Lates calcarifer (barramundi perch): 108892579
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Entry
108892579 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: lateral signaling target protein 2 homolog
KO
K24780
lateral signaling target protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108892579
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
Others
108892579
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Gene cluster
GFIT
Motif
Pfam:
FYVE
PI3K_1B_p101
FYVE_CARP1-2
RIH_assoc
Motif
Other DBs
NCBI-GeneID:
108892579
NCBI-ProteinID:
XP_018545742
UniProt:
A0AAJ7VBX9
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Position
LG19:11733438..11756458
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AA seq
1021 aa
AA seq
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MNRFRKWLYKPKRTDPQLLAQFYYADEELNQVATELDSLDGRKDPQRCTLLVNQFRSCQD
NVLNIINQIMDECIPNDRANRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNREIES
IAMRPLAKDLTRSLEEVRNITRDQALRDLNLYTDRMKDALRHFDSLFAEFELSYVSAMVP
VKSPKEYYVQQEVIVLFCETVERALKLGYLTQDMIDDYEPALMFTIPRLAIVCGLVVYSE
GPLNLHRKSEDMSELFRPFRTLLKKIRDLLQTLTEEELMTLERNLCISQDGELSTGQGQA
TNSVPAPVQENHSSCSPANDTPKGESEGEQEHLALYVCPSQEEETAQVEKGWEEVETERG
EEEQEQGLLCEEAEEAELACSMQYDEEELEQLNMMVYLVGDEMSTLLSPPSQGQSPAHNP
NRGEAGGSSGASSTDASPRRLPRGRGRTGIYVEEEDRVFFMEDLDAAGDSITSISREACS
CIASPSKAPESAHPTQRKPGPRPDSVRNGWYSEAPSEQPCPQPRSQNVLCHNAKLPPCTT
APGSEPLPYTNGWEMGLEGTASETAEVIAHRMGGMKLSATVIFNPRSPSLTELAVDKLLL
PRPPPSEIEPCSPLVATHCLLNSCVCCGSCEDGHEDAVTTDSTGLGLGLALGLDKHSKTV
APSTVIQSSACRLPPRGHEPHSKGELTQVTPPSSRSSAEPLEEESNTQLCEKCLVVAPGP
GHHAQDCSSSGGDGPSLCNHQLRTEKRQQASGGRQRDKDKEMDKDKPGSKNSQRDTKEES
RRSSSFQNSPLSSVSGSDCESVTTCSLSSSAYTPSPVSSLTPSSGMSEDLDHQEIQLALE
DAKVAARNKIRSRFHSSSDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVMATKCEK
GDNDKQKKAGPVLRSAVLEDCALCQETISSSELAAKAREGQFEDPPDWVPDEACNSCIAC
KAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKAG
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctttcgaaagtggctgtataagcccaagaggacggaccctcagctcctggcc
cagttctactacgctgatgaagagctgaaccaggtggccactgagctggacagcctcgac
ggcaggaaggaccctcagagatgtaccctgctggtcaaccagttcagatcctgtcaggac
aatgtgttaaacattatcaatcagatcatggatgaatgtatccccaacgaccgggctaac
agagacttctgtgtcaagttccctgaggagattcgtcatgacaacttggcagggcagctg
tggtttggggctgagtgtttggctgccggctccatcatcatgaacagggagatagagagt
atagctatgagacccctggctaaggacctcactcgcagcctggaggaagtacgcaacatc
accagagaccaggccctgagagacctcaacttgtacacagaccgcatgaaggacgcattg
cgacatttcgacagcctttttgctgagtttgagctcagctatgtgtcagccatggtgcct
gtgaagtctcccaaagaatactatgtacagcaggaggtgattgtgctcttctgtgagact
