Lates calcarifer (barramundi perch): 108893066
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Entry
108893066 CDS
T04895
Name
(RefSeq) rho GTPase-activating protein 10 isoform X1
KO
K13736
Rho GTPase-activating protein 10
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108893066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108893066
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108893066
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BAR_3
RhoGAP
SH3_9
PH
SH3_1
SH3_2
Arfaptin
IMD
BAG
Motif
Other DBs
NCBI-GeneID:
108893066
NCBI-ProteinID:
XP_018546383
UniProt:
A0A4W6ETL0
LinkDB
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Position
LG5:7076841..7122315
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AA seq
766 aa
AA seq
DB search
MGLHPLEFSECYLDSPSFRDKIKAHEAELDKTNRFIKELYKDGKNLINATKQLGMAQRKF
AQCLGEFQFEYIGDAKTDDEKCIDESLQEFSSFLKNLEDQRELMMRNITETLMKPLEKFR
KEHLGTVRAERKRYEKETEKYYSSLEKLLNMSARKKEPQLQEADIQVETMRQHFQEESLD
YVCKLQEIQERKKFECVEPMLAFFQTVFTFYHQGFELAKDFDHYKRALQINIQNTRNRFE
GARSEVYELMKRIREAPQEYRQTSPISCEGYLYVQEKRPPPFGSSWVKRYCTFVKEQKIL
HMVTFDHRSGGKIGETESVTLKSCLRKTTDMLDRRFCLDLDITDRPGTVLTVQALSEDDH
KFWMQAMGGKEPIGHYLGRTLSKERGIDAQLDDVGLSFVKNSISAIETRGINDQGLYRVV
GVSSKVQKLLSLMIDEKSNEVDLSASEDWDVKTITSALKLYLRSLPEPLMTYGLYKEFIS
PAKGGSPESRIQAVHCLVHKLPERNRQVLGLLMKHLANVAAHSKQNLMTVANLGVVFGPT
LMRPQEETVAAIMDLKFQNIVVEILIEHHEKIFADAPESCPLSPAAPVFSAPTRQSKKLS
RQNRPLAVYNPQALDIQNAVADSSSLATDETSMGSNESVSSQSSSASTSETPAEKSDHAP
LNISLSSGSNSGAAAASWSTPGASAESGESQPAATTTASDKEKSEESVTSRKAKAVYPCE
AEHDSELSFQVGAIFNAVTQSREPGWLEGELEGKRGLIPENYVEML
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgggactacacccgctggagtttagtgagtgctatctggacagccccagcttcagggac
aaaataaaggcacacgaagcagagctggacaaaactaacaggtttatcaaagagctgtac
aaggatgggaagaacctcatcaatgcaactaagcaacttgggatggcacagcgaaagttt
gcccagtgcctgggagagtttcagtttgagtacattggagatgcaaagacggatgatgag
aagtgtattgatgagtctttgcaagagttctcctcattcctcaaaaacctagaagaccaa
agagaactgatgatgagaaacatcacagaaactttaatgaaacccctggagaagttcagg
aaagagcatctcggtacagtaagggcggaaagaaagaggtatgagaaagagacagagaaa
tactacagctctctggaaaagcttctgaatatgtcagcaaggaagaaagaaccccaacta
caagaggcagacatccaggtggaaaccatgaggcagcactttcaggaggagtcactggac
tatgtgtgcaaactgcaggagatccaagagagaaagaagtttgagtgtgtggagccgatg
ctggccttcttccagacagtcttcactttctatcatcaaggcttcgagcttgccaaggac
tttgatcattataaaagagcactgcagatcaatattcagaatacaaggaatcgatttgag
ggcgcacggtcagaggtgtacgagctgatgaagaggatcagggaggcaccccaagaatat
agacagaccagccctatcagttgtgagggctacctctacgtacaggaaaaacggccacct
ccctttggttcaagttgggtcaaacgctactgcacatttgtcaaagagcagaagatcctg
cacatggtgacctttgaccacagatctggtgggaagattggtgagacagagtctgtcacg
ttgaaatcctgtctccgcaaaacaactgacatgttggataggaggttctgcttagatctt
gacataactgatcggccggggacggtgctaacagtacaggccctgtcagaggatgaccat
aagttctggatgcaggccatgggtgggaaggaacctattggacactaccttgggagaact
ctttctaaagaaagaggaattgatgcccagctggatgatgtgggtttaagttttgtgaag
aactccatcagcgccattgagaccagaggtattaatgatcaaggcctgtacagagttgtt
ggggtgagctccaaggtccagaagcttctctcgttaatgattgatgagaagagcaatgaa
gtggatctgtctgccagtgaggactgggatgtaaagacaataacaagtgcactgaagctt
tatctaaggagcctccctgagccactgatgacctatggactttacaaggagttcatcagc
cctgcgaagggtggtagtccagagtctcgtatccaagccgtccactgcctggtccacaaa
ctaccggagaggaatcgacaagtcctcgggctgcttatgaagcatctggccaatgtggcg
gcccacagcaaacagaatctgatgactgtggccaacctgggcgtggtgtttggccccaca
ttaatgaggccacaggaggagactgttgctgccatcatggatctcaagttccagaacatt
gtggtggaaatcctcattgaacaccatgaaaagatctttgcagatgctcccgagtcatgc
cctctttcacctgctgccccagtattctccgctcccacaaggcagtccaagaagctgagt
cgacagaatcggcccctggctgtctacaatccacaagccctagacattcagaatgcagtt
gcagatagctccagtctagctacagatgagacatcaatgggcagcaatgagtctgtatcg
tcccagtcttcatcagcgtcgacctcagagacgcctgcagagaagagtgaccatgccccg
ctgaacatcagcctcagctcaggcagcaactctggagctgcagcagcttcgtggtccact
cctggagcatcagcagagagtggagagagccagcctgctgccaccacaactgcctcagat
aaagaaaaatcagaggagagtgtcaccagcaggaaagccaaggcagtgtacccatgtgag
gctgagcacgactctgagctctccttccaggtcggcgcaatattcaacgccgtgacccag
tcgagagagccgggctggctagagggggagctggagggaaagaggggcctcatccctgaa
aactatgtggagatgctgtag
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