Lates calcarifer (barramundi perch): 108892757
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Entry
108892757 CDS
T04895
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial isoform X1
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00220
Arginine biosynthesis
lcf00250
Alanine, aspartate and glutamate metabolism
lcf00910
Nitrogen metabolism
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
lcf01230
Biosynthesis of amino acids
Module
lcf_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
108892757
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108892757
00220 Arginine biosynthesis
108892757
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108892757
Enzymes [BR:
lcf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
108892757
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
108892757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
108892757
NCBI-ProteinID:
XP_018545987
UniProt:
A0AAJ7Q3N9
LinkDB
All DBs
Position
LG1:13880802..13924623
Genome browser
AA seq
1506 aa
AA seq
DB search
MTKILLAYSVVKSLRQGYVVGRRVGNTSAALRLQTSKLFSVKAQTAHLVLEDGTRMKGFS
FGHDASVAGELVFNTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNTQELDELGLRKH
VESDRIQVSGLLVQDYSHEYSHWNSVKSLGQWLQEEKVPALFGIDTRMLTKVIRDKGTVL
GKIEFDGQPVEISDPNQKNLVAEVSTKEPKVFGKGNPIKVVAIDCGIKHNIIRLLVKRGA
EVHLVPWDQDLLSLDYDGLFISNGPGDPSLAKTLIQNVQKVLESDRPEPVFGICMGNQIT
ALAAGAKSYKLPMGNRGQNQPVLNVMTDQAFITAQNHGYGIDSESLPPGWSPLFINANDG
TNEGIMHNTKPVFTAQFHPEAKGGPTDTEFLFDAFISLIKKGEDANIVSVMPKKPHIPPR
AQVSKVLVLGSGGLSIGQAGEFDYSGSQAIKAMKEENLKTVLMNPNIASVQTNEVGTKQA
DSVYFLPVTPQFVTEVIKTERPDGILLSMGGQTALNCGVELFQRGILEKYGVKVLGTPVE
SIMATEDRQLFADKLMEINEKIAPSIAVESVSDALKAAEQIGYPVMLRSAYALGGLGSGL
CANKEKLEETAHKALAMSSQILVEKSLLGWKEVEYEVVRDVADNCVTVCNMENFDPLGIH
TGDSIVVAPSQTLSNEEYHMLRETAIKVVRHLGIVGECNIQYALHPSSLEYCIIEVNARL
SRSSALASKATGYPLAFVAAKLALGIPLPEIKNAVSEKTTACFEPSLDYIVTKIPRWDLD
RFQGMSREIGSAMKSVGEVMAVGRTFEESVQKALRMCHPSVDGFVPRLPLKKAWTDTQDL
QQELAVPSSTRIFSLAKALHSGMSVDQIHQLTAIDKWFLHKLHRITQLEQHLANYKSGTV
PRGLLLKAKQDGFSDRQVGQILGSSERVARELRLTQSIRPWVKQIDTLAAEYPAMTNYLY
CTYHGQEHDLDFKDQGIMVLGCGPYHIGSSVEFDWCAVSSIRALRQMGKKTVVVNHNPET
VSTDFDECDRLYFEELTLERILDITQQEGCSGSIVSVGGQIPNNLAVPLHLSGVKILGTN
PLQIDRAEERSIFSSVLDDLGVAQAPWRALSSLEDAFAFANQVGYPCLLRPSYVLSGSAM
NVVYGEEEMKRFLEEATQVSQEHPVVITKFIRGAREVEVDAVAKSGKVLVHAITEHVEDA
GVHSGDATLMLPTQTISQGALEKVKAATRKIAQAFEISGPFNTQFLVKGNDVMVIECNLR
ASRSFPFVSKTIGVDFINVATKVMVGEPLDEDSLPSLEKPIIPVDYVGIKAPMFSWPRLR
