Lates calcarifer (barramundi perch): 108892840
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Entry
108892840 CDS
T04895
Name
(RefSeq) angio-associated migratory cell protein
KO
K24725
angio-associated migratory cell protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108892840
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108892840
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
eIF2A
WD40_like
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_IP5PC_F
PQQ_2
Beta-prop_RIG_1st
DUF4949
TFIIIC_delta
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
108892840
NCBI-ProteinID:
XP_018546108
UniProt:
A0AAJ7VC17
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Position
LG7_2:5769987..5774741
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AA seq
416 aa
AA seq
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MDNTEENAIEIHGDEEIIEVIDLNETEPGPDDLADDLEDVDFEDPGNADDEGWETEDEME
AEAEQDDSELTFSKHTGSVFCVSLDPATNSLAVTGGEDDKAYVWRVSDGEVVLECTGHKD
SVTCAMFSHDSSLVATGDMSGMIKVWRVETKEEIWSFEVGDLEWLEWHPCAPVLLAGTDD
GNVWMWKIPAGDCKTFQSPGCQATSGKVLPDGKRAVVGYEDGTVRVWDLKQGNAIHVVKG
QDGHQGALTCLACNKDGSLVLSGSVDGCAKLINTTTGKVVGAFSVEGGKAKGSRDDEDSN
SVESVGFCNILPLIAVAYLDGTLAIYDVSSQVLRHRCQHEAGIVHLQWEESSSVVSTCSL
DGALRLWDARSGNMVSEYRGHTAEILDFTINREASLAVTASGDNQGKVFCLQRPDR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggataacacggaggaaaacgcgattgagatccacggggatgaggaaattattgaagtc
atcgacctaaacgagacggagcctggtcctgatgacttggctgatgacctggaggacgtt
gactttgaagatcctggaaacgcagatgatgaaggctgggagacggaggacgagatggag
gcggaggcagagcaggatgacagcgagctcactttctccaaacacactggctctgtgttt
tgcgtgagtttggatcctgcgacgaacagcttggctgtaacaggaggagaagatgataag
gcctacgtgtggagggtcagtgacggggaggttgtgctggagtgcacaggtcacaaagac
tcggtgacatgtgccatgttcagccatgactcctcgctggtcgccacgggcgacatgagc
ggcatgattaaagtttggagggtggaaaccaaagaggagatctggtccttcgaagtgggc
gatctggagtggttggagtggcatccctgcgctccagtgctgctggcgggaacagacgac
ggcaatgtgtggatgtggaagatccctgcaggagactgtaaaaccttccagagtcctggg
tgccaggccaccagcggcaaagtcctgcccgacggtaaacgggctgtggtgggttacgag
gacgggacagtgcgagtgtgggacttgaagcagggcaatgccatccatgtcgtcaaaggt
caggacggacaccagggagcgctgacctgcctggcgtgcaacaaggacggctctctggtg
ctgtcggggtcagtggacggctgcgccaagctcatcaacaccaccacgggcaaggtggtt
ggagcgttctctgtggagggaggcaaagctaaaggatcgagagacgacgaagactccaac
tccgtggaatctgtgggtttctgcaacatcctgcctctcatagccgtggcgtacctcgat
gggactctggccatatacgacgtctcctcacaggtcctgaggcacaggtgccaacatgag
gccggtattgttcacctgcagtgggaggagtcttcttctgtggtgtccacctgcagttta
gacggagcgctgcgcttatgggacgctcgctctggtaacatggtgtctgagtaccgcggc
cacacagcagagatcctggactttaccatcaacagggaagcgtctctcgcagtcaccgcc
tcaggagacaaccaggggaaagtcttctgcctccaaagacccgaccggtaa
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