Lates calcarifer (barramundi perch): 108892843
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Entry
108892843 CDS
T04895
Symbol
si:ch211-132g1.1
Name
(RefSeq) T-cell surface antigen CD2
KO
K06449
T-cell surface glycoprotein CD2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108892843 (si:ch211-132g1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108892843 (si:ch211-132g1.1)
04515 Cell adhesion molecules [BR:
lcf04515
]
108892843 (si:ch211-132g1.1)
04090 CD molecules [BR:
lcf04090
]
108892843 (si:ch211-132g1.1)
04091 Lectins [BR:
lcf04091
]
108892843 (si:ch211-132g1.1)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108892843 (si:ch211-132g1.1)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
SLAM/CD2 family
108892843 (si:ch211-132g1.1)
CD molecules [BR:
lcf04090
]
Proteins
108892843 (si:ch211-132g1.1)
Lectins [BR:
lcf04091
]
I-type lectins (Siglecs)
108892843 (si:ch211-132g1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Orthoreo_P10
I-set
Ig_2
TMEM51
Protocadherin
WBP-1
DAG1
TMEM154
ASFV_J13L
C1-set
SARAF
Peptidase_S49_N
Ctr
V-set
Zip
Motif
Other DBs
NCBI-GeneID:
108892843
NCBI-ProteinID:
XP_018546111
UniProt:
A0AAJ7Q3V0
LinkDB
All DBs
Position
LG7_2:6047443..6068142
Genome browser
AA seq
367 aa
AA seq
DB search
MVRMKMAAVSRITLLLFCCSVISSTDSADACEEYGATGGNFTVKLNHKLQPTQKLRWKHN
TRVILDRKPPKDGETGHRFSQGAVKDILSDGSLKLENLNKTYEGQYTPEVFNADGTSVKK
LKSVYLCVLDPVKKPVLQQKCAKSESVEFICNVDEPKDVTVQWLQNDNPTDGGKKSLKRQ
ANKVEKDFFRCNVSNRVSSMISDAVKQECIKSSFPEEIMGISIWVFVGGGGGVVLVLIII
VIVCCVQAKRKKRMRLKDEEELRLGCFNPDQQQQQQHQHHRHQHHHPPDYHHHHQQQPAG
HTGPRQHRPKQHREHQQRPRAPDLPNGHPQPSPRRPAQNPRPDVSNDEEQPPPLPQPRKK
APRTPKQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggatgaagatggctgctgtttctagaatcactctgcttctgttctgctgctcc
gtcatctcctccacagattctgcagatgcttgcgaagaatatggcgcaacaggaggtaac
tttacagtgaagctgaaccacaaactgcaacccacccaaaaactgagatggaagcataac
actagagtaatcctggatcgaaaaccaccgaaggatggagaaacaggtcacaggttttcc
caaggggctgtgaaggatattctttcagatggatccctgaagctggaaaatctaaataaa
acttacgaagggcaatacaccccggaggtttttaatgctgatggaacatcagtaaaaaaa
ttgaagagcgtatatttatgtgtattggaccctgtcaagaaacctgtattgcagcaaaaa
tgtgccaaatctgaatctgtcgaatttatctgcaatgtcgatgagcccaaggatgtcacc
gtgcagtggcttcagaatgacaatccaacagatggaggaaaaaaaagtctgaaacgacaa
gccaacaaggtggagaaagatttcttccgctgcaatgtttccaaccgtgtcagttcaatg
atcagtgacgctgtaaaacaagagtgcatcaagtccagtttccctgaagaaataatggga
attagtatctgggtttttgtcggcggtggaggaggtgttgttcttgtgctgattatcatc
gtcattgtttgctgcgtccaggccaaacggaaaaaacgcatgcggctgaaggatgaggag
gagcttcgtttgggatgcttcaatcctgatcaacagcaacaacaacaacatcagcatcat
cgtcatcagcatcatcatcctccagattatcatcaccaccaccagcagcagccggccggc
cacaccggtcctcgccagcatcgccccaaacagcatcgcgagcaccagcagcgtcccaga
gcccccgacctccccaacggtcaccctcagcccagccccaggagacctgcacagaacccc
agaccagatgttagcaatgatgaggagcagcctcctcctcttcctcagcccaggaagaaa
gctcccagaacaccaaaacagtga
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