Lates calcarifer (barramundi perch): 108892400
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Entry
108892400 CDS
T04895
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108892400
Cell adhesion molecules [BR:
lcf04515
]
Cadherins
Cadherin related
108892400
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GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
108892400
NCBI-ProteinID:
XP_018545431
UniProt:
A0A4W6DFF3
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Position
LG18:complement(34697..42357)
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AA seq
618 aa
AA seq
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MLRPCRLLLWQVVLRLSYHVVTASLCLGGSDIFASVKENSPTGQFISNISISGDAGANAV
KLCLTGGNAGWFYLEGRTIRLNTSVSRVLDREVQGSVLIAELTCYEDDVMQSQFRILVEI
LNENDNRPNFLQDMVQSFTITELTAVNSVVFTVKAVDADGDMITYIIDQSSPDAWFFRID
LPNSGNIVLNKPLDYETRPHLELIIWAQESHTKEKFNTSAVLTVNIEDGDDQYPHFLPCT
PVSPSVPVCMSPTYTTNITHKHQDVVLEFSPGPIRAEDGDRGINAPLIYSILSGDDRGRF
VINNSTGEFRLTRAVDDRRITPNFTLNVMVCQVDDRLKYSLASVVVRVLYENMFPPVFNR
TTFKGFIIQSSSPASIVSTYGNQVLQVQVSDHDFSDGLNPNIHYSLHPPSGLYQVTQRGV
LIARTDQLHAFDRHILQVMARDEESGEEVSASVDIEVLQRGQAVPSGAFTEQHMFGEVDG
RVAGGIAAMILMMFLSALAFLLLRTMKRQRLQRDPEEHAAVALEKCPNVVNPSRPVFSLD
DSLYNNQAFSHHYESSLQSDSLHGRQGVYTRKLSLLHPPSSSSSTIIITDPTDRSRPALH
LLSSSSHTLSDQTLEESD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaccctgcagactgctgctgtggcaggtggttctcagattatcttatcatgtt
gttacagccagtctgtgtctgggggggtcggacatctttgcgtcagtcaaagaaaacagt
ccgacaggtcagttcatctctaacatcagcatcagcggagatgcaggagcaaatgctgtc
aaactgtgtctgaccggaggaaacgccggctggttctacttagagggtcgaaccatcaga
ctcaacacgtcagtgtccagagttctggacagagaggtgcagggatcggtgctgatagca
gagctcacttgttatgaggatgatgtcatgcagagtcagttcaggatcctggtggagatc
ctgaatgaaaacgacaacagaccaaacttcctgcaggacatggttcagtcgttcaccatc
accgagctgacagcagtcaactctgtggttttcactgtgaaggcagtcgacgcagacgga
gacatgatcacttacattattgatcaatcatcgcctgatgcctggttcttcaggattgat
ttaccaaacagtggaaacatagtcctgaacaaacctctggattatgagaccagacctcac
ctggagctcatcatctgggctcaggaatcacacaccaaggagaagttcaacacgtcggct
gttttaactgtgaacatagaggacggagatgaccagtatcctcacttcctgccctgtaca
cctgtctctccaagtgttcctgtctgcatgagccccacctacaccaccaacatcacacac
aaacaccaggatgttgttctggagttttctcctggaccaatcagagccgaggacggagac
agaggaatcaacgctcctctgatctacagcatcctgtcaggtgatgatcggggcaggttt
gtgatcaacaacagtacaggtgagttcaggttaacccgagctgtggacgaccgacgaata
acaccgaacttcacactcaacgtcatggtgtgtcaggtggatgacaggctgaagtacagc
ttggcatcggtcgtggtcagagttctctatgagaacatgttccctccggttttcaacaga
accacctttaaaggtttcatcatccagagctctagtcctgcctccatcgtctccacctac
gggaaccaggtgttacaggtccaggtgtcagaccacgacttctctgatggcctgaatcca
aacatccactactccctccatcctccatcaggactgtaccaagtcacccagaggggggtt
ctgattgccaggacagaccaactgcatgccttcgacagacacatactacaggtcatggcc
agagatgaagagtcaggagaagaagtttcagcttcagtggacattgaagtcctgcagaga
ggacaagcagtccctagtggtgcgttcactgaacagcatatgtttggagaagtggacggc
agagtggcaggaggaatagcagcaatgatcctgatgatgtttctatcagctcttgcgttt
ctgctgcttcgaacaatgaagagacaacgtttacaaagagaccctgaagaacatgcagct
gtcgctctggaaaaatgtccaaatgtggtgaaccccagtcgacctgttttctctctggat
gactctttgtacaacaaccaagctttcagccatcactatgagtcttctttgcagtctgac
agtttacacggccgacagggagtttacaccaggaaactgtctctgcttcatcctccatca
tcatcatcatccaccatcatcatcactgatcctacagacagatccagaccagctcttcat
cttctatcatcatcatcacacaccctgagtgatcagacgctagaggagtcagactga
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