Lates calcarifer (barramundi perch): 108892898
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Entry
108892898 CDS
T04895
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04136
Autophagy - other
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108892898
04136 Autophagy - other
108892898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108892898
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108892898
Membrane trafficking [BR:
lcf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108892898
Atg1 complex
108892898
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108892898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
108892898
NCBI-ProteinID:
XP_018546186
UniProt:
A0A4W6EXG7
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All DBs
Position
LG7_2:complement(6296625..6304449)
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AA seq
541 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPCSSQRPANMGQPCNYRAPDEE
DGGPFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHTL
YTSRLSYQPPALAGAADLCHPAANPNQALHAGKEGGVVLVPAHPPHGTDAHLTVEHAPNT
PGSSGDDDGLSQSGEGRRDEGRRSVSPSDPVESLNAFTRKVGAFVNKPSTQITAASLDLP
FAAFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKD
DLLPMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDML
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctaagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttgaagactgtccaggtgatagtccaagcccgtcttggggagaaaatctgcactcgc
tcttcctcatcacctacaggctctgactggtttaacttggccatcaaagacatcccagag
gtgactcatgaagccaagaaagcactggctggccaactcccaggcatcggacgctccatg
tgtgtcgagatctccctgaagacgtcagagggtgactcaatggagctggagacttggtgc
ctggagatgaatgaaaagtgtgataaggacatcaaggtgtcatatacagtgtacaaccgt
ctgtctgtccttctgaagtctctgctcgccatcaccagagtaacacctgcctataaactg
tccagaaagcaggggcacgactatgtcatactatacaggatctactttggggaagtccag
ctgagtggattaggggaaggttttcagacagtgcgtgtcggtgttgttggcacccctgtc
ggcacagtcacactttcatgtgcctaccgcaccaacctggcattcatgtcaaacaggcag
tttgagcgttcagctcccatcatggggatcattgtggatcactttgtggatcctccctgc
agcagccagcgtcctgccaatatgggacagccctgcaactacagagctccagatgaggag
gacggaggaccatttgcaggagttcaggattcacaggaggtctgcaccacctccttctcc
acctcccctccttctcagtgtgtctgtacactgagtccgtctccctctaaactgtctaag
cccctccccctggacagtctacagcttccattggctcctggacttgtcactcacactctg
tacacctccaggttatcctaccagcctccagctctagcaggagctgctgatctttgtcac
cctgctgccaatccaaaccaggcgttgcatgctggaaaggagggtggggtcgtgttggtt
cctgcccatcctcctcatggaacagatgctcatctgacagtagagcacgcccccaacaca
cctggcagcagcggcgacgatgacggtctgtcacagagtggagaaggaaggagggatgaa
gggaggaggagtgtttctccctctgacccggtggagtctctcaatgcattcactaggaaa
gtcggagcctttgtcaataaacccagcacacagataacagcagccagtctggacctgccg
tttgctgcatttgctcctcgaggcctggactcagaggagaatgatcccatggtacagcct
ccagactcccctccctgcccgtcccccctgcaggccagcctgcactctcagggctcagag
ggatcagggcagcaggacgatttcgtcatggtcgactttcgacccgccttctctaaagat
gacttgttgccgatggatttgggcaccttctacagagagtttcagaatcctccacagctc
gccagcctctcactacacatcagctcccagtcaatggctgatgacctggactcgctgcca
gagaaactggccgtctatgagaagaacatcgacgagtttgatgcctttgtggacatgctc
cagtaa
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