Lates calcarifer (barramundi perch): 108892472
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Entry
108892472 CDS
T04895
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
lcf03083
Polycomb repressive complex
lcf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108892472
03083 Polycomb repressive complex
108892472
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108892472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108892472
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108892472
Histone modification proteins
HAT complexes
HATB complex
108892472
HDAC complexes
Sin3A-HDAC complex
108892472
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108892472
PRC2.2
108892472
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108892472
Heterochromatin formation proteins
Other heterochromatin formation proteins
108892472
Chromatin remodeling factors
NuRD complex
108892472
NuRF complex
108892472
NuRF complex (fruit fly)
108892472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108892472
NCBI-ProteinID:
XP_018545553
UniProt:
A0AAJ7VBU7
LinkDB
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Position
LG19:complement(9231963..9236182)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagacgctgcatttgacgatgcggtggaggaaagggtgatcaatgaggag
tacaagatatggaagaagaacaccccttttctctatgacctggttatgactcacgccctg
gagtggcctagtctcactgcccagtggctgccagatgtcaccaggccagagggtaaggac
tacagtgtgcacagactggttctgggaacgcacacctctgatgagcagaatcaccttgtg
attgccagtgttcagctcccaaacgacgatgcccagtttgatgcctcacactacgacagt
gagaaaggagagtttggtggttttggatctgtaagtggtaagatagagattgagatcaag
atcaaccatgagggagaggtgaacagagcccgctacatgcctcagaatccttgcatcatt
gccaccaagacccccactagtgatgtgctggtctttgattacacaaagcacccctccaaa
cctgacccttcaggtgagtgcaccccagatctgcgcctgagaggccaccagaaggagggc
tacggcctgtcctggaacccaaacctcagtggctgtctcctcagtgcttctgatgaccat
accatctgcctgtgggacatcagcacagtgcccaaggaggggaagattgtggatgccaag
accatcttcacaggccacactgctgtggtggaggatgtctcctggcatttgctacacgag
tctctctttggatctgtggccgacgaccagaaactcatgatctgggatacacggtccaac
aacacctccaagcccagccatgcagtggacgcccacactgctgaggtcaactgcctgtcc
ttcaatccctacagtgagttcatcctggccactggctctgcagataagactgtggctctt
tgggatctgaggaacctgaagctgaagctgcactcgtttgagtctcacaaagacgagatc
ttccaggttcagtggtctcctcataacgaaaccatcctggcctccagcggcacagataga
aggctcaatgtgtgggacctcagtaagatcggagaggagcagtctcctgaggatgctgag
gatggccctccagagctgctgttcatccatggaggacacacagctaagatctcagacttc
tcttggaaccccaacgagccgtgggtcatctgttctgtatcagaggacaacatcatgcaa
gtgtggcagatggctgaaaacatctacaacgacgaggacccagaaggtgctgcagattca
gaggtccaggcatga
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