Lates calcarifer (barramundi perch): 108892471
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Entry
108892471 CDS
T04895
Name
(RefSeq) syncoilin isoform X1
KO
K10377
syncoilin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108892471
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
108892471
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Gene cluster
GFIT
Motif
Pfam:
Filament
SOGA
zf-C2H2_ZNF462
Motif
Other DBs
NCBI-GeneID:
108892471
NCBI-ProteinID:
XP_018545549
UniProt:
A0AAJ7VBT9
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Position
LG19:9229210..9232483
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AA seq
432 aa
AA seq
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MWASQPSALTQFVIPCGGDLDRVSPVPPVILINTKCAYVFLETDTLSLKLKANSVHSCLH
IYLDHRLRAKLLPSAHMDNQGSTEDGKDMASTEDSPMELRFVGEITENSHSDSETETIIP
QDEQTQHPTVQTDQAVMDNLGLLFERCIQQVSRLEEQRDELIQELLRLQEPMLRVVEHLR
GKVAAMQRLLTLAQLDYMAVYGEVQQVKRKLFATAKDCIQSQVTLAAHEYEVAQSAVTQE
ELKAHIQTLTQELSQLQEAQKNQLNSLRDQASKPCRPRAMSDVSQCRQASVRLQRRLSGS
VKALEGWYEPRLMALLRRRQIGEDALRKSREQAMDLKARLGPLREDIQRMEVQRSCLEQR
ISLMEREREESITRHKETVEKLKETLREVEVEFEVQRKSKEDLEQLKDGLLTELTFLRGG
DEASETTAQEEP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctagccagccctcagcactgacacagtttgtgatcccttgtgggggagactta
gatagagtttcccctgtgcctccggtgatattaataaacacaaagtgtgcctatgttttc
ctggagacagacacactgtccttaaagctaaaagcgaactctgtccatagctgtctgcac
atctatctggaccatcgcctccgagcaaaattacttcctagtgcccacatggacaatcaa
ggatcaacagaggatggaaaagacatggcatctactgaggactcgcccatggaacttaga
tttgttggagagatcacagaaaacagccacagcgactctgaaacagagacaatcattccc
caagatgagcagacacaacaccccacagtgcaaaccgaccaggcggtcatggacaacttg
gggcttctcttcgaacgctgcatccagcaagtgtcccgtctggaggagcagagggacgag
ctgatacaggagctcctccgcctgcaggagcccatgctgcgagttgtggagcacctgagg
gggaaggtggcggcgatgcagaggctgctcactctggctcagctggattacatggctgtt
tatggggaagtgcagcaggtgaagaggaaactgtttgccacagccaaagactgcatccag
agccaggtgacgctggctgcacacgagtacgaggtggctcagtctgcagttacacaggag
gagctcaaggcccacatccaaactctgactcaggagctatcccagctccaggaggcccag
aaaaaccagctgaactctctgagggaccaggcctctaagccctgcaggcccagggccatg
agcgacgtcagccagtgccggcaggcgtccgtcagactgcagcggcggctcagcggcagt
gtgaaggcactggagggctggtatgagcctcggctcatggctctgctgaggaggaggcag
atcggggaggacgctttgagaaagagcagggagcaggcgatggacctgaaggccagattg
gggcccctgagagaggacatacagagaatggaggtgcagaggtcctgtctggagcagagg
atctctctgatggagagggagagggaggagagcatcacacgacacaaggagactgtggag
aaattaaaagagactctgagagaagtagaagtggagtttgaggttcaaagaaaatccaag
gaagatttggagcagcttaaagatggccttttaacagagctgacatttctgagaggaggt
gatgaagccagtgaaaccactgcacaggaagagccctga
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