Lates calcarifer (barramundi perch): 108892519
Help
Entry
108892519 CDS
T04895
Name
(RefSeq) 5'-3' exonuclease PLD4
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00564
Glycerophospholipid metabolism
lcf00565
Ether lipid metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108892519
00565 Ether lipid metabolism
108892519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108892519
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
108892519
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108892519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
SACK1
Motif
Other DBs
NCBI-GeneID:
108892519
NCBI-ProteinID:
XP_018545633
UniProt:
A0A4W6DGL6
LinkDB
All DBs
Position
LG19:complement(9470574..9474479)
Genome browser
AA seq
483 aa
AA seq
DB search
MSSSYERLHDSYVSNKGRSTSCVALAVLLGCLIVLGVLLAIAVLKRPPPPKDHETLPQDN
SGGNSSTNQCSMALVESIPIQMKYKANVTLGIPLEQVWKDLIAMATDQVDVVSFYWTLTG
EDIKVNSSTDVPGRNILKELGELPSRNISVRVVTSVPSVRTNSTDLKILKQKGVHVREVN
FGRLTQGVLHSKFWIVDRKHVFIGSANMDWRALTQVKELGVVIYNCSSVAKDLHKIFQSY
WVMGQSNSTLPQPWPAKFETDINLDHPLLVEAENVSSSIYLSASPPSFCPPSRTQDLEAI
LSIISEAQHYVDVSVMEYFPTTRFERPLKYWPFIDDAIRMAAFERKIKFRMLISCGRDSD
PAMLPFLQSLASMDNPHDDISIQVKLYIVPVGNQTDIPYSRVNHNKYMVTDKVAYVGTSN
WSGDYFITTAGVGLVISQHAPQPEWKTKALQSQLRAVFDRDWYSEYAVNLTDLGHRPDCA
LST
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcatatgaacgccttcatgacagttatgtttcaaacaaagggaggtcgacc
agctgtgtggcattagctgtgcttctgggctgtctgattgtcctgggggttttgcttgcc
atcgctgttctgaagagacccccgccgcccaaagaccatgagacacttcctcaggacaac
agtggaggcaattcctctacaaatcagtgcagcatggccctcgtggagagcattcccata
cagatgaaatataaagccaatgtaacgctcgggatccctctggaacaagtctggaaagat
ctcatcgccatggcaacggaccaagtggatgtggtctctttttactggacgttaactggg
gaagacatcaaagttaattcttccactgacgtacctggaaggaatatcctgaaagaactt
ggggagttgccctccaggaatatatctgtccgtgtggtgaccagtgttccctcagttaga
acaaactccacagatttaaagatcttaaagcagaaaggagtccatgtgagggaggtgaat
tttgggcgcctgacacaaggcgtcctccacagcaagttctggatcgttgacagaaaacat
gtgtttattggaagcgcaaacatggattggagagctctaacacaggtgaaggaattagga
gtggtcatctacaactgctccagtgtagcaaaggacctccataagatcttccagtcgtac
tgggtgatgggacagtcaaacagcaccctgccgcagccctggcctgcaaagttcgagact
gacatcaacttagatcaccccctgctggtggaagctgagaatgtctccagcagcatttac
ctctcagcttctccaccatcattctgtcctccatcaaggactcaggacctggaggctatt
ctctccatcatctcagaggctcaacactatgttgatgtatctgtcatggagtacttcccc
accacacgctttgaaaggcctctgaaatactggccgttcatcgatgacgccatcaggatg
gccgcattcgagaggaagattaagttccggatgctgatcagctgcgggcgggactctgat
ccagccatgcttcccttccttcagtctctagcctcaatggacaaccctcacgatgatatc
agcattcaagtaaaattgtacattgtgcctgtgggaaaccagacagatattccatactcc
agagtcaaccacaataagtacatggtgacagataaagtagcttacgttggtacctccaac
tggtcaggggactactttattaccacagctggagtgggcctagtgatttcccagcatgct
cctcaacctgaatggaagaccaaggccctgcagagccagctcagggcggtttttgacaga
gactggtactctgagtatgctgtgaacctgactgacctggggcaccgccctgactgtgca
ctatcaacgtga
DBGET
integrated database retrieval system
