Lates calcarifer (barramundi perch): 108892521
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Entry
108892521 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: formin-1-like
KO
K10367
formin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108892521
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
108892521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
Motif
Other DBs
NCBI-GeneID:
108892521
NCBI-ProteinID:
XP_018545636
UniProt:
A0AAJ7Q3I6
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All DBs
Position
LG19:complement(9825544..9878177)
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AA seq
1294 aa
AA seq
DB search
MAPIMEGTHTVLLLYAPIRELSNISLYFPKRQAPSFKYRSRAPHLERASNDHDWGKEDLA
VSEQRGQSSNSSGKLLNSQQATKEAVAELCWLAAEHHQLLADLLSLCRDCARKVRMGNQD
GKLQDYMEGQEVHLGGQVLSSSSNYSLTVSPEHKRTTSKSKKMKKLGSKTRDSAEDFLHS
KMKKKVTSGTSGVELPAQNSVSISAASVVEQITGIPASVHVSDSPVTGSYVSAVSNPILP
MEEPFQIAREGWDFMEDNRTFDADMYFCNDFSEYDSELGYESSSCSLIEGLTRRESGSNL
RPIKRFDSPFETLSDDASTVKSAQQLYSEINQRSTGVRVVAKVQDVEGKVQHVSHASLDR
EGPAEWRGPNTDHLLRVSREKTGNRHSEGLRLPLSNTTNPSPPAKSHLKSPSSPSLAGVF
NTSFPASNSLQSMSPVLSPLSSKQASPQLNHRIVLLSDKDIDPDKDSSSNTDESKLFTEV
IDKNGNKRTVTRLDLNLSRRPSNSKWNSSSNSTTTEDSLLRQDDIWMLDGDDPQEAPSRV
PRPDHLDFLRITPPEDDIIGDTPYYPKLECTTEVTSPTDSEDRTPGRLQAVWPPPKPKDE
EEKVGLKYTEAEHQAALLQLKRECKEDLERMHSDFELKIFQLRGEHAVSLSHLEGVIAKM
QQDRSYNMGQERGEVRDVGVSTSDDLMPKTCRTVGIQTDRETFIKSPDGEGGGIAQSPNQ
NVPKKLNLDSIGLNLKGEAAPGPAGPAPPPPPPPPPPPPPPPPGLAGPPPPPPPPPPPPP
LPGNAGAPPPPPPPPPPPLPGGGPPAPPPPPPPPGLPGAGRPPPPPPGMGPPPPPPMGGF
GFGQKVEKAPRKPAIEPTCPMKPLYWTRIQIQDNNNNTLWGSLEEPNIVNTNEFEDLFSK
ATLQPKKKPLSDTFEKKAKTKKIIKLLDGKRSQAVGILISSLHLEMKDIQQAVLTVDNSV
VDLETIEALYENRATSDEMEKIMRHYEKSKEDEVKLLDKPEQFLYELSQIPDFAGRAHCI
IFQSVFLDTISSIRRKVEIISNVSKELLECNSLRDVMGLVLAFGNYMNGGNRTRGQADGF
GLEILPKLKDVKSRDNHINLVDYVVLYYLRNFDKHAGTEKSVFPMPETQDFFQAAQVKFE
DLTKDIRKLKRDLTACEKEVQKVCANSTEENLQPFQDKMEGFISAAQKDHSAEEDRLNSA
QKSFQDMVSYFGIKPKSGEKEVAPSYVFMLWYEFCTDFKNTWIRQNKNISKERLKEAQEN
IKKITAEKRVETKKINANSLKERLRQKEASVSSS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggcacccatcatggagggcacgcacaccgtcttgctcctgtatgcgcccatccgtgag
ctgagcaacatcagcctgtatttccccaagaggcaggccccgagcttcaagtacaggagc
cgcgcccctcatttggaaagggccagtaatgaccatgactggggaaaggaggatctcgcg
gtgtctgaacaaaggggccagtcttccaactcctcaggcaaactcctcaactcccagcag
gcaacaaaggaagctgttgcagagctctgctggctggcggcagagcaccaccagctgctg
gcggatctcttatcgctgtgcagggattgtgccaggaaagtcaggatgggtaaccaggat
gggaaactccaggattacatggagggtcaggaggttcaccttggaggtcaggttctcagc
agcagcagcaactattctctcaccgtgtctccagagcacaagagaaccacatccaagagc
aagaagatgaaaaagttgggaagcaaaacgcgtgacagtgctgaggatttcctacacagt
aagatgaagaagaaagttactagtggaacttcgggtgttgaacttcctgctcagaacagt
gtgtccatatctgcagcttcagtagtggaacagatcacaggtatcccagcctctgtccac
gtctctgacagcccagtcaccggatcttatgtcagtgctgtcagtaatcccatcctgcca
atggaggaacccttccagatcgctcgtgagggctgggacttcatggaagacaaccggaca
tttgatgctgacatgtatttctgcaatgacttctcagagtatgacagcgagctgggttat
gagtcgtcttcttgtagcctgattgaagggctgacccgacgggagagtgggagcaacctt
cgaccaattaagaggtttgattctccgttcgagacgttatctgatgacgcatcaacagtc
