Lates calcarifer (barramundi perch): 108892781
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Entry
108892781 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: thyroglobulin-like
KO
K10809
thyroglobulin
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Thyroglobulin_1
Ephrin_rec_like
PAN_1
PAN_4
PAN_3
TNFR_ELAPOR1_6th
Motif
Other DBs
NCBI-GeneID:
108892781
NCBI-ProteinID:
XP_050924086
UniProt:
A0AAJ8DMD2
LinkDB
All DBs
Position
Unknown
AA seq
2444 aa
AA seq
DB search
MDLRAYQLESETLSRCELLRGVAVARQQGGIPHCTEDGRFRPVQCSGRGQECWCVDGEGQ
EVVGTRTNSSAPHCPSPCQLQSVLRCSPSGLFESVQCDSSRGQCWCVDQDGMELYGTRQA
GRPHRCPGSCEVRERRLLHGSGSPSPPQCAADGSFLPVQCKFINVTDRAELDLLHAFNRF
PEAFETFSSFRKFFPMVSSYCFCSDSRGRELENTGVELLLSEVYDSAFSGLRSGRSFSQT
NIYRVLQRRMLGVRLALTGHFRCPSPCEEEQRAATEASSVFVPSCESGGAFTSRQCQRGG
QCWCVDPTGRELPGTRQHGDSLVCSSGLDCPSQRRLALSQLFSGPVDPPLLRSSSGRSSA
SCLSLLRPLRDVLPAEADPTSFLSRLVEVLHGLFPSVGGALQALSRSSPRRLQENLFGGK
FLKNAAAFNLSGAVGARGALGLEQLSSQTIILQKNRDLVQSVSRALEDPGFLSALQHTLT
GLSSSHSTSVDQVLTPLLRSCSAEEDEDEAAIFVPSCTSSGAFQEVQCQGAECWCVDPQG
LEVAGSRTSGRRPRCPSRCERERATALRVKGNMAAGAEIHVPVCSEDGDFLPLQCVGSRC
FCVDAEGKTMTTVPTGGAITCPERRTQKLQASTGGCSQVLSEVTAFREQVRSVVALSNSS
HLPLGYGFLLAEGLRLTPEELQISQSDEEMLLSDWLLSRSNTALRLAAFSTVQMFLPPRR
RSYQPFTPQCDADGNWLHTQCYHSTGQCWCVDEDGQYVSDSLTSRSLSPPQCLTRCQRAQ
AHTLLSGWTKGSDITTSPYHPTCEEDGRFSVLQTGGAAGWCVNPSTGETIQTATRSAAGQ
LTCTHTHTHTHTHTHTHTHTHTPFEFQPQCPAARQRPSEVTAGPSWCELQGLQCRPDGSF
VPLQCDVTSCWCVSVDGQEVGGTRTPRQTGRTPSCDRPLCPDPVVTHGALLCRPATDGRQ
NCDLVCHRGYQNSLPVSSFLCETESRRWDGDRPLSAACQISQPLQSVSFSQLWSLASSCS
QISSLQSLLFSSMTSRGLCSAQLPSSRRSVSLCDDSSVRLQCDGDESLKLTVKWSAALSD
LPTSDLPDLHDISLFLNQSRLLEGVQGLLGNIRSSLTSEPKLVSVMMPSFGCSRGYRLAG
DGDGCVVCPAGSLSREGACLLCPQGTYQNEEGRDFCNRCPRGSSPAGASSVDQCVTECQR
RGLRCSERGDFLSAQPDFLSGRWRCVSSEGAELEWTSSDRALTDEECSVLSRFQAVPGSD
LIVGAEDTDVLQTMTSDLRTCVQACAAEPSCHHVALFNRQTQCELYSTHTLNTHCNTSQQ
TRGFLGNPQAELFDWLSCSVRVRGGASDLLVIRKKGAEFPSQRQQQRSFVRMRMTKVVSG
VVRTQVFSGRTSLSDAHRFCQDGCSRDACCRGFILNQNSLNGGSLLCGWLRAPSVLMCGD
QDWDVIGQGAANRICGAGLTYNEQQRSFVFDFGGQEFTITDSNLPDDTKNKKDYQASIVS
FQAVYLNTGADSAVGSAPSCAAAELRPPVDDSVQQKFESVSDDDVLVDPQRKLSTLSFWL
NKKNYDSQQALLWCLSRCEAEPLCSVVDLRDAVDPSGFFSCSLFPDSRVCGAYDKPLRRA
CRLLLDRAPNNTYSKKMDLSGPVKSFYQRVSFQKMVSYSVRSRVGLRETTQLSEGFMECE
RRCDEDPCCRGIGFVRDTKSPGGSGVVCLTLISLGVQTCGEDDSTTWRTQDCRPSVVKTT
PDPFGWYQKPVNQWTTSPALCPPFTLTPPPTNVSLDEWRLLSDSSVLVDPSVSTYDVIHI
SRDITTDRDRTRDWCLHACQEAESCVAVSLSEAESATRCILYPDTTACGLSSAPSSSKHT
SSCRLVIREPAPQVYLRIERSPSVTTVSIPGHGILRGVAVETALSSDRRTVVQFLGVPYA
RPPIGSLRFEEAQPADWSGTWDATKPRPSCIQPGDVESAASSEDCLYLNIFTPAAQRGRV
PVLVFFFNPSANQNPGLLDGSTLAAVGNIVVVTANYRVAALGFLSTGDSGLRGNYGLSDQ
EAVLRWVHAHISLVGGDNSRVTVGAERGGADITSLHLLSSSSSPPLFQRMMLMGGSVFSP
