Lates calcarifer (barramundi perch): 108892708
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Entry
108892708 CDS
T04895
Name
(RefSeq) serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108892708
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
108892708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
108892708
NCBI-ProteinID:
XP_018545925
UniProt:
A0AAJ7Q3N8
A0A4W6FVN7
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MGDSDDEFDRRRRDKFRRERSDMERSREREERRRDDWPDRDWDRGRERRRDYDRGRRERF
SPPRHMSPQHKRMRRDWDDHRGEPYRYDLPYGGGGGAPFPGAGPQGWHPDLPHLHPHHGG
HPLQGRLGMVDPDLPPPGPPTMRSFKEFLLNMEDSVDETEAVKRYNQYKLDFRRQQLQDF
FLQHKDQEWFRSKYHPDDITARKAESLSALKTRLSVFLFLLDNNWLDNVSLDMDHGPAII
KLLDAAVIKMEGGTDFDLQVLEAPTAPAAGGGEASSSGGGGAGGAGERGQGDASGGHVSG
QSGSETTGSRAEGTSGGETAEMKDCEKDREEDAKQNGEKEKDEEEEEEEKKEDEEEEEKS
KKGRKRKRSVSADSGEGSASDSDSSHSDGEKEEEEKEEEEEEDREDERRKERGKEREKEV
PAKPRPLHLTTSLFIRSIPPEVSKEEITALCRRYPGFLRVALSDPQPERRFFRRCWVTFD
RSVNIKETCWNLQNIRLRDCELSPVVNRDLCRRVRTVNGLTHHKPVVRNDIRLSARLVHS
LDQRGELWAGQMETNPVLKNITDYLIEEVSAEEEELTGAAGGNADDAGDAKDPASSEVTV
ETDDKLLQVLDRLLLYLRLVHSVDYYNFCEYPAEDEMPHRCGLIHVRGPLPVAKITAAEV
SEHQRMCEERLAPLLSPSETLSEEEAARLGKKDPEQEVEKFLSANTQELSKDKWLCPLSG
KKFKAPEFVRKHILNKHAEKVAAVRQEVEFFNNFLLDAKRPALPESKPLLPPAQAAPPGV
PGFPGQSPQQQSLLGYPPGVRPPMPGFPGGGPPYPPNQFGAGRGNYDNFRGHLGGGGGGG
GGFPGKQRNTRGVRGDPRSIIEYRDLDAPDDLDFF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcgatgatgagttcgacaggaggaggcgggacaagttcaggagggagagg
agcgacatggagcggtcgagagagagggaggagaggaggagggacgactggcccgacagg
gactgggaccgcggcagagagaggaggagggattacgaccgaggtcgcagagagaggttt
tctcctcccagacacatgagcccgcagcacaaacgcatgaggagagactgggacgaccac
cggggggagccgtaccgctacgacctgccgtacggaggaggaggaggggctccgtttcca
ggggcggggcctcagggctggcaccctgacctcccacaccttcacccgcaccacggaggt
cacccgctgcagggcaggttggggatggtggatccagacctgcctcctcctggtcctccc
accatgaggagctttaaggagttcctgttgaacatggaggacagcgtcgatgagacggag
gcggtgaagcgctacaatcagtacaaactggacttcaggcggcagcagctgcaggacttc
ttcctccagcacaaagaccaggagtggttccgctcaaagtaccaccccgatgacatcacg
gcgaggaaggcggagtctctgtccgccctcaaaacccggctcagcgtcttcctcttcctg
ctggacaacaactggctggacaacgtgtctctggacatggaccacggccccgccatcatc
aaactgctggacgcagctgtgataaagatggagggaggtacagactttgacctgcaggtc
ctggaggcaccgactgctcctgcagcgggcggaggggaggcgagcagcagcggaggagga
ggagcaggaggagcaggagagaggggtcagggagacgccagcggaggacatgtgagcggt
cagagcggctcagagacgacggggagtcgggcggaggggacaagcggcggagagacggca
gagatgaaagactgtgagaaggaccgcgaggaggacgccaagcagaacggagagaaggag
aaggacgaggaggaggaagaggaggagaagaaagaggacgaggaggaggaggagaagtca
aagaagggcaggaagaggaaacgcagtgtgtcagctgacagtggggagggcagcgcctcc
gactcagactcctcccactctgacggagagaaggaggaggaggagaaggaggaggaggag
gaggaggacagagaggatgagcgccgtaaagagcgagggaaggagagggagaaggaggtg
ccggcaaagccccgccccctccacctcaccacctccctgttcatcaggagcatcccccca
gaggtgtccaaggaggagatcactgctctgtgtcgcaggtacccgggcttcctgcgggtg
gcgctgtcggaccctcagcctgagaggaggttcttcaggcgctgctgggtgacgtttgac
cgcagtgtgaacatcaaggagacgtgctggaacctgcagaacatcaggctcagagactgt
gaactgtctccggtggtcaacagagacctgtgtcgacgtgtccgcaccgttaacggcctg
acgcaccacaaacctgtggtgaggaacgacatccgcctgtcggcccgactcgtccacagc
ctggaccagaggggggagctgtgggcaggacagatggagaccaaccctgtcctgaagaac
atcacagattacctgatagaggaggtgagcgctgaggaggaggagctgaccggagccgcc
gggggaaacgccgacgacgcgggagacgccaaagaccccgcctcctcggaggttaccgtg
gagacggacgacaagctgctgcaggtgttggacaggctgctgctctacctgcgcctggtt
cactctgtagattattacaacttctgtgagtatcctgcagaggacgagatgcctcatcgc
tgcggcctcatccacgtacgaggacccctacctgtggccaagatcactgcagccgaggtg
agtgaacatcagaggatgtgtgaggagagactggctcctctgctgtcgccttcagagacg
ctgagcgaagaagaagctgcaagactggggaagaaggaccctgaacaagaggtggagaag
ttcctgtcagccaacactcaggagctcagtaaagacaagtggctctgtcctctgagcggg
aagaagttcaaggctccggagtttgtgcgtaaacacatcctgaacaaacacgcagagaag
gtcgccgccgtcagacaggaagtcgagttcttcaacaacttcctgctggacgccaagaga
cctgcgctacctgagagcaagcccctcctaccgccagctcaagccgctccacctggcgta
cctggattccctgggcagtcaccgcagcagcaaagccttctgggatatccacctggagtc
agacctcccatgccgggcttccctggcggaggacctccctacccccccaaccagtttggg
gcgggccgtggtaactatgacaacttcagaggtcatttaggaggaggagggggaggggga
ggagggtttcctgggaaacagcggaacaccaggggcgtgcgaggagacccgcggtcgatc
atcgagtacagagacctcgacgctcccgacgacctcgacttcttctga
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