Lates calcarifer (barramundi perch): 108892903
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Entry
108892903 CDS
T04895
Name
(RefSeq) la-related protein 7
KO
K15191
La-related protein 7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108892903
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
108892903
SSDB
Ortholog
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GFIT
Motif
Pfam:
RRM_3
La
RRM_1
RRM_10
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
108892903
NCBI-ProteinID:
XP_018546199
UniProt:
A0A4W6EGR8
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All DBs
Position
LG15:19169976..19175241
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AA seq
566 aa
AA seq
DB search
MIDTERGTDDTGAAEPSSKTKETEKKKRSRVKQLLGDVKKQVEFWFGDVNLHKDRFLRKL
IDESDDGYVDISVLASFNRMKKLTTDTKLIARALKNSSVVEVNLEGNKVRRQLPVGDIPN
DTDSRTVYVELLPKDVTHSWIERVFTKCGNVVYVSIPRYKSSGDSKGFAFVEFEKEEQAQ
KAIEMLNNPPEDAPRKPGIFPKTKSRKPLPLPADNPPSGEEEEKKKKKKKKKKESSAAPV
AAEEAKEQAMDAEPSEHKRKHQAVGDFEPDIASAQKTLGKLSEKKRRRSQTVEGSESDIP
SKIRKTSESESGEKKDAAKTDQSTENDTERLVEEGKENRDDSTVKAKRKRKKKHKEKLKI
GEEVIPLRVLSKKEWLELKEEYLTLQKRSMASLKKCISKIDHKEHKSLMETETDAQDGNT
EKSNKSEKAANQGPQFTSGVIMKITDNKPLPGRKILKDALCKISPVAYIDILEGDAEGHI
RFHTPEDAKAVSDVRAELQKEHSWKLEILSGDHEQRYWQKILVDRQVKLNRPREKKRGTE
KLISKAEKIIIARAKEANKHIRFQED
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgattgacacagagaggggaactgatgatactggtgctgcagagcccagcagtaagacc
aaagagacagaaaagaagaaacggtctcgagtcaaacagctgctgggtgatgtgaagaag
caggtggagttctggtttggagatgtcaaccttcacaaggaccgctttctgagaaaactc
atagatgagtcagatgatggatatgttgacatatctgtgttggcgagcttcaatcgaatg
aagaagctgacaactgacactaagctgattgcgagggcgctgaaaaattcatctgtagtt
gaggtgaacttggaaggcaataaagtacggcgtcagcttccagttggagacataccaaat
gatacagacagccgcacagtctatgtggaacttttgcccaaggatgtgactcacagctgg
atagaaagagtcttcacaaaatgtgggaatgtggtttatgtcagcatccccagatacaag
tcttcaggtgactccaagggttttgcgtttgttgagtttgagaaggaggaacaagcacag
aaagccatagagatgctgaataacccccctgaagatgctccaaggaaaccagggattttc
cccaagacgaaaagtaggaagcctcttcctctgccagctgacaatccaccatcaggtgaa
gaagaggagaagaaaaagaaaaagaagaaaaaaaagaaagaaagttcagcagcaccagtg
gctgcagaagaagccaaagagcaggcgatggatgcagagccatcagagcacaagaggaag
caccaggcagtgggggattttgaaccagacatagccagtgctcagaagacgctgggcaaa
ttgtcagagaaaaaaagacgaaggtcacaaacagtagaaggctcagaaagtgacataccg
tctaagataagaaaaaccagtgaaagtgaatctggagaaaaaaaggatgcagcaaagact
gatcagtccactgaaaatgacacagagagacttgtggaggaagggaaagaaaacagggat
gattcaacagttaaagcaaagaggaagagaaagaagaaacacaaagaaaaactgaaaatt
ggtgaagaggtcatcccactacgagttctatcaaagaaagagtggcttgagctgaaggag
gagtatttgaccttgcagaagcgcagcatggcgtccctgaagaagtgtatcagtaagatt
gatcacaaggagcacaagagtctcatggagacggagactgatgctcaagatggaaacact
gagaagagtaacaaaagtgaaaaagcagctaaccagggccctcagtttaccagtggtgtc
atcatgaagattacagacaacaagccactaccagggaggaagatccttaaggatgccttg
tgcaaaatatcaccagtggcgtacattgacatcttggagggagatgctgagggtcacatc
cgctttcacaccccagaggacgctaaagccgttagtgacgtcagagcagagctacagaaa
gaacatagctggaaacttgaaattctctcaggtgaccatgaacaaaggtactggcagaag
atcctagtggaccgccaggtcaagttgaatcgtccgagagaaaagaagcgtggtacagag
aagctcatatccaaagcagaaaaaatcatcattgcccgggccaaggaggctaataaacac
atccgtttccaagaggactga
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