SLVQTPSSSRRQADDLAKELGCVTSDLAACLRATPVHTLNAAQTKLLAVSGPFRSWSPVR
QSVSQSSFHRVDLLLGTTEQDGLIGRARRIKDFEALQGRADGKTAFYEALSRSLGGEKGN
DLLKEAASWFYSLDHSPSPAGYNLFSRALNNATRDLFIVCPTLQMANHWANSNANVFLYH
LPATSAQNRADVFVPLDVQLVFGTPHHPISSQRFTSSDRRLSLAMMTYVSSFVRTGNPNP
SRAWEESVLPRWQLVRSSEATPIYLELSPALLHHQGLSQRSCSFWTHLGPRLTSSTGERT
LQSPLYCYMLYIVKSEYVIKKKKRVRKCHRSTSFPPAAVRLWTQ
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagagcgtatcagctggagtcagagaccctgagccgatgtgagttgctaagg
ggcgtggctgttgccaggcaacaaggtggcatccctcactgtacagaggatggcaggttc
agacctgtgcagtgcagtgggcggggtcaggagtgttggtgtgtcgacggtgaaggtcag
gaggtcgtcgggactcggaccaacagctctgctcctcactgtccgtctccctgccagctg
cagtcggtcctgcgttgttctccttcaggcctctttgagtcagttcagtgtgactccagc
agggggcagtgttggtgtgtggatcaggacggcatggagctctacgggacccgacaggcc
gggagacctcatcgctgtcctggcagctgcgaggtgagggagaggcggctcctccacggc
tccggctctccgtctcctcctcagtgtgcagcagacggcagcttcctccctgttcagtgt
aaattcatcaacgtgaccgacagagcagagctggacctgctgcacgctttcaacaggttc
ccagaagcctttgagacattcagcagcttcaggaagtttttcccgatggtttcctcgtac
tgtttctgctcagacagccgaggccgagagctggagaacacaggtgtggagctcctcctg
tccgaggtgtacgactctgcgttctccggtcttcggtccggtcgctccttctctcagacc
aacatctacagagtcctgcagaggaggatgctgggagtccgcctcgccctcaccggacac
ttcagatgtccgtctccctgtgaggaggagcagcgggcggcgacagaggcgtccagtgtt
ttcgtcccgtcctgtgagagcggaggagccttcacctccagacagtgtcagcgggggggg
cagtgctggtgtgtcgaccccacgggaagagagcttcctgggacacgacagcacggagac
tccctggtctgcagttcaggtctggactgtccctctcagcgtcgtctggctctgtcccag
ctcttctctggtcctgttgaccctcctctcctcagatcctcctctggcagatcttcggcc
tcctgtctctccctcctccggcctctcagggacgtcctgccggcggaggcagatccgacc
tccttcctgtctcgcctggtcgaagtcctccacggtctgttcccctcggtgggcggggct
ctgcaggctctgtctcgctcctccccccgtcgcctccaggagaacctgttcggagggaag
ttcctgaagaacgccgccgcctttaacctgagcggggcggtgggagctcgaggagctctg
ggtctggagcaactctcctctcagacgatcatcctccagaagaaccgggacctggtccag
tccgtcagcagggccctggaggacccgggcttcctgtccgccctccaacacacactgacg
gggctcagcagctcacactccacctcagtggatcaggtcctgactccgctgcttcgctcc
tgctctgctgaggaggacgaggacgaggcggccatctttgtccccagctgcacgtccagc
ggtgctttccaggaggtccagtgtcagggggcagagtgctggtgtgtggatcctcagggt
ctggaggtggcggggtcgcggacctccggtcgtcggcctcgctgtccgtcccgctgcgag
agggagcgagcgacggcgctgagggtgaagggaaacatggcggccggagctgagatccac
gtccccgtgtgctcggaggacggagacttcctgccgctgcagtgcgtcggctcacgctgc
ttctgtgtcgacgcagagggaaaaacaatgaccaccgtaccaacagggggcgccatcacc
tgtccagagagacgaacacagaagctccaggcctccacaggtggctgctctcaggtgttg
tctgaggtcacagcgttcagagagcaggtgaggagcgtcgtcgctctctcgaactcctct
caccttcctctgggatacgggttcctcctggctgaaggtctgcgtctgaccccagaggag
cttcagatcagccaatcagacgaggagatgctgctttctgattggctgctgagccgatcc
aacactgctctgcgattggctgcgttctccaccgtccagatgttcctgcctcctcggcgt
cggtcgtatcagccgttcactccacagtgtgacgctgatggaaactggctgcacacacag
