Lates calcarifer (barramundi perch): 108892274
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Entry
108892274 CDS
T04895
Name
(RefSeq) cingulin-like protein 1 isoform X1
KO
K21110
cingulin-like protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108892274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
CCDC39
FKBP15
CENP-F_leu_zip
CEP131_C
PUMA_CC
Taxilin
T4SS_LegC2C7
Rod_CreS
Filament
CEP135_TSGA10_CC
DUF1664
Motif
Other DBs
NCBI-GeneID:
108892274
NCBI-ProteinID:
XP_018545247
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MESHRLSGSPDIRIQRDYTQQHSPRGSQDNLFGVRVQVQGIKGQPYVVLNSSGQESHRDI
SVITHQAGYNPGMVRRSVDERHSPAETQRTAASPVFHYQKHPEILRPYDPESNNLNLVIP
SQTRPGLPPETNQTVNMTKPRIPLPAEGPGGDQVEVAQDKSPPSGGHLPARTPNSVDTDS
ILSVGRLISQFNNSQRRGRGAPRNRLDPEQCRRSRSVDSGRISDSSSSSSSSSIPSSLKS
VRGETPGGVYPPGSARARLLGREACVGNKKEENKTSTLQGHHGKEMMSPHAAKLLHRREK
PSLSGSCSDQTDDSDERDTQVTPDLLKGQQELSVDSTEDTTTKQILFTYLKNGTTDDDST
TEKKVNLLLERINKLKWRTAENVEEEEKNYEAEVEQLQEKQAALESEVSELKQKLETEVK
NEKTLAKACEKARTEKKKLQEELTKSQTELSKLRDRLAEIEAELQSTKRELSQMKAERER
SRTEMKDLQQQLSEMHDELDQAKKAEVINTEKEILLKDMVQMRADFQEMLQVKEEQEEVL
HRRERELSALKGALKDEVETHDKYIAALKDEYEQELEKLLRDLDLAKESNALLGKEKVEA
EEEKGAAKVQLKELSQERDQLRGKVQELNKKVDQLNQAIQEAKTTERLLEQRAKQLEREK
QQVEETLKDVRRNEEEMCQSNQSLLARLEDVQGKMTKLNHEHRDLKEKLKEERRQREELW
KMKTELEDERRLQDRAVEQLQRKMNSIMEECEASTDVLQNQVDEAREKSQRELAELRRQL
QEKGAELEKSRQAAKKLQEELLPLEEDLQRCRREQQEAQLRGRELEQRVEELENRNAAIA
EERERQVKLMEGHISNLEEDLNDERSSADRLMERLDKTKEQMDQIRNELMQERAVRQDLE
CDKMSLERQNKDLKSRVTHLEGSQRSNQDSLVSKLNSRIQELEERLQGEERDNNSLQQAN
RKLERKVKEMKMQADEETINLQNHRDQLTQRLKTAKRQMDEAEEEIERLEHAKKKLQREL
DEQIEANEQLHGQLSALRNEMRRKKKSPPLIKAVEDDAKDMDDFGSD
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcacagactgagtggctctccagacatcaggatacagagggactacacgcag
cagcacagtccaagaggaagccaggacaacttgtttggagtgagggtgcaggttcaaggg
attaaaggtcaaccttacgtggttctgaacagttctggccaggagagccacagggacatc
tctgtcatcactcaccaggcaggatacaacccggggatggtgaggaggtctgtggatgaa
agacactctccagctgagacacagaggactgcagcctcccctgtttttcattatcagaaa
cacccagagattctgagaccttatgaccctgaaagtaataacctgaacctggtcatccct
tcacaaacccgacctggactcccccctgagacaaaccagactgttaacatgaccaaaccc
aggatccctctgccagctgaaggcccagggggagaccaggttgaggtggcccaagacaag
tcacctccctcaggtggacacctccctgcgaggaccccaaactcagtggacacagactcc
atcttatcagtggggaggctgataagccagttcaacaacagccaacggaggggaaggggt
gcccccaggaacaggctggacccagagcagtgtcggaggtcgcgcagcgtggacagtggg
cgaatctcggactcctcctcgtcctcctcttcttccagcataccctcgtctctgaagagc
gtaaggggggagaccccaggtggggtgtatcctcctgggtcagccagggctcgactcctc
