Lates calcarifer (barramundi perch): 108892473
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Entry
108892473 CDS
T04895
Symbol
khdrbs1a
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1a
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108892473 (khdrbs1a)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108892473 (khdrbs1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
Sam68-YY
KH_1
STAR_dimer
KH_5
Motif
Other DBs
NCBI-GeneID:
108892473
NCBI-ProteinID:
XP_018545554
UniProt:
A0A4W6D6N6
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Position
LG19:9240041..9244172
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AA seq
400 aa
AA seq
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MSQANANESKSESAIESSPAQKKIKMEDTKYLPELLAEKDSLDSSFTHAMKLISAEIERI
QKGETKKEPEKETYLDLFATKNLKLKERVLIPTKQYPRVNFVGKLLGPQGSTIKRLQEDT
GAKISVLGKGSMRDKNKEEELRKGGEAKYAHLAMELHVFIEVTAPIPEAYLRMAHAMEEV
KKFLIPEPGEHDPYMDPHFLNGSQDGSGRGRGGHLGRGRGGPPGAGGPRGRGMPRGGPRG
AMRGGAPRGGLGRGNAPRGAPSGRGGPPSAPNRGGSAPRSRPPAAGAPRMLPSAAMSHQQ
HQVPPSASQPKADAYEDYPPYEESYAEPAYEGYDSYYSQQSAPADTEYYDYGHGEAQDSS
YEPYAQDDWDNSWSNSGAGGKAPPSRQSKGTYREHPYGRY
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcgaatgctaatgagagcaaatctgagtccgccatagagtcaagcccagca
cagaagaaaatcaaaatggaagacacaaagtacctcccggagctcctggctgagaaagac
agcttggattcatcgttcacgcacgccatgaaactcatctctgcagagattgagaggatc
cagaaaggtgaaacaaagaaagagccagaaaaggaaacatatctggacctgttcgctacc
aagaatctcaaactcaaagagcgagtcctcattcccaccaagcagtaccctagggttaac
tttgtcggtaagcttttgggaccccagggtagcacaatcaaaaggctccaggaggatact
ggtgcaaagatttcagttcttggcaaaggttccatgagggacaagaataaggaggaagag
ctgaggaagggtggtgaggctaaatatgctcacttggccatggagttgcatgtgttcatt
gaggtgactgcacccatcccagaagcctatctgcgaatggcacatgccatggaggaggtc
aagaagttcctcatcccagaacctggtgagcatgacccatacatggatcctcacttcttg
aatggatcccaggatggttcaggcagggggcgaggtggccacttaggaaggggcagaggt
ggaccacctggtgctggaggaccaagggggcgaggaatgccacgtgggggccctcgaggg
gcaatgcgtggtggagctccacggggaggactaggacggggaaacgctcccagaggtgcg
ccatctggtaggggtggtccaccctctgctcctaatagaggaggctcagctccccgctct
agaccacctgcagctggggcaccaagaatgcttccctctgcagccatgtcccaccagcaa
caccaagttcctccttcagcatcacagcccaaagctgatgcctatgaggactatcctcca
tatgaagaatcctatgcagaacctgcctatgaaggatatgatagttattatagtcagcag
tctgcacctgcggatactgaatattacgattacggacacggggaagcccaggattcatca
tatgagccttatgctcaagatgactgggacaactcatggtccaactccggggccggaggc
aaagcccccccatccaggcagtcgaagggaacgtatagagagcacccatatggaagatac
tga
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