Lates calcarifer (barramundi perch): 108892718
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Entry
108892718 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108892718
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
108892718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_Teneurin
EGF_2
EGF_MSP1_1
Ribophorin_II_2nd
InlK_D3
Motif
Other DBs
NCBI-GeneID:
108892718
NCBI-ProteinID:
XP_018545937
UniProt:
A0AAJ7VC25
LinkDB
All DBs
Position
LG21:1002060..1043932
Genome browser
AA seq
2251 aa
AA seq
DB search
MQLSLLCVWTSWILTLQSAAQLQPHREQEGGRPGWRLDADKPPAVRETGERLRGGQAGRR
AALTGPHVCGGRCCVGWTLSPKTRRCTKPRCFPPCHNGALCRHSNRCVCRRGFRGSRCEF
STVTFSLPGRPLTSTHPTVTPLHTPPPPSVTPQRNTRPAQSHVITARSGPAAVSPPPAST
RATRITKVIPRPKPGASDLNPSSAPAETHKEEDATLGLKTEGFQKRVPEQEENQASLKNE
EVKMKPTPEFNDLQPRTGDTEDQEGAAEITGKTPNLKSDSEPEVESNSETEIKEQVAPGS
QTKNQNLEAEESSAGRLTASLIPNLESSLRPTVEKGESKSGSNVEERLNVKTSLRSRLDD
SEGSSRSSKAQFDPGPKVQDQRPGKTVDAGEMRRREEKKKEVKTGGAKKQSLSLREAQAL
LLRKTLSRGGRGDKMAALLMKHIEKERKKLRTVTSSSSLSNSSISSSVKTSVKSFHTQKG
QYTVHITAPTADGQTATGGGGGGGGGGLERIQVMFTPTICKVRCSQDRCVNYCERGNMTT
LYSSNSEGAGGGGGGGGRRDSSHGPGFRVFLCPLLCKNGGVCLQKDRCLCPPNFTGKFCQ
IPVAPTSAAAPRSAAAAASPSSTNEIVKPALLSPMAANQELTQSEFLLPLGQNQEAARSG
APGPSMVKVRVQHPPEASVKIHQVVKVSGFSPTLRTHPSSSSSSSSSSSSSSSSSSGSAG
APAPAGWGVQAQTVRGDGTYTQHSGFKYCFREVKDGQCSSPLPGLRSKEMCCRGIGKGWG
ITDCVLCPENTGQSNSSCPAGFERANGTQCVDVNECLQPGLCENGICVNTRGSYSCVCRA
GFILDASHGICISQSVISEEKGQCYRVLGSGLGPSSCSLPILRNITKQICCCSRVGKAWG
PECQRCPYFGSVAFKEICPAGPGYHYSASALQFNQRVKEQLGGRGAPLVTDGNQENQGPI
LVPAAAEPPGLSRNPPPLKPQLLERVLHGAPGSASTSSTQTRPSPPQPQPGAPSQPQTRP
AAGSTPSRPVQPGTTGTTATQDRPQTPGRPGIQFTTPPRPQPPSTGSQAGARPSSGSRPD
QPPARGDSLPVPAQPQSPERGSRPSELLPPVQSRPAVSPTIRPTRVQPVRSVCDTRPGVC
GRGRCVDQPGGKHTCVCDQGYQPNSQRTFCQDVNECVQSPGVCSVGECVNTMGSYRCVCP
PGYRSSSQQTSCQDIDECQLNPCRNGRCDNTPGSYRCVCRLGYRLVGNTCTDVDECEDPL
LCPGQECVNTQGSYRCASCQPGYGLLNRLCTDIDECRQALCANGRCENTPGSYRCICRHG
YKLQNNTCTDVDECAEPSQCPGQMCVNSVGSYRCVSCRPGYTLTNRQCTDINECENRESC
PGQQCVNSEGSFICVDCQQGYHSVNGVCTDVDECVQVSQCPGQQCVNTVGSYHCVSCQPG
YSIKDGSCQDVDECASAGACEAERVCVNTAGSFRCDCRPGYRTAGLGRQCRDINECLEGD
FCFSRGECVNTPGSYTCVCAQGFTLSDNRTACLDVDECERSSVCVDGRCVNTDGSFYCQC
QTGFTTNPERTTCLDVDECVSSSGAVCGSRRCENTIGSYRCLTSCQPGYQVTQTGRCVDV
NECVNETVCGDHAFCQNLIGTYLCVCDQGFTSTADGKACVDEDECVSMPGVCGSARCENV
EGSFMCECDGAAEFDTTSRTCVSALRPAETVVLISPPPPISSFHVSLEELDPMLPPLPAA
RPGELRECYYNLAERGTCSLLATNTSQQECCCTVGEGWGLGCQYHTCPPPDSAEFLSLCP
SGRGYVTTGPGAFSYRDVDECKRFHPEVCKNGVCVNNIPGYNCYCSSGYVYNSTLLECVD
