Lates calcarifer (barramundi perch): 108892257
Help
Entry
108892257 CDS
T04895
Name
(RefSeq) tetratricopeptide repeat protein 39B
KO
K24943
tetratricopeptide repeat protein 39
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108892257
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
108892257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
TPR_2
TPR_12
TPR_1
TPR_8
TPR_16
TPR_19
TPR_7
TPR_6
TPR_Slam
TPR_NPHP3
SOAR
Motif
Other DBs
NCBI-GeneID:
108892257
NCBI-ProteinID:
XP_018545223
UniProt:
A0AAJ7Q2U6
LinkDB
All DBs
Position
LG9:20819592..20840006
Genome browser
AA seq
580 aa
AA seq
DB search
MAHVGNGATAEDEDCFEDAYDRIPAACQMDLQTAIQETQCALNLVLNNKFSEALDLLKPW
WRDSMYHALGYSSILVMQATMTFEHRDIQTAMATIKEALHTCQRFRKKNSMVGSLSSLIS
KQSNLQEEEMHAEICYAECLLQKATLTFVQDENMISFIKGGIKIRTSYQIYKDCQNVLNV
TQDLAGQSDSFRQFEGGVKLGIGSFNLMLSLLPQRILRLLEFIGFSGNRGFGLSQLREGA
SSHSLRSILCALTLLFYHTYVSLILGTGEGNLVEAEALLEPYQHKYPKGSIILFYSARIA
TLRGNFEKARARYEECISSQQEWKQIHHLCYWELMWTHSYQQEWQQAYRYADLLCKESRW
SKAIYVYQKAAILSMMSEEEVKKTGENIVELFRQVEGLKQRLAGKSIPTEKFAVRKSRRY
KAANLIPLVIPALEMMYVWNGFTIVGKRADSTEALLVTIEAAEEQLRNDPNPSEFHPDDS
CLVQMLKGLCLKHLGRLLQAELCFTQVLSSESRIRYDHYLIPFTLYELGLLYKQQGDFAK
ATTYIENAKTNYKDYSMESRLHFRIHAALNSLKGSPVGTP
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgtaggcaacggagcgaccgccgaggatgaggactgctttgaagatgcatac
gaccggatacctgctgcatgtcagatggacctgcagacagctattcaggagactcagtgt
gctctgaacttggtcctcaacaacaagttctctgaagccctggacctcctcaaaccatgg
tggagggacagtatgtaccatgcgttgggttacagcagcatcctggtgatgcaggcgacc
atgacgtttgaacacagagacatccagactgccatggcaaccatcaaagaggcgttacac
acctgtcagaggttcaggaagaagaactcgatggttggatctttgtccagtctgatcagc
aagcagtcaaacctgcaggaagaggaaatgcatgcagagatctgctatgctgagtgtctg
ctgcagaaagccacgctgacatttgtacaggatgagaacatgatcagctttatcaaagga
ggcatcaaaattcgaacaagctaccaaatctacaaggactgtcagaatgtgctgaatgtc
actcaggatctggccggccagtctgattcgttcagacagtttgaaggcggagtcaagctc
ggcatcgggtcctttaacctgatgttgtctctcctccctcagaggattttgaggttgctg
gaattcattggattctcaggaaacagggggtttggtttgtctcagttgagagagggagcc
tccagtcacagtttgcggtcgatcctctgcgctctgactttgctcttttaccacacatac
gtttcattgatacttggaaccggggaggggaacctggtggaggctgaagctctgctggag
ccgtaccaacacaaataccccaaaggctccattatactcttctactctgctcgcatcgcc
acgctacgaggaaactttgagaaggcccgggccaggtacgaggagtgtatcagcagccag
caggaatggaagcagatccaccacctctgttactgggagctgatgtggacccactcctac
cagcaggagtggcagcaggcgtatcgttacgccgacctgctgtgcaaggagagccgctgg
tccaaggccatctacgtgtaccagaaagcagccatcctcagtatgatgtcagaagaggaa
gtgaagaagactggggagaacatcgttgagctcttcagacaggtggaggggctgaaacaa
cgtctggcagggaagtcgatccccacagagaaatttgcagtgaggaagtccaggcgctac
aaagctgctaacctcatcccactggtcatccctgcactggagatgatgtacgtttggaac
ggcttcaccatcgtagggaagcgagccgacagtactgaggccctgctggtgaccatcgag
gcggctgaggagcagctacgcaacgaccccaatccatcagagtttcatccagacgacagc
tgtctggtccagatgttgaagggactctgtctgaaacacctgggcaggttacttcaggct
gagctctgcttcacacaggtcttgtccagtgagagtcgtatcagatatgatcactacttg
attcccttcactctctatgagttgggtctgctgtataaacaacagggagacttcgccaag
gccaccacatacatcgaaaatgccaagacaaactacaaggactactccatggagtccaga
ctgcacttcaggatccatgcagccctcaacagcctcaaaggatcacctgtcggcacccca
taa
DBGET
integrated database retrieval system
