Lates calcarifer (barramundi perch): 108892509
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Entry
108892509 CDS
T04895
Name
(RefSeq) tubulin polyglutamylase TTLL5 isoform X1
KO
K16602
tubulin polyglutamylase TTLL5 [EC:
6.3.2.61
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108892509
04812 Cytoskeleton proteins [BR:
lcf04812
]
108892509
Enzymes [BR:
lcf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
108892509
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
108892509
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
108892509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
108892509
NCBI-ProteinID:
XP_050933951
UniProt:
A0A4W6EW65
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All DBs
Position
LG19:complement(10733777..10781183)
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AA seq
1310 aa
AA seq
DB search
MPAVIRDKEDSESSSEDEQEDHPCIAWSGLSKTIPVLLFFPEAVVSKDGNICSAGERYNM
AFKIVRTESRLVRGILTNHGFSEVHPNSNDFNLMWTGSHLKPYILRSLEDFQKVNHFPRS
YELTRKDRLYKNIQRMQQTHGFKNFHIVPQTFVLPSEYQEFCNCFAKDRGPWIIKPVASS
RGRGIYLVSNPNQISMDENILVSRYINNPLLIDEFKFDVRLYVLVTSYDPLIIYVYEEGL
ARFATVKYDRTSKNIKNTFMHLTNYSVNKKSSDYVSCDDPEVEDYGNKWSMSAVLRYLKQ
EGKDTTLLMRQVEDLIIKAVLSAEQQIATACKTYVPHKTNCFELYGFDVLIDSNLKPWLL
EVNLSPSLACDAPLDLKIKASMIADMFSLVGFVCQDPLSRHPRSDRVTLDPGLKLPAAPR
TQKPFSAPTAPRHSRMRQRPASASNPETEGSKEKQGAKQGQGDSTLSLTAEEIKVLRRIK
EEYERRGGFIRIFPTAETWELYGGYLESKTSMNYMLANRLFHGRNVNGNVQLQVDAVHGC
HVVQYERKLLSLEARKRRQRHLTHRSAAGKKKSGKGSKASPTESSSQEGEECAQEEREEA
KRLLEPVAHTALVAEQRKQVATPLERCHSEALSSSEAATHNARPRVNLLNILQQGWDLSK
VQARVAFSSYLQRVQQRLLAESRANTIPAWPDKDNDQMELVIRFLRRAASNLQQDIKVVL
PSRQLPLQDRRRILSHQLGEFIHCYNKETEHMVKKQADSKEEHCVNPSVFQEYITAASEN
DLEEVLTFYTQKNKSATVFLGTKVRSVKKDIHEINASGDSGNFENSKTLPVAKEDSSASE
SSLSTGKVSSDPDIKAAESQPSVRALSEEQQAAVGSGKTQPDVQASQHCSGFPATLDCTH
IHLQHCSPAPTSLPLHCPPPPPPQPPSYAQSLAKSQFCHSETLSDPPAYTSAPVVTQPPR
AMWTAVSTGSNTVATGQPTQVLRRNQSFTSSTSGSGAASSIPSATHIYSQKLSRPTSAGQ
VNRRGASSKLKSNSVGALKELNALSAQAQSNQQAFISALQKLADKQVARHYASSSHINLL
TQHLTNLNLANRMLSRESFTLNPKMRHTAASTQGPVKAIHSGADVLHSTGHRPLKEDEGL
WDGQMQNAYSLVTGVNPQQRYQPTQGSYQLQFAIQQLQQQKLQSRQFLDQSHYRHQAQFP
DQTSAPHTQASTNSSSCPPSSFHVRPTHSHSHGHIQTYVSPVLTPKPPSSAREGQIRKTA
TKRLIKQTSSESSASGTVSSGQHMVYEAICGKTGLSVYRKLFQDQEPSHR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgtgatccgggataaggaggactctgaatcctcctcagaagacgagcaagaa
gaccatccctgcatcgcgtggagcggccttagcaagacgatcccggtcctcttgtttttc
cctgaagctgttgtttcaaaagatgggaacatctgctcagctggagagcgatacaacatg
gccttcaagattgtgcgcacagagagccgtctggtacgaggaatactcaccaatcatgga
ttcagtgaggttcacccaaacagtaacgacttcaacctcatgtggacgggatctcacctc
aagccttacatactacgcagccttgaagacttccagaaggtcaaccactttcccaggtca
tatgaactgacgcgaaaagaccgtctctataaaaacatccagcgaatgcagcaaactcac
ggcttcaaaaacttccatatcgttcctcagacctttgtgcttccctctgagtaccaggaa
ttctgcaattgttttgccaaggacaggggcccatggatcattaaaccagtagcatcttca
agaggacgaggcatctacttggtcagcaatccaaatcagatttcaatggatgaaaacatc
ttggtgtctcgctatattaataacccactactgatagatgagttcaagtttgacgtgcgg
ctgtacgtgttggtaacatcatacgatccgctcatcatctatgtgtatgaggagggcctg
gcgaggtttgccacagtaaagtatgaccggacttcaaagaacattaagaacacattcatg
catctcaccaactacagtgtgaacaaaaaaagcagcgattatgtcagttgcgatgaccct
gaagttgaggattatgggaacaagtggagtatgagtgcagtgctgaggtatttgaagcag
