KEGG   Lates calcarifer (barramundi perch): 108892407
Entry
108892407         CDS       T04895                                 
Name
(RefSeq) transportin-3
  KO
K15436  transportin-3
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03013  Nucleocytoplasmic transport
lcf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108892407
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108892407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lcf03016]
    108892407
Transfer RNA biogenesis [BR:lcf03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    108892407
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N KAP122_middle TOR1L1_N Importin_rep_3
Other DBs
NCBI-GeneID: 108892407
NCBI-ProteinID: XP_018545444
LinkDB
Position
LG18:15735..26219
AA seq 923 aa
MEGGKPSLALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNNDISSMPFLVEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLTSCVEKTGNDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDETSTN
LHEAASDCVCSALYAIENVDTNMALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAA
LHTIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLSEVLQQVVLLPESVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVLALKKLLAEES
TNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSDTLNTHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHIIQCA
IAATSLDHRDANCSVMKFVRDLIHTGVANDHEEDFEVRKQLIGQAMEQHGQQLVTQLMHS
CCFCLPPYTLPDVAEVLWEVMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLFR
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggaggggggcaaaccgagcctggccctggtctaccaggcggtccaagccctgtaccac
gacccggacccggccgggaaggagcgagcctcggtgtggctgggagagctccagagatcg
atgtatgcatgggagatctcagatcagctgctgcagctcaaacaggatgtggagtcatgt
tattttgctgctcagaccatgaagatgaagatccaaacctctttctacgagctcccacca
gagacgcacaatgcactgcgagactccctgctgacccacatccagaacctcaaagacctg
tcccccatcattgtcacacagctggcgttagccatcgcagatctcgcccttcagatggcc
tcgtggaaaggatgcgttcacacgctcatagaaaagtacaacaatgacatcagctcgatg
cccttcctggtggagatcctcactgtgctgccggaggaagttcacagtagatctcttcga
atcggagccaatcggaggacggagatcatcgaggatcttgcgtattactccagcactgtg
gtcactctgttgacatcgtgtgtggagaagacagggaacgacgagaagatgctcatcaaa
gtgtttcgttgtctgggcagctggttcaacctaggagtcctggacagtaacttcatggcc
agtaaccagctgctcatggtcctcttccaagtcctgcagagggatgaaacctccaccaac
ctccacgaagcggcatcagactgcgtctgctcagctctctacgccattgaaaatgtggac
actaacatggcgttagctctgcagctcttccagggtgtcctgacgctagagacggcctat
cacatggcagtcgcccgagaagacctcgacaaagtgctgaactactgcaggatcttcacc
gaactctgtgagacctttttagaaacgacagtcaggagtccaggtcaaggtatgggcgac
ctgaggacactggagctgctgctgatctgtgcaggacaccctcagtacgaggtggtggag
atctcctttaacttctggtaccgtctcggagaacatctgtataaaataaatgatgcagct
cttcacaccatcttcagaccgtacatccagagactcctgcactgtttggctcgacactgt
cagcttgatccagaccacgaaggaatcccagaggacacagatgattttggagagttcagg
atgagagtctctgacctggttaaagacgtcatctttcttgttggatccatggagtgtttc
tctcagttatattctacgttaaaagaggggaaccctccctgggaggtgacggaggccgtt
ctcttcatcatggctgcaattgcaaagagtgttgatccagagaacaacccaacactgtct
gaggtgttgcagcaggtggttttactcccggaaagcgtccacatggcggttcgatatacg
agcatcgaactggtcggggagatgagcgaggtcgtggacagaaacccgagattcctcgac
ccggtgttgaactacctgatgaaaggcctcagagagaaacctctggcgtcggcagcggcg
aaggcaatccacaacatctgttcagtctgcagagatcacatggctcaacacttccagggt
ctgttggacatcgctcgctctctcgactcgttcgccctgtccacagaggctgccgtgggt
ctgctcaaaggtacagctctggtcctggctcgtcttcctctggagaagattgcagaatgt
ctcagtgatctctgtgctgttcaagtcctggctctgaaaaagcttttggcagaagaatca
acgaatggtaaatcagctgatcccaccgtctggctcgacagactggctgttatcttcaga
cacacaaaccccattgtagagaacggacagactcacccctgtcagaaagtcatccaggag
atctggcccgtgttgtcggacactctgaacactcatcaggctgataacaggatcgtggag
cgatgctgtcgctgtctcaggttcgctgtgcgatgtgtcgggaaaggctccgcctccttg
ctgcagccactcgtcactcagatggtgagtgtgtaccaggtgtatccgcactcctgcttc
ctgtacctgggcagcatcctggtggatgagtacggtatggaggagggctgcaggcaggga
ctgctcgacatgttacaggctctgtgcatgccgaccttccagctgctggagcagcccaac
ggtttgaggaatcatcccgacactgtggacgacctgttcagactggccaccaggtttgtg
cagaggagtcctgtcactttactcagcagcagcatcatcgttcacatcatccagtgtgcg
attgccgccacctcactggaccaccgagacgccaactgcagtgtcatgaagtttgtccga
gacctcatccacactggagttgccaacgaccatgaggaagactttgaggtgaggaagcag
ctgattggtcaagccatggagcagcatggccagcagcttgtcactcagctcatgcactcc
tgttgtttttgtttgccgccgtacacgctgcctgacgtcgctgaggtgctgtgggaggtc
atggtgttcgacagacctactttctgtcgctggttagaaaacgctctgaaaggtttacca
aaggagacgtcaggaggagccgtgaccgtcactcacaaacagctgactgacttccacaaa
caggtcactagtgctgaggagtgtaaacaagtatgttgggccatcagagagttcaccaga
ctattccgatag

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