HDECEEESCVGGVCVNTVGSYYCSCPHPLVLDDTQRNCVNSSHLTVDENLSVCWQHLSAD
LMCQSPLLGAQVTFTDCCCLYGEGWGMECALCPATDSDDYAFLCSSFPPLFPSFPDSGGS
ETGVRPGAGRGGAGAGAPPQFPPYGPDSFPPPVLPSRDFSRPDYDDYSPAGGGRSSFRGR
TPASFSPPDGGYRRPEYSTGYYSEGDYTSPDTSPPRPPSFRLPPDPRAETAFGARPPPPS
RPDGPPLSLAPLPGAPYEEPEEEEEETWRPGPPFPPFTERSRGGGAPPRRVYERRYESYA
GLSAAEDCGILHGCENGRCIRVAEGYTCDCYQGYELDMTSMTCIDINECEDGVSVEYPCV
NARCVNTEGSFRCVCRRGYIMSRRPNHCVAA
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgtctctgctctgcgtctggaccagctggatcttaacgctccagtccgcggct
cagcttcagcctcaccgggagcaggagggcgggaggcccggctggaggctggacgccgac
aagccgccagcggtgagggagaccggggagaggctccggggaggacaggccggcaggaga
gcagctctgaccggccctcatgtctgtggaggtcggtgttgtgtcggatggactttgtcg
cctaaaaccaggagatgcaccaaacccaggtgtttccctccttgccataacggagcgttg
tgccgtcactctaaccgctgtgtttgcagacgaggtttccgcggttctcgctgcgagttt
tccacggtgacgttttctctgcccggacggcctctgacctccacccacccgaccgtcacc
cccctccacacccctccaccaccgtccgtcacccctcagagaaacaccagacctgctcag
agccatgtcatcacagctcgctctggtcctgctgctgtttcacctccacctgcctccacc
cgagctaccaggataacaaaggtgatccccagacccaaacccggagcctcagacctgaat
ccatcctctgctccagctgaaacccacaaagaggaggatgctacacttggactcaaaact
gaaggttttcagaaaagggttccagagcaggaggagaaccaagcttctctgaaaaatgaa
gaggtgaagatgaaacccacacccgagttcaacgacctccagccccggacaggagacacc
gaagaccaagagggggcagcagagatcacaggaaaaactccaaacctgaagtctgattca
gaacctgaggtagagtcaaactcagagactgagataaaagaacaagtagctccagggtct
cagacaaaaaaccagaatttagaggctgaagaaagttcagcaggaagattaacagcctct
ctaatcccaaatctggagtcgagtttgaggccgacagtagagaaaggagagtctaaatct
gggtctaatgtagaggagagactgaatgtgaaaactagtttaaggtccaggttagacgac
agtgaaggatcctccaggagctcaaaggctcagtttgatccaggacctaaagtacaggac
caaagaccagggaaaactgtggatgctggagagatgaggaggagggaggagaagaagaag
gaggtgaagactggaggagcaaagaagcagtcgctgagtctgagggaggctcaggccctg
ctgctgaggaagacgctgtcccggggagggagaggagacaagatggccgccctgctgatg
aaacacattgagaaggagaggaagaaacttcgcactgtgacctcctcttcctctctttct
aactcctccatctcatcctcagtaaagaccagtgtgaagagtttccacactcagaaggga
cagtacaccgtccacatcactgcacccacagctgatggacagacagccacaggaggagga
ggaggaggaggaggaggagggctggagaggatccaggtgatgttcacgccgaccatctgc
aaggtgcgctgcagccaggaccgctgtgtcaactactgcgagagaggcaacatgaccacg
ctgtacagcagcaacagtgagggggcaggaggaggaggaggaggaggaggaaggagagac
agctcccatggaccaggattcagagtcttcctctgtcctctgctctgtaagaacggaggc
gtctgtctgcagaaggatcgctgtctctgtcctccaaacttcaccggaaagttctgccag
atccctgtcgcccccacgtctgccgccgcgccccgctccgctgccgccgccgcctcgccg
tcctccaccaacgagatcgtcaagcccgcactcctctcccccatggcagccaatcaggag
ctgacccagtcagagttcctcctgccgctgggacagaaccaggaggcggcgaggtccgga