tgttaccacagcacaggtcagtgttggtgtgttgatgaagatggacagtacgtctctgac
tctctgaccagccgctcactcagcccgccccagtgtctgactcgctgtcagagagctcag
gctcacactctgctctctggttggacgaaaggctctgacatcaccacctcaccttaccac
ccaacctgtgaggaggacggtcgtttctctgtgctgcagacaggaggcgctgcaggctgg
tgtgtcaatccctcaactggagagaccatccagacggcaacacggagcgccgcaggacag
ctgacatgtacacacacacacacacacacacacacacacacacacacacacacacacaca
cacaccccgtttgagttccagccacagtgccctgcagcaaggcagcggccctcagaggta
acagcaggtcccagctggtgtgagcttcagggtctccagtgtcgccccgacggctccttt
gtcccactgcagtgtgatgtcacttcctgttggtgtgtctctgtggacggacaggaagtg
ggcgggaccaggacgccccgacagacgggacggacgccgtcatgtgatcgtcccctctgt
cccgaccctgtcgttacccacggtgcactgctctgccgcccggccactgatggtcgtcag
aactgtgatctcgtgtgtcaccgtggttaccagaactcacttcctgtcagcagcttcctg
tgtgagactgagagtcggcgatgggacggagacagaccgctgagtgcagcctgtcagatc
tctcagcctctacagtcggtgtcgttctctcagctctggtcattggcgtcgtcctgttct
cagatcagcagtttacagtcgctgttgttcagctccatgaccagcagggggctctgctct
gcacagcttccgtcgtcgcgtcgctccgtgtcgctgtgcgacgactcgtcagtgcgtctg
cagtgtgacggcgacgagtcgctgaagttaacggtgaaatggagcgccgccctctctgac
ctcccgacctctgacctccctgacctccatgacatcagtctgttcctgaaccagtccaga
ctcctggaaggagttcagggacttctgggtaatatccggtcctcgctcacctcagagccc
aaactggtttctgtgatgatgccaagcttcggctgttcccgtggttaccgcctggctggt
gacggcgacggctgcgtcgtttgtcctgctgggagtttgtccagagagggggcgtgtctc
ctctgtcctcagggaacctatcagaatgaagaggggcgggacttctgcaacaggtgtccc
agaggttcctcacctgccggagcctcgtctgtcgatcagtgtgtgactgagtgtcagagg
cggggtctgcggtgttcagagcgaggcgacttcctgtcagcgcagcctgacttcctgtcc
ggcaggtggaggtgtgtcagcagtgagggggcggagcttgagtggaccagcagcgacaga
gctctgactgatgaggagtgctcagtcctcagcaggtttcaggctgttcctggatcagat
ctgattgttggagctgaagacactgacgtcctgcagacgatgacctctgacctcagaacc
tgtgtccaagcgtgtgcagcggagccgtcctgccaccatgtggcgctgttcaacagacag
actcagtgtgaactgtacagcacacacacactgaacacacactgcaacacctcccagcag
accagggggtttctgggtaatcctcaggccgagctctttgattggctgagctgctctgtg
agagtgaggggcggagcgtcagacctgctggtcatcaggaagaaaggggcggagtttccc
tcgcagcggcagcagcagcgcagcttcgtgaggatgaggatgacgaaggtggtctcaggt
gtggtcaggactcaggtgttctctgggcggacctctctgtccgacgctcatcgtttctgt
caggacggctgcagccgcgacgcctgctgccgcgggttcatcctcaaccagaacagcctg
aacggaggttccctgctctgcggttggctgagagctccgtcggtcctgatgtgcggcgac
caggactgggacgtgattggacagggagcggccaatcggatctgtggggcggggctaacc
tacaacgagcagcagaggagcttcgtgtttgactttggaggacaggagttcaccatcact
gattctaatctgcccgacgacaccaagaacaagaaggactaccaggcctccatcgtcagc
ttccaggccgtctacctgaacacaggtgcagactcagcagtgggttcagctccttcctgt
gcagcagcagagctccgccctcctgtggacgactcggtgcagcagaagtttgagtccgtg
tcagacgacgacgtcctcgtggatcctcagaggaaactctccactctgtccttctggctc
aacaagaagaactacgactcccagcaggcactgctgtggtgtctctcacgctgcgaggcg
gagccgctctgctccgtcgtcgacctcagagacgccgtcgacccgtcgggtttcttcagc
