Lates calcarifer (barramundi perch): 108893072
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Entry
108893072 CDS
T04895
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
108893072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
108893072
NCBI-ProteinID:
XP_018546390
UniProt:
A0AAJ7VCD1
LinkDB
All DBs
Position
LG5:complement(6566487..6595543)
Genome browser
AA seq
3143 aa
AA seq
DB search
MAGCLQSWQLCKKWAFLRCLLVTFSLSFCFASLDAEPFDPTHLYHHRSGPNEDNIIIANN
GIRVPFGRSVYLDPVNDLITEVQPGDRCHITVLDNDPLAQKPGMLTPKKFPCSFGPDEVK
YTHFGSRSPSKDRVKLQLRYDSQTDTVIIPFMLEVEVVFQQLEILTRNMPLNVEKLNGDS
HPIDKKSLEFSFEDGVTQCKITTLVGAGGLPRYGTLLNNPTNGQMVDCDEFVKQGIRYKH
TAKTNSPNRDYVPMMVELQDNEGNTIMQEHFQMMVRIREGAENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDVESDLDDLIFNITSPLSPQQGYIISTDDQNLPITSFYQRDIKDLK
IAYKPPSEDSEVERIFQLELEIVDTDGAVSDTFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSSQNLEISDEDNLEDVRITVVDGLKHGELTVLGARRKFFTPADLDAGIVVYQHD
GSDTYSDNIIFRMTDGSNEVEFLFPITIAPTDDEPPIINANTGLVLFKNEVMQISPFILS
ATDIDSEDSTIKFILEAPYSTVGELLLRQVEPPSDPSLWNFSETDEMFEQVVTEWFQQDI
LDGKLFYRHIGPHSTTTVIDQFVFRVQDDNDPPNQSGEHMFTIKIHPVDDLAPELFPGTT
LHMTVQEYELTHFKKKFLCYTDLDSDDRDLKYTITKTPTDTDENNPASLGEIVLTDKPDT
IITEFTQAQVNHHKVAYKPPDQELGITPKVAQFTFIVEDTAGNTADGLFTIFLQPVDNKP
PVITNTGFTVMERSTYIITRKELHATDTDTDDENIVFTVSQIPRYGQLQYLGIDMTNGET
FVLEDIANGRLTYIHGGEESLSDVIKLDVSDGFHEVPITIKITIEPVDDEIPTIMLPAGL
LGASIDVLENGATEITSNVIQGRDEDTDDLMLTFIVEEPPRLGEILVNGAPAERFTQEDI
INGVVVYAHTSGEIGPVKEHDSFNLTLSDMSDQWVVGGNKVQGVTVYVTILPVDSIPPIV
SVGDQFVVIEGEKNVITLDHIQAEDIDTDNEDILCTIIVQPTSGYVENISPAAGSEKSRA
GTAITAFSIKDIALGHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPANDE
KPEIFIREFVVMEGLSLVIDTPILNAADADIPGDELHFEIIKKPKHGTIVQQLSTGTIPV
EKFNLEQIKEASNIVYEHDDSETKEDSFEIRLSDGKHIVEKTVLIMVIPVDDESPRMAIN
DGLDVEIGETKVISNRVLKATDLDSEDKDLTYVVRYGPGQGYLQRISKFGDVLGNITLGM
NFTQDEIDKQLIQYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGKVTLTTDLLSTTDINSPDEYLSFSITRAPSRGHLESTDHPGVPISTFTQLQLA
GNKIYYIHTSDDEMKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTINRLVVEEGET
KLITPFELTAEDRDTSDNQLRFIVTQVPVHGQLLFNNTQPITTFTKQDLNENLISYKHDG
TETSEDSFSFTVTDGTHTDFYVFPDTVYETRKPQMMIIHINTVDNGVPQIVVNKAAASLK
VLQTGHLGFVITSKALRSEDRDSPQRVLKYSVSEAPLHGFIINTALGNDSIKTFTQADIN
DMKICYVLLDGSNATSDIFYFTVEDNGGNKLKPQPFRLNWAWISLEREYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDGTAEKDKDFRGKAQKQVQFNPGQTIATWRVKIFTDQEFE
TSETFEIQLSDPVMAVLEFPDIATVEIVDPGDESTVFIPQAEFKIEEDIGELLVPVRRSG
DASQELMVVCFTQQATATGTIPSTVLSYSDYITRPEDHTSVLRFDKDEREKLCRIIIIDD
SLYEEEESFNVSLSMPMGGQVGANFPTAKVTILADSDDEPSLYFGEPEYIVDESSGYVEV
KVWRTGTDLSKTATVTVRSRKSDPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPELEGPETFDLVLRMPMNAVLGEPSKTTITINDTVTDLPKVQFKEGSYKVDESDGEVKA
IVYRSGDISLQSTVRCYTRQGSAQVMMDYSERPNTDASIITFLPGESEKPCVVSLMDDSI
HEEDEEFRLVLGNPKSKSPYGASVGEQKEALVTVTDEKDKSIIRFSEIKYSVREPQVKGD