gctcctggtccgtccatggtgaaggtcagagtgcagcacccccctgaggccagcgtgaag
atccaccaggtggtgaaggtgtctggattcagccccaccctgcggactcacccctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcggggtctgcgggg
gctccggctcctgcaggttggggggttcaggcccagacggtgagaggggacggcacgtac
acccaacactccgggttcaagtactgcttcagagaggtcaaagacggacagtgcagctct
cctctgcctggactgaggagtaaggaaatgtgctgcagagggatcgggaagggctgggga
atcaccgactgtgtcctctgtcctgaaaacacaggtcagagcaacagcagctgtcctgct
ggttttgaacgagccaatggaacgcagtgtgtcgatgtgaatgagtgcctccagccgggg
ctgtgtgagaacgggatctgtgtgaacaccagggggagctatagctgtgtgtgtagggcg
gggttcatcctcgacgcctcacatggaatctgcatctcccagagtgtgatatcagaggag
aaaggtcagtgttaccgggtcctgggctcaggtctgggtccgtcctcctgctccctgccc
atcctcaggaacatcaccaaacagatctgctgctgcagccgagtcggcaaagcctggggc
cctgaatgtcagagatgtccttactttggttcagtggcctttaaggagatctgtccagcc
ggtcctgggtatcactactcggcctcagccctgcagttcaaccagagagtcaaggagcag
ctggggggccgaggggccccgctggtaaccgacggcaaccaggaaaaccagggtcctatt
ctggttccagcagcagcggagcctccaggtctcagcagaaaccctcctcctctgaaacca
cagctgctggagcgagtacttcacggagctcctggatcagccagtaccagcagcacccag
accaggcccagtccacctcagcctcagcccggggctccgtctcagcctcagacccgcccg
gccgccggctccaccccctccaggcccgtacagcccggcaccaccggcaccacggctacc
caggacagaccccagactcccggcagaccaggaatccagttcactacaccaccgagacca
cagcccccgtccaccgggagtcaagcaggtgctcggccctcctctgggtcccggccggat
cagcctccggccagaggggactctctccccgttcctgcccagccacagagccccgagcgt
gggtcgagacccagcgagctgctccctcctgtgcagagcagaccggccgtcagcccgacg
atcagacccaccagagtccagcccgtgcgaagtgtgtgtgacaccagaccaggtgtgtgt
gggcgtggccgctgtgtggatcagccaggtgggaaacacacctgtgtgtgtgatcaggga
taccagcccaactctcagcgcacattctgccaagatgtgaatgagtgtgtgcagtctcca
ggtgtgtgttcggtgggagagtgtgtgaacaccatgggaagctacaggtgtgtgtgtccg
cctggatacaggagcagcagccagcagaccagttgtcaagacatcgacgagtgccagctg
aacccctgcaggaacggtcgctgtgacaacacgccgggcagctacaggtgtgtctgtcgc
cttggttacaggctcgtcggcaacacctgcacagatgtggacgagtgtgaggaccctctg
ctgtgtccaggtcaggagtgtgtcaacactcagggctcgtaccgctgtgcgtcctgtcag
cctggatatggactcctcaacaggctctgtacagacattgacgagtgtcgccaggctctc
tgcgccaacggtcgctgtgaaaacacacctgggagctaccgctgcatctgtcgccatggt
tacaagctccagaacaacacctgtacagatgtggacgagtgtgcggagccgtctcagtgt
cctggtcagatgtgtgtgaactctgtggggtcgtaccgctgtgtgtcctgtcgaccagga
tacacactgaccaacagacagtgtacagatataaatgagtgtgagaacagggagtcttgt
cctgggcagcagtgtgtgaactctgagggatccttcatctgtgtggactgtcagcaggga
taccacagtgtgaacggagtctgcacagatgtggatgagtgtgtgcaggtctctcagtgt
cctggtcagcagtgtgtgaacactgtgggctcgtaccactgtgtgtcctgtcagcctggg
tacagcatcaaagatggctcctgccaagatgtagacgagtgtgcgagtgccggggcgtgc
