Lates calcarifer (barramundi perch): 108892483
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Entry
108892483 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108892483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108892483
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108892483
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
108892483
NCBI-ProteinID:
XP_018545566
UniProt:
A0AAJ7VBQ3
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Position
LG19:complement(10816573..10823782)
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AA seq
1181 aa
AA seq
DB search
MIKCLPKEVQGKLRSGVAIPSLQQCLEELILNSIDAEATCVGVRMDMEALKVQVIDNGAG
MSAEDIERVGNRYYTSKCNSLEDLDDLKWYGFRGEALASIVSLATLVEISSRTRSTVKTH
VKIFKNGKGLDVFEAETARPSAGTTVVICNFFHNMPVRRKRMDAVLEGERIRHRVEAISL
MHPSVSFTLKNDCTGAMMVQLPKAKNTYHRFVQIHSLVRAQKLREISYTHGQFEVTGYIG
REGHYNNSLQFLYVNARLLLKTRIHKLLNFLLRRLSSSNQKCDSPDGQSAIRSPKHKRSQ
ELHGVYIINIKCPYSEYDICLEPAKTLIEFKDWDGILLCIEEAVKAFLSRENLVAVLSQD
DLDYVSPQLFSTDSTDQEGNSSGKGGQAASSASTLDCSIGMKLASESVHRKRKDDCVSED
RVCQESDLMECKGDEAEKMPADDLEKIQSEGKECRDEPQCQLEPASDDNITEEEEPTFSK
AEEGSQIMCISRPVRQLKSEEPQLSKGRHETRLNNASSASDVILPDSITQQIQPDLNCIE
QLLPDHVGAGGHKQTLMSNRKICLSDPFIHQSLQTQDVSQINRSVFQKQNLAQKGKERSL
VSKYKISLNADCDIPSKISRIESCQRLSLCKESGSLDKFRRAFGQSNEVKLPSLETNLQN
NTRLPQNPQNYLVCQKDQQDGDVTQTQKNETPSQSPPALSVFTKLKPVSAQSKGKKSLAA
KLCHLKQHKSEGSKASQDNTCLSSGDDIQDSNNNENLCDTALNPELVSGCNTNPQSGEKE
EDAGDWLHHYDTSVGKTVYVNRVTGLSKYEDPSTEDTQVRCSSDVTNMAVSVVSETGMEH
RCYPFQVDVVLPFLPKSRTGRVISSGLGDRDGGGESSNSLSSLYSKWNNPVFVQPPMVGV
DISSGQADGLAVKIHNILFPYRFSKAMIHSMKVIHQVDKKFLACLINTRDEEPAAHTETE
GNLLVLVDQHAAHERVRLENLVADSYEDDPDASGERRLCSSTILPPLEISVTEEELRLLR
SCETHLRILGLRMKFSQAADPQVFVGKVPLCFMEKESNELRRGRPSVIKPIVEEYLREQI
ELLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDTLSKDECHSLVASLSSCQLPFQCAHG
RPSIAPLVDVLHLDKDQKELQKPNLRKLRRMHKAWELYGNR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgcccaaagaggttcaggggaaacttcgctccggtgtcgccatcccg
tcccttcaacagtgtttggaggagctcatcctaaacagcatcgatgccgaggcgacctgt
gtgggggtcaggatggacatggaggcgttaaaagttcaggtaatcgacaacggcgctggg
atgagcgctgaagatattgagcgtgtgggaaacagatactacacaagcaaatgcaactct
cttgaagacctggacgacctcaagtggtacggttttagaggagaagccttggcgagtata
gtttctttagccacgcttgttgaaatctcgtcccgaaccagatcaacagttaaaacacac
gtgaagattttcaagaacggcaaaggcttggacgtcttcgaagcagagacggctcgaccc
tctgcggggacgactgttgtcatttgtaacttcttccacaacatgccagtccggaggaag
aggatggatgctgtgctggagggtgagaggatcagacacagggtcgaggctatttctctg
atgcatccttctgtgtctttcaccctgaagaatgactgcacaggagccatgatggtgcag
cttcccaaagccaaaaacacgtatcacaggtttgttcagatacacagtcttgtgcgagca
cagaaactgagagaaattagctacacacatgggcagtttgaggtgaccggttacattggc
agagagggccactacaacaacagtttacagtttctgtatgtaaatgccagactgctgctg
aaaacacgcatacacaagctgctgaactttctcctacgcagactgagcagttcaaatcag
aaatgtgacagtccagatgggcagtctgccattaggagtccaaagcacaaacgaagccaa