VAIVKIPILRIGDTSKVSVVRVHTKDGSATSGDDYNPLSEDVEFKEGEREHFVEIEILYD
GQREMREAFTVHMKPDDNMVAEIQMNKAIVYIEEMDSVADVTFPAVPQVVSLLMYDDTVK
TKDKPHPPNGYPVVCVTACNPKYHDFDKTGSICSAENINDTLTQYRWLVSAPTGSDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRIQCAARAFNANGDAGLELSSPIVVISKEEGM
CQPRIPGTVGAEPFSAKIRYTGPDDPDFPNLIKLTVNMPHMDGMLPVISTRPLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETSPYQYSVIMRSANSLRFYR
NLNLESCLWEFTSYYDMSELLNDCGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHPGTSVSSMVMCADHPGLTFTLNLVRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKLTPCIASPNGEFSIPPVCHPREPLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
KELWLSDGSMGFGEGTDTAFSEGSMIFGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTNKEYGCLADAPSLLYRFKILDKAQPETQASAFGDVAFKATLAQDTPGALPLVKQP
GSDGFTLSSSPLFQVAAGREWFIHTIYTVRSRENANRNIGKRSVEYLHHSISSVEQPQIS
SVAARRHRRAAPALSSPALAQDIGIENNRGTNIQHIALDRADRMVVSQRQPWSPNRDPLL
ERPLLESSGREPSDTSTLPMLVGLAGLILLICLITTIVILLLRRKKKEKNTQYPPYTTSS
SSAYSGYNQRPAGMWSSSDSSEV
NT seq
9432 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaagttggcaactttgtaaaaagtgggcatttttgagatgcctg
cttgtgacattttctctcagcttctgttttgcctcattagatgcagagccatttgatcca
actcatctctatcaccacagatctggacctaatgaagacaacataatcattgccaacaat
gggatcagggtgccttttgggaggtctgtgtatctggaccctgtgaatgacctgataaca
gaagtgcagcccggtgaccgctgccacatcacagttttggacaatgacccgctggcccag
aaacctggtatgctgacccctaagaagttcccctgctcatttggaccggatgaagtgaaa
tacactcattttggatctcggagccccagcaaggatcgtgtgaagctacagcttcgttat
gactcccagacggacacagttatcatccctttcatgctggaagtggaagtggttttccag
caacttgagatcctcaccaggaatatgcctcttaatgtagagaagctcaatggtgacagc
caccctattgacaaaaagagtctggagttttcctttgaggatggtgtcacacagtgtaag
atcaccactctggtcggtgctggaggtcttcccaggtatggcactcttttgaataacccc
accaatggccaaatggttgactgtgatgagtttgtgaagcagggcattcgctataagcac
actgctaaaacaaattcaccaaacagagactatgtgccaatgatggtggagctgcaggat
aatgaaggcaacactataatgcaagagcatttccaaatgatggttagaatcagagagggt
gctgagaatacagctcctaaacctagctttgtagccatgatgatgatggaggttgatcag
tttgtgatgacagctattacaagcgacatgctggctgctgaagatgttgaatccgaccta
gatgatttaatcttcaacattacttcaccattgagccctcaacagggttatatcatcagc
acagatgatcagaacctgcctattacctccttctatcagagagacatcaaagatcttaaa
atagcctataaaccaccctcagaggactcagaagtagagaggattttccagctagagtta
gaaattgtagacacggatggtgctgtgtctgatacatttgcttttatgattgtggtgaag
cctatgaataccttggctcctgtggcaaccaaaaatacaggacagctattgtttgaaggg
cagtcccgagcgctctccagctcccagaatttagagattagtgatgaggataacctagaa
gatgtgagaattactgttgttgatggcttaaagcacggagagctcactgtgcttggcgct
cgcaggaaattcttcacaccagccgatctagacgccggcattgtggtgtaccagcatgat
ggcagcgatacctacagcgacaacattatttttagaatgactgatggcagtaatgaagta
gaatttttgttccctatcactattgctcccactgatgatgagccccctattatcaatgct
aacaccggtttggtgctattcaagaatgaagtcatgcagatctctcccttcatcctgagt
gcaacagatattgattcagaagactctaccataaagtttatcttagaggcaccctactcc
acagttggggagctgctgctaaggcaagttgagcctccatctgatccatctctctggaac