ggcagagaggcctgtgtggggaataaaaaggaggagaacaagactagcacactgcaagga
catcatggaaaagagatgatgtctccacatgctgcaaaactgcttcacagaagagagaaa
ccctctctctctggatcatgtagtgaccagactgatgattctgatgaaagagatacacag
gtcactcctgatcttctgaaaggacagcaagaactctcagtggactcaactgaagacaca
acaacaaaacaaatactgttcacgtacctcaagaatgggacgactgatgatgactccacc
actgagaagaaagtcaacctactgcttgaaaggatcaacaagctcaagtggaggactgct
gagaatgtggaggaggaggagaaaaattatgaagctgaagtggagcagttgcaggagaaa
caggcagcgctggagagcgaagtatctgagttaaagcaaaaactggaaactgaggtgaag
aatgaaaagactctagccaaggcctgtgagaaggccaggacagagaagaagaaacttcag
gaagagctgaccaaaagtcagacagagctcagcaaactcagggacagactggctgaaatc
gaggcagaacttcagtccaccaaacgggaattgagtcagatgaaggcagagagagaaaga
tctaggacggagatgaaagaccttcagcagcagctctctgagatgcacgatgagctggac
caagccaagaaggcggaggtgataaatacggagaaagaaatccttctgaaggatatggtg
cagatgcgtgcagacttccaggagatgctgcaggtgaaggaggagcaggaggaggtgctg
caccggcgggaaagggagctcagcgccctgaagggggcgctcaaagacgaggtggagact
catgacaagtacatcgccgctctgaaggatgaatacgagcaggagctggagaagctgctc
agggatttagatctggccaaagagagcaatgctctgctgggtaaagagaaggtggaggca
gaggaggagaaaggtgcagccaaggtgcagctgaaggagctcagccaggagagagatcag
ctgagaggaaaggtgcaggagctcaacaagaaagtggatcagctaaaccaggcaatccag
gaggctaaaaccacagagagactgctggagcagagagcaaagcagctggagagggaaaag
cagcaggtggaggaaacgctaaaggatgtgaggaggaatgaggaggagatgtgtcagtca
aaccagtcgctcctcgctcggttggaggacgtgcagggtaagatgaccaaactcaatcat
gagcaccgggacctgaaggagaaactcaaggaggagaggagacaaagagaggagctgtgg
aagatgaaaaccgagctggaggacgagaggaggctgcaggaccgggcggtggagcaactg
cagaggaagatgaatagcatcatggaggagtgcgaggcgtctacagatgtacttcagaac
caggtcgacgaggccagagaaaagagtcagagggagttggccgagctgcggagacagctg
caggaaaagggagcagagcttgagaaatcccgacaggcagccaaaaagctgcaggaagag
ctccttcctctggaggaggatctgcagcggtgtcgcagggagcagcaggaggcccagctg
aggggccgggagctggagcagagggtggaggagctggagaacaggaacgcagccatagca
gaggagagagagcggcaggttaaactcatggagggacacatcagtaacctagaggaggat
cttaatgatgagcgcagcagtgctgaccgcctgatggagcggctagacaaaaccaaagag
cagatggatcagattaggaatgagctgatgcaggagagagcagtcagacaggacctggag
tgtgacaagatgagcctggagagacagaataaagacctgaagagcagagtgactcatctg
gaaggatcacagaggtccaaccaagattcactggtctccaaacttaacagccgcatccag
gaactggaggagaggctgcaaggagaagaacgggacaacaacagcctgcaacaagccaac
cgcaagctggagcgcaaagtgaaggagatgaagatgcaggcagacgaggaaaccatcaac
ctacagaaccacagagaccagctgactcagaggctgaagacagcgaagaggcagatggat
gaggcggaggaggagattgagcgtctggaacacgccaaaaagaagctgcagagagaactg
gacgagcagatcgaggccaacgagcagcttcacggccaactgagcgcattgaggaatgag
atgaggcgaaagaagaaatcacctcctctcattaaggctgtggaggatgatgcaaaagac
atggatgactttggctccgactga
DBGET
integrated database retrieval system
