Lates calcarifer (barramundi perch): 108892340
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Entry
108892340 CDS
T04895
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108892340
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108892340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
LRR_8
DUF4329
Motif
Other DBs
NCBI-GeneID:
108892340
NCBI-ProteinID:
XP_050923918
UniProt:
A0AAJ8B267
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MNQSEDREEGVPPSKTTLCGEHESQTKAQSPEQQHSPHSAGPGPGPGPGPSCVSMKSDWS
MDPPLGFRQSVDGSFRIQQQRPDSPEPSCLSLKSDDSKGWDINFKGRRPSADQIVDQESS
EVPSGQSAQQHQTHLDSIFMLLEENIVTFVKNELKKMQKVLSLDYPECLRRQAEDEEVLD
SEDEEQRRSSREEFLKITLNFLRRMKQEELADCLQSKHVAPVCRRKLKSNLKKKFQCLFE
GISKAGNPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPDRPETTIRQEDIFKAS
PGRDEPIRTVMTKGVAGIGKTVLTQKLTLDWAEDKANQDIHFTFPFTFRELNVLKEKKLS
LVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLL
TNLIRGKLLPSACLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEDQAS
RIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQTKLK
TIKYDGGSGTDPHWIPKSRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSG
VFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLSEEQPTSLRSELIR
DKPEPTLFYQSAVDKALQSPNGHLDLFLRFLLGLSLQTSQTLLRGLLTRTGSGSETNQET
VQYIKKKIEETPSAEKSINLFHCLNELNDRSLVEEIQQSLRSGRLSTDKLSPAQWSALVF
ILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSDCNLSERSCEALSSVLSSQC
SSLRDLDLSNNNLQDSGVKMLSAGLESPHCSLESLRLNQTSLTEKSCQEISSALSSQSSS
LRDLDLSNNNLQDSGVKMLSVGLESPHCSLETLRLSGCNLSERSCEALSSVLSSQSSSLR
DLDLSNNNLQDSGVKMLSVGLESPHCSLETLSLSGCLITEEGCSSLVSALRSNPSHLREL
DLSYNHPGDSGVKLLSAGLKDPGWRLDTLRVEPGGVRWLTPGPWRYSCQLTIDTNTVNRF
LKLSDNNRKVTHVEEDQSYPDHPDRFDQCPQLLCRTGLTGRCYWEVEWRGEVHISVSYRG
IRRKGDSEDCLFGWNDQSWTLYCSDDGFSVWHNKRGTPISSSSSSSSSSSSSSSSVSNRV
AVYVDCPAGSLSFYRVSSDKLIHLHTFNTTFTQPLYPGFWFWSCGSSVSLC
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaacatgagagccagaccaaagctcagagcccagagcagcagcactcaccacactctgct
ggacctggacctggacctggacctggacccagctgtgtgtccatgaagagcgactggtca
atggatcctcctcttggattcagacaatctgttgatggaagtttcaggatccagcagcag
agaccagactctcctgaacccagctgtctgtctttaaagagcgacgactcaaagggctgg
gacattaactttaaagggcgacgtccatcagctgatcagatagtggaccaggagagctca
gaggttcccagtggtcagtctgcccagcagcatcaaacacacctggactccatatttatg
ctgctggaggagaacatcgtcacttttgtgaagaacgagctgaagaagatgcagaaggtt
ctgagtctagattacccagaatgcttacggaggcaagcagaggatgaggaggtgttggac
agtgaggatgaagagcagaggaggagcagcagagaggagtttctgaagatcacactgaac
ttcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcaaacatgttgct
ccagtttgtcgacgtaaacttaaatctaacctgaagaagaagttccagtgtttgtttgag
gggatctctaaagcaggaaacccaacccttctgaatcagatctacacagagctctacatc
acagagggagggactggagaggtcaatgatgaacatgaggtcagacagattgaaacagca
tccaggaaaccagacagaccagaaacaaccatcagacaagaagacatctttaaagcctca
cctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaa
acagtcttaacacagaagttgactctggactgggctgaagacaaagccaaccaggacata