aagtccgctcagcagctgtacagcgagatcaatcagaggagtacaggggtcagggtggtg
gctaaggtgcaggatgtagaggggaaggtgcaacatgtcagccatgcaagcctagatagg
gaagggccagctgagtggagagggccaaacacagatcacctgctgagagtcagtagggaa
aagacaggtaacaggcactctgaggggctacggttgcccctgtcaaacactaccaatccc
tcacccccagccaaatcccacctaaagagcccctcttctccttctctcgccggggtcttc
aacacatctttccctgcctcaaacagcctccagagcatgtccccagtcctgtcccctctg
tcttctaagcaggcaagcccacagctcaaccaccgcattgtgctgctatccgacaaggac
atagacccagacaaagacagctccagtaacacagatgagtccaaactcttcaccgaggtc
attgacaagaatggcaacaagcggaccgtcacccgtctggacctgaacctcagcaggcgg
ccgagcaactccaagtggaattcctccagcaactccacgacaacagaggactccctcttg
cgtcaggatgatatttggatgctggatggagatgaccctcaggaggccccttcccgcgtc
ccacgccctgatcaccttgacttcctacgcatcacaccgcccgaggatgacatcatcggg
gacactccctactatcccaagctggagtgcacgacagaggtcacgtcacctacagacagt
gaagaccgcacaccagggcggctgcaggccgtgtggcccccacccaaacctaaagatgag
gaggagaaggtggggctcaagtacaccgaggcagagcaccaagctgccctcttgcagctg
aagagagagtgcaaggaagacctggagaggatgcattccgactttgagcttaagatcttc
cagctgcgaggtgagcatgccgtctcgctgtcacacctcgagggagtcatcgctaagatg
caacaagacaggtcatacaacatgggtcaggagcgcggcgaggtccgtgacgtcggcgtg
tccacctcagacgatctgatgcccaagacctgccgcaccgtgggtatccagacggacagg
gagaccttcatcaagagccctgatggcgagggtggcgggattgctcaaagccccaaccag
aacgtgcccaaaaaactcaacttagactctattggtctgaatctaaagggcgaagcggcc
cctggaccagctggaccagccccgccacctcctcctcctcctccgcctcctcctcctcct
cccccaccaggccttgcagggccaccaccaccaccacccccccctcctcctcctccccct
ttaccaggcaacgcaggagcgccgccaccaccaccccctccacctcctcctcctctccct
ggaggtggcccaccggcccctccacctccgcctccccctcctggcctacctggagccggt
cgaccacctcctcctcctccaggcatgggccctccacctcctccccctatgggagggttc
ggttttggccagaaagtggagaaagccccgcggaagcctgccatcgagccaacctgtccc
atgaagcctctgtactggaccaggatacagatacaggacaataacaacaacacgctgtgg
gggtctctggaggagccaaacatcgtcaacaccaatgaatttgaggatctgttctccaag
gccacgctacagccgaagaagaaacccctgtctgatacctttgagaagaaagccaaaact
aagaagattatcaagctgctggatgggaagcgttcacaagcagtcggcatcctcatatca
agcctgcatctggagatgaaggacattcaacaagctgttcttactgtggacaactctgtg
gtggatttggagaccattgaggctttatatgaaaatagggccaccagtgacgagatggaa
aagataatgagacattatgagaaatctaaagaagatgaagtcaaactgttggacaaacct
gaacagtttctctatgagctctcccagattcctgactttgccggtcgggcccactgtatc
atcttccagtcagtgttcctcgataccatctcctccatccgtcgcaaggtggagattatc
tccaatgtcagcaaagagctgctagagtgcaacagtttgcgggatgtaatgggtcttgtt
ctggcctttgggaactatatgaatggagggaacaggacaagaggtcaggctgatggcttt
ggactagagatcctccccaaactaaaggatgtcaagagcagggacaatcatatcaatcta
gtggattacgtggttttatactaccttcggaactttgacaagcatgccggtacagaaaag
agtgtgttccctatgcctgagactcaggatttcttccaggctgctcaggttaagtttgaa
gacctcaccaaggacatcaggaagctgaagagagatctaacagcctgtgagaaggaggtg
cagaaggtgtgcgctaactcgacagaagaaaacctccagcccttccaggacaagatggag
ggattcatctctgcagctcaaaaggaccattcagctgaagaggaccggctcaattcagcc
cagaaaagtttccaggacatggtgagctacttcgggattaagcccaaatccggggagaaa
gaagtggccccgagttacgtctttatgctctggtacgagttttgcactgactttaagaac
acctggatacgacaaaacaagaacatctccaaggagaggttgaaggaagctcaagaaaac
atcaagaagatcacagcagagaagagagtcgaaaccaagaagatcaatgccaacagtctg
aaagaaaggctgcggcagaaggaagccagcgtgtcctccagctga
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