gagctgcatggagtatatatcatcaatatcaaatgtccttactcagaatatgacatttgt
cttgagcctgccaaaactctaatagagttcaaagattgggatggcattttgctctgcata
gaagaagcagtgaaagcttttctgagcagggagaacttggtggctgtgctttctcaggat
gacttggactatgtgtctcctcagctgtttagcactgacagtacagatcaagaggggaac
agcagtggcaaaggcggccaggcagctagcagtgcttccacgctagattgcagtattgga
atgaaactggcatctgaatctgttcatcgtaagcgcaaagatgactgtgtttctgaggac
agagtttgccaggagtctgatctgatggaatgtaaaggcgatgaggctgaaaagatgcct
gcagatgacttggagaagatacaaagtgaaggaaaagaatgtagagatgagcctcagtgt
caactggaacctgcatctgatgataacattactgaagaagaggagccaacattcagtaaa
gctgaggaaggctctcaaattatgtgcatatcaaggccagtcagacaattgaagagtgaa
gaaccacaactttctaaaggaagacacgagacacgattaaacaatgcctcctctgccagt
gatgtgattttaccagacagcatcactcaacaaattcagcctgatttaaactgcattgag
caattattacctgaccatgtgggtgcaggaggacacaaacagactttaatgagtaataga
aagatctgtctgtctgatccattcattcatcaaagtctgcagactcaggatgtttcccaa
atcaacaggtcagtgtttcagaagcaaaatttagcacagaaaggcaaggagagatccctt
gtgtcaaaatataaaatttcactgaatgcagactgtgacattccctcaaagatttccaga
attgaatcttgtcaaaggttgtctttatgtaaggagtctggatctcttgacaagtttaga
agagcatttggtcaatctaatgaagttaaattaccctctctggagactaatttacagaac
aacactaggctcccgcagaatccccagaattatttggtttgccagaaagatcagcaggat
ggtgatgttacacagacacaaaaaaatgagacaccgagccaaagcccaccagccctctct
gttttcaccaagctaaaaccagtttcagctcagagtaaaggcaagaaatctttggcggct
aaactctgccatttgaaacaacacaagtccgagggttcaaaagcctcacaggacaatacc
tgtctcagcagtggtgatgacatccaagacagcaacaacaatgagaatctctgtgacact
gcactgaatcctgagctggtctcaggttgcaatacaaaccctcagtcgggtgagaaagaa
gaggatgcaggtgactggcttcatcactatgatacatccgtgggaaagacggtttacgtc
aacagagtgaccgggcttagcaaatatgaggacccatctactgaagacacacaagtgcgc
tgttcatctgatgtcaccaatatggctgttagtgtcgtctctgaaacagggatggaacac
agatgttacccatttcaggtggatgttgtgttgcccttcctgcctaaatccaggacagga
agagtgattagttcagggcttggtgacagagatggtggtggtgagagctccaattcactt
tcctcactgtactcaaaatggaataaccctgtctttgtccaacctcctatggttggtgtg
gacatatcaagtgggcaagctgatggactggctgtaaagatccataacatcctgtttcca
taccgcttttctaaggccatgattcactcaatgaaggttattcatcaagtggataagaag
tttctcgcatgccttatcaatacaagagatgaagaacctgcagcacacactgaaactgaa
gggaatcttttggtgctggtggatcaacatgctgcacatgagagagttcgacttgaaaat
ctagttgcagattcctatgaggatgacccagatgcatcaggggaaagacgtttgtgttca
tcaaccattttgccacctcttgagatcagtgtaacggaggaggagctgaggctgctcagg
tcttgtgagacacatttacggatcttgggcttgcggatgaagttctcacaggcagcagat
ccccaagtatttgtggggaaggtaccactgtgcttcatggagaaggagagtaatgagcta
agacgggggagaccatctgttatcaagcccatagttgaggagtatcttcgagagcagatt
gagttactccgctcaactggtagagtgagaggaacgttacctctcactgtactaaaagtg
cttgcctctctagcgtgccacggtgccattaaattcaatgacaccttgagcaaagatgaa
tgccacagcctggtagcatccttatcttcctgccagctgcccttccagtgcgcccatggc
cgtccttccattgctcccctggtagacgtcctccatttggataaagaccagaaggaatta
cagaaacctaacctccgaaagctgagaagaatgcataaagcttgggaactttatggaaat
agataa
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