cacttcacatttccattcactttcagagagctgaatgtgctgaaagagaaaaagttgagc
ttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggttt
gaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggac
ttccacaacactgagatcctgactgatgttacagagtccacctcagtggacgtgctgctg
acaaacctcatcagggggaaactgcttccctctgcttgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttc
actgacccacagaaggaggagtacttcaggaagaggttcagagatgaggatcaggccagc
aggatcatctcccacatcaagacctcacgaagcctccacatcatgtgccacatcccagtc
ttctgctggatcactgctacagttctggaggatgtgttgaaaaccagagagggaggagag
ctgcccaagaccctgactgagatgtacatccacttcctggtggttcagaccaaactgaag
accatcaagtatgatggaggatctgggacagatccacactggattccaaagagcaggaag
atgattgagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttc
tatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcagga
gtgttcacacagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttc
gtccatctgagtgttcaggagtttctggctgctcttcatgtccatctgaccttcatcaag
tctggagtcaatctgctgtcagaagaacaaccaacctccctgaggtctgaactgattaga
gataaacctgaaccaacacttttctaccagagtgctgtggacaaggccttacagagtcca
aatggacacctggacttgttcctccgcttcctcctgggtctttcactacagaccagtcag
actctcctacgaggtctgctgacaaggacaggaagtggttcagagaccaatcaggaaaca
gtccagtacatcaagaagaagattgaagagactccctctgcagagaaaagcatcaacctg
ttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacagtccctg
agatcaggacgtctctccacagataaactgtctcctgctcaatggtcagctctggtcttc
atcttactgtcatcagaaaaagatctggatgtgtttgacctgaagaaatactctgcttca
gaggaggctcttctgaggctgctgccagtggtcaaagcctctaacaaagctctactgagt
gactgtaacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtgc
tctagtctgagagatctggacctgagtaacaacaacctgcaggattcaggagtgaagatg
ttgtctgctggactggagagtccacactgttcactggagtctctcaggttgaatcaaacc
agtctgacagagaaaagctgtcaggagatatcatcagctctcagctcccagtcctctagt
ctgagagatctggacctgagtaacaacaacctgcaggattcaggagtgaagatgttgtct
gttggactggagagtccacactgttcactggagactctcagactgagtggctgtaacctc
tcagagagaagctgtgaagctctgtcatcagttctcagctcccagtcctctagtctgaga
gacctggacctgagtaacaacaacctgcaggattcaggagtgaagatgttgtctgttgga
ctggagagtccacactgttcactggagactctcagcctgtcaggctgtctgatcacagag
gaaggctgttcttctctggtctcagctctgagatccaacccctcccatctgagagagctg
gacctgagctacaatcatccaggagactcaggagtgaagctgctgtctgctggactgaag
gatccaggctggagactggacactctcagggtggagcctggtggagtccgatggttgaca
ccaggtccatggaggtattcctgtcaactcacaatcgacacaaacacagtgaacagattc
ctcaaactgtctgacaacaacaggaaggtgacacatgtggaggaggatcagtcatatcct
gatcatccagacagatttgatcagtgtcctcagctgctgtgtagaactggtctgactggt
cgctgttactgggaggtggagtggagaggagaagttcatatctcagtgagttacagagga
atcagaaggaaaggagacagtgaagactgtttgtttggatggaacgatcagtcctggact
ctgtactgttctgatgatggtttctctgtctggcacaataagagaggaacacctatctcc
tcctcctcctcctcctcctcctcctcctcctcctcctcctcctctgtctctaacagagta
gcagtgtatgtggactgtcctgctggctctctgtccttctacagagtctcctctgacaaa
ctgatccacctccacaccttcaacaccacattcactcaacctctgtatcctgggttttgg
ttctggtcctgtggttcctcagtgtctctgtgttga
DBGET
integrated database retrieval system