DADPVLRCEMASTGEVACFGPNIYSAFLKAMLSTGFKLPQKGILIGIQHSFRPNFLATAH
QLKEEGFKLYATEATSAWLCANDVPATPVAWPSEKGEDNSLPSINRLINEGHIDLVVNLP
NNNTRHLRDNFLIRRMAVDHGVPLITNYQVVKLFVEAIHYAGELDTTSLFHYRQKESQQR
GASQQS
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaattctgttagcttacagcgttgtgaaatccctgcgacaaggatatgtggtt
ggcagaagagtaggaaacacgtcggccgcgttgagacttcaaacttctaaactttttagt
gtgaaggcccagacagcccacctggtcttggaggatggcaccaggatgaaaggattttcc
tttgggcatgatgcctcggtagcaggggaactagtattcaatactggcctggttgggtat
cctgaggccctgaccgaccctagctacagaggtcagatcctgaccctgacttacccaatc
gtagggaactatggggtacccaacacccaggagctggatgagctgggcctgagaaagcat
gtggagtcagaccgcatccaggtatctggccttctggttcaagactacagccatgaatac
agccactggaactctgtcaagtctctgggtcaatggctacaagaggagaaggttcctgca
ctgtttgggatagacaccagaatgctgaccaaggtcatcagagacaagggcacagttttg
gggaagattgaatttgatgggcaacctgttgagatatctgatcccaaccagaaaaacctg
gtagcagaggtctcaaccaaggaacccaaagtttttggaaaaggaaacccaatcaaagtg
gtggccattgattgtggtattaaacataacataattcgcctgctggttaagaggggtgca
gaggtccaccttgtaccatgggaccaagacttgctgagtctagactacgatggcctgttc
atttcaaatgggccgggagatccatctctggctaagacactcatccagaatgttcagaag
gtgctggaaagtgatcgtcctgagccagtgtttggaatctgtatgggaaaccaaatcact
gccctggctgcaggagctaagtcatacaaactacctatgggcaacaggggccagaaccag
ccagtgctgaatgtaatgacagaccaggccttcattacagcgcagaaccatggctacggc
atagacagcgagtccctgcccccaggatggagcccgctgttcattaatgccaatgatggc
accaatgagggcatcatgcacaatactaagcctgtcttcacggctcaattccacccggag
gctaaaggtggtcccacagacacagagttcctctttgatgccttcatatccctgatcaaa
aaaggagaggatgccaacatagtttcagtaatgcccaaaaaaccccacatccctcccaga
gcgcaggtgtcaaaggtgttggtactgggctctggtggtctttctattggtcaggctgga
gagtttgactactcaggatctcaggccatcaaggccatgaaggaggagaatctgaagaca
gtgctcatgaacccaaacatagcctctgttcagaccaatgaggtgggcaccaaacaggct
gactctgtctattttctgcctgtcacaccgcaatttgtaactgaagtaatcaagactgag
cgtccggatggcatcctgctctccatgggtggacagaccgccctcaactgtggagtagaa
ttgttccagcgtggcatcctggaaaagtatggtgtgaaggtccttggaaccccggtggaa
tccatcatggccacagaggacaggcagctttttgctgacaaactgatggaaatcaacgag
aagattgcacccagtatagctgttgagtcggtgtctgatgccttaaaagctgcagagcag
attggttacccggtgatgttgcgatcggcctatgccctgggtggtctgggctctggtctg
tgtgccaacaaagaaaaactagaggaaactgcccacaaggctctggccatgagcagtcag
atcttagtggagaagtctttgctgggctggaaggaggtggaatatgaggtagtgagagac
gtggctgataactgtgtcaccgtctgcaacatggagaacttcgacccactgggcattcac
acaggtgactctatagtggtggcaccgagccagacgttgtccaatgaggagtaccacatg
ctccgtgagacagccatcaaagtggtccgtcaccttggcattgtaggtgaatgcaacatc
cagtacgccctacacccatcatccttggagtactgcatcattgaggttaatgcccggctc