gaggggaaggacaccacattgctgatgagacaggtggaggaccttatcatcaaagctgtt
ctgagtgctgagcagcagatagccaccgcctgcaagacgtatgttccccacaagacaaac
tgcttcgaactatatggttttgatgtgctcattgactccaacctcaaaccctggttgtta
gaggtgaacctttctccctccctggcctgtgatgcgcccttggatctgaagataaaggcc
agcatgattgcagacatgttttcgcttgtgggctttgtgtgtcaggaccccctgtccagg
catccacggtctgaccgagtcaccctggaccccggcctgaaactcccagcagccccaaga
acacagaaacctttttctgcaccgacagcccctagacacagcagaatgcgacagaggcct
gcatcagccagtaacccagaaacagaggggtcaaaagaaaagcaaggggctaaacaaggc
caaggagacagcactctgagcttgactgctgaggagatcaaagtgctgaggaggattaag
gaagaatatgaaagacgaggaggcttcattaggatctttcccactgcagagacatgggag
ctatatggtggatatctggagtccaagacatcaatgaactacatgctggcaaacagactt
ttccatggaaggaatgtgaatgggaatgtgcagctgcaggtggacgcggtccatggctgt
cacgttgtccagtatgagaggaagctgctgtctcttgaggcacgtaagcggagacagcgc
cacctgactcatcgctctgctgcagggaagaaaaaatcggggaagggatccaaggcctcc
ccgactgagagcagcagtcaggagggagaggagtgtgctcaggaggaaagagaggaggcg
aaacgacttctcgagccagtcgcacacactgctttggtagcagagcaaagaaaacaagtg
gccacaccactggagcgctgccacagtgaggctctgtccagctcagaggcagccacgcac
aatgccaggcccagagtcaacctgctcaacatccttcagcaggggtgggacctcagtaaa
gtgcaggcccgggtggccttttcctcgtacctgcagcgagtccagcaaagactgttagca
gagagcagagccaacaccatcccagcttggccagacaaggacaacgaccaaatggagctg
gtgattcgcttcctgagaagagcagccagtaaccttcagcaagacattaaggtggtcttg
cccagtcggcagttaccactccaagaccgcagacgcatcctgtcccaccagttaggggag
tttatccactgttacaacaaggagactgaacacatggtgaaaaaacaggcggatagcaaa
gaggagcattgtgtcaaccccagtgtatttcaggagtacatcactgcagcaagtgaaaac
gatctggaggaagtactgacattctacacacagaaaaataaatcagccaccgtcttccta
ggaacaaaagtcaggagtgttaaaaaagacattcatgaaataaatgcctcaggagattca
ggcaactttgagaattccaaaactctgcctgtggccaaagaggattccagcgcttcagag
tcctcgctctccacggggaaagtcagcagtgacccagacatcaaggccgctgagagtcaa
ccttctgtacgtgcactgtctgaagaacaacaggcagcagttggaagtggtaaaacccag
ccagatgtccaggcgtctcagcactgctctggctttcccgcaacgttagactgcacacac
attcatctacagcactgctcccctgctccgacatccctgcctcttcactgtccgcccccg
ccgcctcctcagccgccatcctacgcgcagtccttggcaaagtctcagttctgccattcg
gagactctttctgaccctcccgcatacacctctgcccctgtggtcacacaacctccaaga
gcaatgtggacagctgtttccactggctctaacacagtcgcaaccggacaaccaacccag
gttctgaggaggaaccagtcttttacctcatccacatccggctctggggcagcctcctcc
atcccaagtgccacgcacatctacagccagaagctctctagacccacgtctgcaggccaa
gttaacaggaggggcgcttccagtaagctgaagtcaaactcagtgggggcgttgaaggag
ttaaacgccctgtctgctcaggcccagtctaaccagcaggcctttatttcagccctgcaa
aagctggctgacaagcaggttgctcgccactatgccagctccagtcatatcaacctgcta
acacaacacctgaccaatctgaacctggccaacaggatgctgagcagagagagcttcaca
ttgaaccctaagatgcggcacactgctgcatcaacccaaggaccagtgaaagctattcac
tctggagcagatgtactccacagcactggccacaggccactgaaggaagacgagggtctt
tgggatgggcagatgcagaatgcctatagtttggtgactggggtgaacccccagcagcgc
taccagcccacccaagggagctaccagcttcagtttgctatccagcaactacaacagcag
aaacttcagtcccgacaattcctggaccaaagccattacagacaccaggctcaatttcca
gaccagacaagtgctccacacacccaggcttccacaaactcatccagctgtcctccatcc
agctttcatgttcggcccactcacagccacagccacggccacatccagacttatgttagt
cctgttctcaccccaaagccacccagcagtgctcgagagggacagatcaggaaaacagca
acaaaacgcctcatcaagcagacgtcctcagagagttcagccagtggaaccgtgtccagt
ggccagcatatggtctacgaagccatctgcggtaaaacaggtctctctgtgtaccgcaag
ctgttccaggaccaggagcccagtcacagatga
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