tgctcgttgtttcccgacagcagagtgtgcggagcgtacgacaaacctctgagacgagcc
tgtcgcctcctgctggacagagcgccaaacaacacctacagcaagaagatggatctgtct
ggaccagtgaagagtttctatcagagagtttccttccagaagatggtttcttactctgtt
cgcagccgagtcggtctgagagaaaccacacagctgtctgaggggttcatggagtgtgag
cggcgttgtgatgaggatccttgctgccgtggtatcggcttcgtcagagacacaaaatca
ccaggtggttcaggtgtggtgtgtctgactctgatcagtctcggggttcagacctgcggt
gaagacgactcgacgacctggaggactcaggactgcagaccgtctgtggtgaagaccaca
ccggacccgttcggctggtaccagaaacctgtgaatcagtggacgacttctcctgctctc
tgtcctccattcaccctgacccccccccccaccaacgtgtctctggacgagtggcgtctc
ctttccgactcgtccgtcctcgtcgacccgtctgtctctacgtatgatgtcatccacatc
agccgtgacatcaccaccgaccgggacaggaccagggactggtgtctccatgcctgccag
gaggcggagtcttgtgtcgctgtgtcgctcagtgaggcggagtccgccacccgctgcatc
ctctaccccgacaccacagcttgtggactaagctccgcccccagttcctccaaacacacc
tcctcctgcaggctggtcatcagagagcccgccccccaggtgtacctgaggatagagcgg
tcgccgtcggttacgactgtctccatcccgggtcacgggatcctgcggggcgttgccgtg
gaaacagccctgagctcagaccggaggacggtcgttcagtttctgggagtcccgtacgca
cggccaccaataggatcgctccgctttgaagaggctcagccggctgattggtcgggaacc
tgggacgccaccaaaccacggcccagctgtatccagcctggtgatgtagagtctgcagcc
tccagcgaggactgtctctacctgaacatcttcactcctgctgctcagagggggcgtgtc
ccagtcctggtcttcttcttcaacccttcagccaatcagaacccaggactgctggatggc
tccaccctcgctgctgtgggtaatatcgtcgtggtaacggcaaactaccgggtcgcagcg
ctgggattcctgagcacaggtgactctggtctccgtggtaactacgggctgtcagaccag
gaggcggtgcttcgctgggttcacgcccacatctccctggtgggcggagacaacagcaga
gtgacagtgggggcggagcgtggtggtgctgacatcaccagccttcacctcctctcctcc
tcatcgtctcctcctctgttccagcgcatgatgctaatgggcggttcagtgttttctccg
tccctggtgcagactccctcctcctccagacgtcaggccgatgatttggccaaagagctt
ggctgtgtgacctctgacctcgccgcctgcctcagagcgacgcctgttcacacgctcaac
gctgctcagaccaagctgttggcagtcagcggtccgttccggtcctggtctccagtccgt
cagtcggtctcccagtcgtccttccacagagttgatctgctgctgggaacaacagagcag
gacgggctgatcggccgagctcgcaggataaaggactttgaggctcttcagggtcgagct
gacggtaaaacagcgttttatgaagctttgagtcgctcgctgggcggcgagaaaggaaac
gacctgctgaaggaggcggcgtcctggttctactctctggatcacagcccctcacctgcc
ggatacaacctgttctccagagcactcaacaacgccaccagagatctgttcatcgtctgt
cccactctgcagatggctaaccactgggctaacagcaacgctaacgtcttcctgtatcac
ctgcctgcaaccagtgctcagaacagggctgatgtgtttgttcctctggacgttcagctt
gtgttcggtactcctcatcatccaatcagctctcagcgtttcacctcctctgatcgacga
ctctctctggccatgatgacctacgtctccagcttcgtcaggaccgggaacccaaaccca
tcccgagcatgggaggagtcagttctgccccgctggcagctggtccggtcctctgaggcc
acacccatctatttggagctaagccccgccctcctccaccatcagggtctgagtcagaga
tcctgctccttctggacccacctgggacccagactgaccagttcaacaggtgagaggaca
ctgcagagtccactgtactgctacatgctgtacattgtaaagtcagagtatgtcattaaa
aaaaaaaaaagagttagaaaatgccacagatccacgtccttccctcctgctgctgtcaga
ctctggacccagtag
DBGET
integrated database retrieval system
