Lates calcarifer (barramundi perch): 108892319
Help
Entry
108892319 CDS
T04895
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108892319
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108892319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
LRR_6
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_4
SPRY
DUF4329
Motif
Other DBs
NCBI-GeneID:
108892319
NCBI-ProteinID:
XP_050923904
UniProt:
A0AAJ8B0V3
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MNQSEDREEGVPPSKTTLCGEHESQTKAQSPEQQHSPHSAGPGPGPGPGPVFMKSDWSMD
HDGYFKQSFGSFRIQQQRPDSPESSCLSLKSDNSKGFFIDFKGRRPSADQIVDQESSEVP
SGQSAQQHQTHLDSIFMLLEENIVTFVKNELKKMQKVLSLDYPECLESQREDEEVLDSDD
EEQRRSSREEFLKITLNFLRRMKQEELADCLQSRHFAPVCRRKLKSNLKKKFQCLFEGIS
KAGNPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPDRPETTIRQEDIFKASPGR
DEPIRTVMTKGVAGIGKTVLTQKLTLDWAEDKANQDIHFTFPFTFRELNVLKEKKLSLVE
LVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNL
IRGKLLPSACLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEDQASRII
SHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQTKLKTIK
YDGGSGTDPHWNKKSRKMIKTLGKLAVEQLQKGNLIFYESDLTECGIDIRAASVYSGVFT
QIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLLEEQTTTRWSKLFRNKP
EPTQFYQRTVDKALQSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSGSWTNQETVQY
IKKKIEETPSAEKSINLFHCLNELNDRSLVEEIQQSLSSGRLSTDKLSPAQWSALVFILL
SSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSSL
RDLDLSNNNLQDSGVKMLSVGLESPHCSLETLRLSDCNLSERSCEALSSVLSSQSSSLRD
LDLSNNNLQDSGVKMLSVGLESPHCSLETLRLSGCNLSERSCEALSSVLSSQSSSLRDLD
LSNNNLQDSGVKMLSAGLESPHCSLETLSLDQTRLTEKSCQEISSVLSSQSSSLRDLDLS
NNNLQDSGVKMLSVGLESPHCSLETLRLNQTSLTEKSCQEISSVLSSQSSSLRDLDLSNN
NLQDSGVKMLSVGLESSHCSLETLSLSGCLISEEGCASLVSALSSNPSHLRELDLSYNHP
GDSGVKLLSAGLKDPGWRLDTLRVEPGGVRWLTPGLRKYSCQLTIDTNTVNRFLKLSDNN
RKVTLVEEDQSYPDHPDRFDPCPQLLCRTGLTGRCYWEVEWRGDVYISVSYRGIRRKGGR
DCLFGLNDQSWRLRCSDVSGYSVCHNNRGTYISSSSSSSSSSSSVSNRVAVYVDCPAGSL
SFYRVSSDSLIHLHTFNTTFTQPLYPGFGVWSWSIGSSVSLC
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaacatgagagccagaccaaagctcagagcccagagcagcagcactcaccacactctgct
ggacctggacctggacctggacctggacctgtgttcatgaagagcgactggtcaatggat
catgatggttatttcaaacaaagttttggaagtttcaggatccagcagcagagaccagac
tctcctgaatccagctgtctgtctttaaagagcgacaactcaaagggctttttcattgac
tttaaagggcgacgtccatcagctgatcagatagtggaccaggagagctcagaggttccc
agtggtcagtctgcccagcagcatcaaacacacctggactccatatttatgctgctggag
gagaacatcgtcacttttgtgaagaacgagctgaagaagatgcagaaggttctgagtcta
gattacccagaatgcttagagagtcagagggaggatgaggaggtgttggatagtgatgat
gaagagcagaggaggagcagcagagaggagtttctgaagatcacactgaacttcctgagg
agaatgaagcaggaggagctggctgactgtctgcagagcagacattttgctccagtttgt
cgacgtaaacttaaatctaacctgaagaagaagttccagtgtttgtttgaggggatctct
aaagcaggaaacccaacccttctgaatcagatctacacagagctctacatcacagaggga
gggactggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaa
ccagacagaccagaaacaaccatcagacaagaagacatctttaaagcctcacctggaaga
gatgaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtctta
acacagaagttgactctggactgggctgaagacaaagccaaccaggacatacacttcaca
tttccattcactttcagagagctgaatgtgctgaaagagaaaaagttgagcttggtggaa
cttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttc
caggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaac
actgagatcctgactgatgttacagagtccacctcagtggacgtgctgctgacaaacctc
atcagggggaaactgcttccctctgcttgcctctggataaccacacgacctgcagcagcc
aatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcactgaccca
cagaaggaggagtacttcaggaagaggttcagagatgaggatcaggccagcaggatcatc
tcccacatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttctgctgg
atcactgctacagttctggaggatgtgttgaaaaccagagagggaggagagctgcccaag
accctgactgagatgtacatccacttcctggtggttcagaccaaactgaagaccatcaag
tatgatggaggatctgggacagatccacactggaataaaaagagcaggaagatgattaaa
actctgggaaaactggctgttgagcagctgcagaaaggaaacctgatcttctatgaatca
gacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcaca
cagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctg
agtgttcaggagtttctggctgctcttcatgtccatctgaccttcatcaagtctggagtc
aatctgctgttagaagaacaaacaaccaccaggtggtctaaactgttcagaaacaaacct
gaaccaacacagttctaccagagaactgtggacaaggccttacagagtccaaatggacac
ctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagactctccta
cgaggtctgctgacacagacaggaagtggttcatggacgaatcaggaaacagtccagtac
atcaagaagaagattgaagagactccctctgcagagaaaagcatcaacctgttccactgt
ctgaatgaactgaatgatcgttctctagtggaggagatccaacagtccctgagttcagga
cgtctctccacagataaactgtctcctgctcaatggtcagctctggtcttcatcttactg
tcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgcttcagaggaggct
cttctgaggctgctgccagtggtcaaagcctctaacaaagctctactgagtggctgtaac
ctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctg
agagatctggacctgagtaacaacaacctgcaggattcaggagtgaagatgttgtctgtt
ggactggagagtccacactgttcactggagactctcagactgagtgactgtaacctctca
gagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagat
ctggacctgagtaacaacaacctgcaggattcaggagtgaagatgttgtctgttggactg
gagagtccacactgttcactggagactctcagactgagtggctgtaacctctcagagaga
agctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagacctggac
ctgagtaacaacaacctgcaggattcaggagtgaagatgttgtctgctggactggagagt
ccacactgttcactggagactctcagcttggatcaaaccagactgacagagaaaagctgt
caggagatatcatcagttctcagctcccagtcctctagtctgagagatctggacctgagt
aacaacaacctgcaggattcaggagtgaagatgttgtctgttggactggagagtccacac
tgttcactggagactctcaggttgaatcaaaccagtctgacagagaaaagctgtcaggag
atatcatcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaac
aacctgcaggattcaggagtaaagatgttgtctgttggactggagagttcacactgttca
ctggagactctcagcctgtcaggctgtctgatctcagaggaaggctgtgcttctctggtc
tcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatcca
ggagactcaggagtgaagctgctgtctgctggactgaaggatccaggctggagactggac
actctcagggtggagcctggtggagtccgatggttgacaccaggtctgaggaagtattcc
tgtcaactcacaatcgacacaaacacagtgaacagattcctcaaactgtctgacaacaac
aggaaggtgacacttgtggaggaggatcagtcatatcctgatcatccagacagatttgat
ccttgtcctcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcgag
tggagaggagatgtttatatctcagtgagttacagaggaatcagaaggaaaggaggcaga
gactgtttgtttggactgaacgatcagtcctggagactgaggtgttctgatgttagtggt
tactctgtctgtcacaataacagaggaacatacatctcctcctcctcctcctcctcctcc
tcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggctctctg
tccttctacagagtctcctctgactctctgatccacctccacaccttcaacaccacattc
actcaacctctgtatcctgggtttggagtctggtcctggtccattggttcctcagtgtct
ctgtgttga
DBGET
integrated database retrieval system