gtggagagggctctgaaactgggctacctcacgcaggacatgatcgatgactatgaacct
gctctgatgtttacaattcccagactagccattgtgtgtgggctggttgtgtattcagag
gggcctcttaacctacaccgaaaatcagaggacatgtctgagctcttccggccttttcgc
actttattgaagaaaatccgagacctgctgcagaccctgactgaagaggagctgatgaca
ctggagaggaacctgtgtatctctcaggacggggagttgtccacgggccaggggcaggct
acaaacagtgtgccagcaccggtccaagagaatcactcatcctgcagccctgctaatgac
acccccaagggggagagtgagggggagcaggagcatctggctctgtatgtctgtcccagc
caggaggaggagacggcacaagtggaaaagggctgggaggaggtagagactgagagggga
gaggaggagcaggagcagggcctgctatgtgaggaggcagaggaggcagagctggcctgc
tctatgcagtatgacgaggaggaactggagcagctcaacatgatggtgtacctcgtagga
gacgagatgtccaccctgctgtcacctcccagtcagggtcagtccccagcccacaacccc
aacagaggagaagcaggaggttcaagtggggcctccagcactgacgcgtctccccgcagg
cttccacggggccggggaaggacaggcatctatgtagaggaggaggacagggttttcttc
atggaggacctggatgcagcaggagacagcatcaccagcatctcaagagaggcctgtagt
tgcattgcctctccttccaaagcaccggagtctgctcaccccacgcagcgcaagcccgga
ccacggccggattctgttcgaaatggctggtactctgaggccccgtctgagcagccatgc
ccacagccacgcagccagaacgtactctgtcataatgcaaagctcccaccatgcaccacc
gcccctggctctgaaccgctgccttacacgaacgggtgggagatgggtttagaggggaca
gcttctgaaactgccgaggtcatcgcccaccgtatgggtgggatgaagctttctgccacg
gtcatcttcaatccccgctccccgagcttgacggagctggccgtggacaagctgctgctg
ccgcggccccctccctccgagattgagccctgcagccctctggtggcaactcactgcctg
cttaactcgtgtgtctgctgtgggagctgcgaggatggccacgaggatgccgtcaccact
gacagcacaggactcggcttagggctcgcactgggattggacaagcactctaagaccgtg
gcccccagcaccgtcatccagtcttctgcttgccggttgcccccgcgaggtcacgagcct
cacagcaagggggaactcacccaggtgacaccgccatcttcccgcagctctgcagagccg
ctggaagaggagtcaaacacccagctctgcgagaagtgcctggtggtggctccagggccg
gggcatcacgctcaggactgtagctccagcggaggggatggaccctccctgtgcaaccac
cagctgaggactgaaaagaggcagcaggccagtggaggccgacagagggataaggataag
gagatggataaagacaagccaggaagtaaaaactcgcagagggacaccaaagaggagagc
aggaggagctccagttttcagaactctcccctcagctctgtgtcaggtagtgactgtgag
agtgtaaccacatgtagtctgtcaagcagtgcatatactcccagccccgtgagcagtctg
acccccagctcgggaatgtccgaagacctggaccatcaggagatccagctggctctggaa
gacgccaaggtggccgccaggaacaagatccgatcgcgcttccacagcagcagtgacctc
atccaccgtctctttgtttgtatatcaggtgttgcagatcagctgcagacaaactatgct
agtgaccttcgcagcatcctcaagactctgtttgaagtcatggcaaccaagtgtgagaag
ggagacaatgataagcagaagaaagcaggacctgtcctgcgtagtgccgtgctggaggac
tgcgctctctgtcaggagaccatttcttcttcagaattggctgccaaggcacgggagggc
cagttcgaagaccctcctgactgggtccctgatgaagcctgcaactcctgcattgcctgc
aaggctcccttcactgtcatccgcaggaagcatcactgtaggagctgtggaaagatcttc
tgctctcgctgctcatcccactcggcaccattgccccggtatggccaggtgaagcccgtc
agggtgtgcacacactgctacatgtttcacgtcacacccttctacagcgacaaggccggc
atctga
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