Lates calcarifer (barramundi perch): 108892212
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Entry
108892212 CDS
T04895
Name
(RefSeq) heat shock 70 kDa protein 1-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
lcf04010
MAPK signaling pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108892212
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108892212
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108892212
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108892212
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108892212
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108892212
03009 Ribosome biogenesis [BR:
lcf03009
]
108892212
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108892212
04131 Membrane trafficking [BR:
lcf04131
]
108892212
03051 Proteasome [BR:
lcf03051
]
108892212
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108892212
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108892212
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108892212
Spliceosome [BR:
lcf03041
]
Complex B
Other components
Prp19 complex
108892212
Complex C
Prp19-CDC5 complex
108892212
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108892212
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP70 / DNAK
108892212
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108892212
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108892212
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108892212
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108892212
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108892212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
MIF4G
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
108892212
NCBI-ProteinID:
XP_018545162
UniProt:
A0AAJ8DM50
A0AAJ7Q2Q5
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSAAKGVAIGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VALNPSNTVFDAKRLIGRKFDDSVVQADMKHWPFKVISDGGKPKIQVEYKGEDKAFYPEE
ISSMVLVKMKEIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGKSGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSIT
RARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILTGDTSGNVQDLLLLDVAPLSLGIETAGGVMTSLIKRNT
TIPTKQTQVFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQDADKYKAEDDLQRDKISA
KNSLESYAFNMKSSVQDENMKGKISEEDQKKVIEKCDETITWLENNQLADKEEYQHQQKE
LEKVCNPIISKLYQGGMPASSCREEARAGSQGPTIEEVD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagctaaaggtgtagcgatcggtatcgacctgggcaccacctactcctgtgtg
gggattttccagcatgggaaagtagaaatcatcgccaacgaccagggcaacaggaccacc
cccagctatgtggccttcactgacaccgagaggctgattggggacgccgccaagaaccag
gtggctctgaaccccagcaacactgtgtttgatgccaagagactgattggaagaaagttt
gatgattcagtggtgcaggctgacatgaagcactggcccttcaaggtgatttcagatgga
gggaagcccaaaattcaggtggagtacaaaggtgaagacaaagccttctaccctgaggag
atctcctccatggtcctggtgaagatgaaggagatcgctgaggcctacctcggccaaaag
gtgtccaacgctgtcatcacagtcccggcgtacttcaacgactcccagcgtcaggcgact
aaagacgcaggcgtcatcgcaggactgaacgtcctgaggatcatcaacgagccgacggca
gccgccatcgcgtacggtctggacaaaggaaagtcaggagaacgtaacgtcctgatcttt
gacctgggtggaggcaccttcgacgtgtccatcctgacaatcgaagacggtatctttgag
gtgaaagccacggccggagacactcacctgggtggagaggactttgacaaccgcatggtc
aaccactttgtggaggagttcaagaggaaacacaagaaggacatcagccagaacaagaga
gccctgaggaggctgcgcacagcttgtgagagggccaagaggaccctgtcctccagctcc
caggccagcatcgagatcgattctctgtttgagggcatcgacttctacacctccatcacc
agggctcgctttgaggagctgtgctccgacctgttcaggggaacattagagccggtggag
aaagccctgagagacgccaaaatggacaaggcacagatccacgacatcgtcctggtggga
ggctccacccgaatccccaaaatccagaaactcttgcaggacttcttcaacggcagggag
ctgaacaagagcatcaacccagatgaggcggtggcttacggcgccgccgtccaggccgcc
atcctcacaggtgatacctcaggcaacgttcaggacctgctgctgctggacgtggcgcct
ctgtccctgggtatcgagacggccggaggagtcatgacgtccctgataaaacgcaacacc
accatccccaccaaacaaacccaggtgttcaccacctactctgacaaccagcccggggtc
ctcatccaggtgtacgaaggtgaaagagccatgaccaaggacaacaacctgctgggcaag
tttgagctgacaggaatccctcctgctcctcgaggggtcccacagatcgaggtcaccttc
gacatcgacgccaacggcattttgaacgtgtctgcggtggacaaaagcaccggcaaagaa
aacaagatcaccatcaccaacgacaagggccgactgagcaaagaggagatcgagaggatg
gtgcaggacgctgacaaatacaaagctgaggacgaccttcagagggacaagatctctgcc
aagaactccctggagtcctacgctttcaacatgaagagcagtgtgcaggatgagaacatg
aagggcaaaattagtgaggaggaccagaagaaggtgattgagaagtgtgacgagaccatc
acctggctggagaacaaccagctggctgataaagaggagtaccaacaccagcagaaagag
ctggagaaagtgtgtaaccccatcatcagcaagttgtatcagggaggaatgcctgcaagc
agctgtagggaggaggcacgagccggctcccaggggcccactattgaggaggtggactaa
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