtcggatcgttcagagacac
ctcgtctttaacggcgggatcgcctatggcatcgactgcctgttgactccgcccagcctc
ggaggacgctgcgatgaacagacgacctttgatctccagatgagttgtggactgtgcatc
tcctcagcttctcgctgtcccagaggatccaaactaaaggagattcagaagtgcgacctt
cccaccatgtttgtcactaaaaactcgggctgtcgcagcatctgcaccgtcaacttctgg
cagccaaagtgttgccatggttaccacggacgagactgtctggtgtgtcctggcggcgtg
ggctctccctgcagtaaccgtggtaaatgtgacgacggtcaccttggtaacggaacatgt
acctgtgacgccggtttcgggggcgtggcctgcgagcggtgcagcgacaggttttacggt
tcaacctgtaaagcctgtaactgctcagaacacgggtcatgtgacgatggacgcagaggt
acgggggcgtgtctgtgtgaggcaggatggactggagagcgatgtgacgcggagcagact
gaagtcttcaggtgttctccgccctgttctccaaaggctgtttgtaaggaaaacaacacc
tgcgtctgtcggccattttatgaaggagatgggttcacctgtatagttgtagacatgtgt
caggtctggaacggcggctgtgccaaaggagccaaatgttctcagaaaggagagaaggtg
agctgcacctgtcctaaaggtcactctggagatggcttcacctgtcagcccattgacccc
tgcatctctggggacaacggaggctgccatgaacacgccacctgcaccatgacggctccg
gggaagaagaagtgcacctgtaaagacaactacgtcggagacggactcacctgtgaggtc
aaacagctgctgatcagccgctgtctccaagacaacgggcgatgtcatcaggacgccaaa
tgtacagacctgcactttgaagatgcgacgcttggtgtgtttcactaccgctcagataaa
ggtcagtacaaactgaacttcaccgcagctcagcaggcctgcactgcagagggaggcagc
ctggccacctacactcagctgtcctacgctcagcagggcgggatgaacatgtgcgccgcc
ggctggttggaccaggcccgagtggcgtaccccaccacctactccaaccccaattgtggc
ttcggacacgtcggcatcgtggactacggagtccgcaagaacctgagcgagacctgggac
acgttctgctacaggatgaaggaggtgaagtgcgagtgtaagaccggctacgttggtgac
ggcttcgcctgcacaggaaacctgctgcaggtgctcagagccacgcccaccttttccaac
ttcctcacacaaatcctgaattactctgagtcgtcagagtccgggagacagtttgtgaag
cgtctcagtaacctgacggtccagtccacgctgttcgtcgccaacaatgacggcctccct
gacaaccagactttgtctcagagggacattgagttccacctgtccgagggtcaggcgctg
cctctcagccagttgaagaacggcagtcggatcaggaccagagtcgggactctgaccgtc
cttggagtcgcagacctgctcgatccctcggctctgtcgtctcgttacgtcaacgaccgc
ttcgtcaccagctcagacatcctggcctcaaacgggatcatacatgttctccagggcccc
ctgaaagccccgcctcctcgccacgagatgcacgtggtgcacaaggcggggatgggggtc
ggagtggtgctgctgatcatcctggttgggggggtcgtcttcgtcggctaccacttctac
acccacacctccaaacccttccacttccactacttcaaggaggaggaggaggaggaggcg
gctccacctgcagatggcggtcgcagcatctgtaacccagtttacgaagcagctccagaa
acgcctgacgtcccagtggaggacaaacacgaggtggtgaacggaggagcgtacgacctg
ctgcaggacagctga
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