gaggccgagcgagtgtgcgtgaacactgccggctcgttcaggtgcgactgtcggcccggg
tatcgaaccgccggcctggggagacagtgcagagacattaacgagtgtttggagggagat
ttctgtttctccagaggagagtgtgtgaacacacctggatcctacacctgtgtgtgtgct
caggggttcacactgagcgacaacaggacggcctgtctcgatgtggatgagtgtgagcgg
tcgagtgtgtgtgtggacgggcgctgtgtgaacaccgacggctccttctactgccagtgt
caaaccggcttcaccaccaaccctgagaggacaacctgcctcgatgttgacgagtgcgtc
tcgtccagcggcgcagtctgcgggtcgcgtcgctgtgaaaacacgattggttcgtaccgc
tgcctcacttcctgtcagccgggctaccaggtgacgcagaccggcaggtgtgtagatgta
aacgaatgtgtcaatgagacggtgtgtggggatcacgccttctgtcagaacctgatagga
acctacctgtgtgtgtgcgaccagggcttcacctccaccgccgacggaaaagcctgcgtg
gacgaggatgagtgtgtgtccatgccgggtgtgtgtggttcggctcgttgtgagaacgtg
gagggatccttcatgtgtgaatgtgacggagcagctgagttcgacacgacgtccagaacg
tgtgtcagcgctttacgaccagcagagacagtcgtcctcatctcccctcccccccccatc
tcctccttccacgtcagtctggaggagctggatccgatgctgccccccctccctgcggct
cgtcccggcgagctcagggagtgttactacaacctggcagagcgagggacctgcagcctg
ctggccaccaacaccagccagcaggagtgctgctgcacggtgggggagggctgggggctg
ggctgccagtaccacacctgcccccccccagactcagccgagtttctgtccctgtgtccc
agtgggagaggatatgttacgactggaccaggagccttcagctacagagatgtggacgag
tgtaagcgtttccatcctgaggtgtgtaagaacggagtgtgtgtcaacaacatccctgga
tacaactgttactgctccagtggatacgtctacaacagcacactgctggagtgtgtcgat
catgacgagtgtgaggaggagagctgtgtaggaggagtgtgtgtgaacacggtgggttca
tattactgcagctgtcctcatcctctggtcctcgacgacacacaacgcaactgtgtcaac
tcctcacacctcactgtggatgagaacctgtctgtttgctggcagcatctctcagcagac
ctgatgtgtcagagtcctctgctcggggctcaggtcaccttcactgactgctgctgtctg
tatggggagggctgggggatggagtgcgccctctgtcccgccaccgactccgacgactac
gccttcctctgcagctccttccctcctctgtttcccagttttccagattcaggcggatca
gaaacaggagtgagaccaggagcaggacgaggaggagcaggagcaggagctcctcctcag
tttcctccctacggtccagactccttccctcctcctgtgctccccagcagagacttcagt
cgtcctgactatgacgattactccccagcaggaggcggcaggtcgagcttcagagggagg
actcctgcctccttcagtccgcctgacggaggttatcgcaggcctgagtacagcactggt
tactactctgaaggagactacacctcccctgacacctccccacccagacctccctccttc
cgcctccctccggacccccgggcagagacggcgttcggggcccggcctcctcctccatcc
cggcccgacggtcctcccctcagcctggccccgctgcccggagctccctacgaggagccg
gaggaggaggaggaggagacgtggaggccgggcccgcccttccctcccttcacagagagg
agcagaggaggaggagcaccaccgaggagggtgtatgagagacgttacgagtcgtacgcc
ggcctgagcgcagcagaggattgtgggatacttcacggctgtgagaacggcaggtgtatc
cgtgtcgccgagggttacacctgtgactgttaccaaggatacgagctggacatgacctcc
atgacctgtatagatataaacgagtgtgaggacggcgtcagcgtggagtacccctgtgtg
aacgctcgctgcgtgaacaccgaaggctcgttccgctgcgtctgcaggagaggatacatc
atgtcccgcagaccgaaccactgtgtggccgcgtag
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