tccagaagctcagctctggcatccaaagccactgggtaccccttagcatttgtagctgct
aagctggctctgggaatccccctaccagagatcaagaatgctgtatctgagaagaccaca
gcctgctttgaacccagtctagactacatcgttaccaaaatcccccgctgggacctggac
cgctttcagggcatgtcccgtgaaataggcagtgccatgaaaagtgttggagaggtgatg
gcagtgggccggacctttgaggagagtgtgcagaaggccctgaggatgtgtcatccatca
gtggatggctttgtgcccaggctgccactcaagaaagcctggactgacacccaggacctg
caacaggagctggctgtgccttccagtacccgcatcttctccctcgccaaggcacttcac
agtggtatgagtgtggatcagatccaccagctgacagccatagacaagtggttcctccat
aaactccataggataacacagctagagcaacacttggcaaactacaagagtggcacagta
cccagggggctgctgcttaaggccaagcaggatggtttttcagaccggcaggttggtcag
attctgggctccagtgagagagtagccagagaactgaggctcactcaaagtatcagaccc
tgggtcaaacagattgacaccctggcagcagagtacccagctatgaccaactacctgtat
tgtacttatcatggtcaggagcatgatctggactttaaagaccagggaattatggttctt
ggttgtgggccttaccatattgggagcagtgttgagtttgactggtgtgcagtgtctagc
atcagagccttgagacagatgggcaagaagacagtggtggtgaaccacaaccctgagaca
gtcagcactgactttgacgagtgtgatcgcctttatttcgaagagctgaccctggaacgc
atcctggacatcacccagcaagagggttgctctggcagcattgtgtcagtgggaggccag
atccccaacaatctggccgtcccgttgcacctgagcggagtgaagattctcgggacaaac
cccctgcagattgaccgggctgaggagcgctctatcttctccagtgtcctagatgacctc
ggagtggcccaagccccatggagggcccttagttctctggaagatgcctttgcgtttgcc
aaccaggtcggctatccctgtcttctccgcccctcctatgttctcagtggctctgcaatg
aatgttgtgtacggagaagaggaaatgaaacgtttcttggaggaggccacccaggtgtcc
caggagcacccagtggttatcaccaagttcatccgtggggccagggaggttgaagtggat
gctgtggccaagtctggcaaggttctggtccatgccataacagagcatgtggaggacgct
ggggtacactcaggagatgccactctaatgctgccaacccaaactattagccagggggca
ctagaaaaggttaaggctgccacccgcaaaattgcacaagcatttgaaatttctgggccc
tttaacactcagtttctggttaagggcaatgatgtcatggtgatagagtgtaatctgcgg
gcgtcacgctctttcccttttgtatcaaaaacaatcggcgtagactttatcaatgtggca
accaaagtcatggtgggagagcctttggatgaggacagcctgccctcgctggagaaaccc
atcattcctgtagactatgtgggcatcaaggcgcccatgttctcctggccacggctgagg
gatgcagatcctgtacttcgctgtgagatggcctccactggggaggtagcttgttttgga
ccaaacatttattcagccttcctgaaagctatgctctccacaggcttcaaactgccacag
aagggcatcctgattgggattcagcattcattccgacccaatttcctggccacagcacac
caactgaaagaggagggcttcaagctctatgccactgaagccacttctgcctggctgtgc
gccaatgatgtgcctgccacaccagtagcctggcccagtgagaagggagaagacaacagt
ttgcctagtattaacagactgatcaatgagggtcatattgaccttgtggtcaacttgccc
aataataacactcgccacctgagggataacttcctcatccgcagaatggctgtcgaccac
ggtgttcctctcatcaccaactaccaggtggtgaagttgtttgtggaagctatccactat
gcaggtgagctcgacactaccagcctcttccactaccggcagaaagagagccaacaaaga
ggtgctagccagcagagctaa
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