ttcagcgagacagatgagatgtttgagcaggtggtgactgagtggtttcagcaggatatt
cttgatgggaagctgttctatcgtcacatcggacctcatagcaccaccactgtgatcgat
cagtttgtgttccgggtccaagatgataatgatcctcctaatcaatcgggcgagcatatg
ttcaccatcaaaatccacccagttgatgacctagccccagaactttttccaggcaccacc
cttcacatgacagtccaggagtatgaactaacacactttaagaagaaatttttgtgttat
actgatttagattcagatgacagggaccttaagtataccatcactaagaccccaactgac
acagatgagaacaatccagcctccttaggtgaaattgtactgactgacaagcctgacact
ataattacagagttcacacaggcccaggttaatcaccacaaagtagcttacaagcctcca
gaccaggagctgggcatcactccaaaagtggctcagttcacattcattgtggaagacaca
gctggtaacacagcagatggactattcaccattttcctacaaccagttgacaacaaacca
ccagttatcaccaacacagggttcactgttatggaaagaagtacatatatcattactagg
aaggagctgcatgccactgacacagatacagatgatgaaaatatcgtctttacagtgagc
cagattcctcggtatgggcagctgcagtatttggggatcgacatgacaaatggcgaaacg
tttgtgcttgaagacatcgcaaatggacgtctaacttacatccatggaggagaagaatct
ctcagtgatgttatcaagcttgatgtcagtgatggtttccatgaagtacccatcactatt
aagatcaccatcgagcccgtcgatgatgagatccccacaattatgctcccagccggcctg
ctcggagcctccattgatgtactggagaatggagcaacagagattacgagcaatgtcatt
cagggccgtgatgaagacacagatgacctcatgctcacttttattgtagaagaacccccc
aggctgggtgaaatcctggttaacggtgctcctgctgagagattcacccaggaggacatt
attaatggggtggtggtgtacgctcacacatctggtgaaattggcccagtcaaagaacat
gactccttcaaccttactctgtctgatatgtctgaccagtgggttgttggtggtaacaag
gtccaaggtgtgacagtatatgtcactatccttccagttgacagcattccacctattgtt
agtgtcggagaccaatttgttgttattgaaggagagaaaaatgtcattactctggaccac
atccaagctgaagatattgacacagacaatgaagatatcctgtgcaccatcatcgtccaa
ccaacatctggttatgttgaaaacatctccccagctgcaggctctgagaaatccagggca
gggacagccatcactgcctttagcataaaagatattgctcttggtcatatctactatgtc
caaagtatccacaaaggtgttgaacctgtggaggatcgtttcaccttccgttgctcagat
ggtataaacttctctgaacgccacttctttcctatagtcatcattccagccaatgatgag
aaacctgaaatttttattcgtgagtttgtggtaatggagggcttgagtctggtaattgat
acaccaattctgaatgcagctgatgctgacatccctggggatgagctgcactttgagatc
atcaaaaaacccaagcatggaacaatagttcagcagctcagcactggcactatccctgtg
gaaaaattcaacttagaacaaatcaaagaggcatccaacattgtctatgaacacgatgac
tctgagacgaaagaagacagctttgaaatcagactctcagatgggaaacacatagttgaa
aaaacagttcttatcatggttattcctgttgatgatgagtcgccaaggatggctataaat
gatggccttgatgtggagattggagagacaaaagtgatcagcaacagggttttaaaagcc
acagatcttgactctgaggacaaagacctaacatatgttgtgcggtatggccctggccaa
ggctatctccagcgaatcagcaagtttggtgatgttttaggtaacatcactctggggatg
aacttcacacaggacgaaatcgacaaacagctcattcagtatgtacacacaggtcaggag
ggaatccgtgacctgctgaaatttgacgtcaccgatggtatcaatcccctcattgaccgt
tacttttacatcaacatcggaagcattgacatggtcttcccagacgttatcaacaaaggt
gtgactcttaaggaaggagggaaagtcactctcactactgacctcctcagcaccactgac
atcaacagtcctgatgaatacctcagctttagcatcacaagagcacctagcagaggccac
ttagagagcactgaccacccaggtgttcctatctccaccttcacccaactgcagcttgct
ggcaacaagatctactacatccacacctccgatgatgagatgaaaatggacagctttgag
tttgaggtaacggatggttacaatcctgtcttccgaaccttcagagtgtccatcactgat
gtagataataaaaaacctgtcctgactataaacagactggttgtagaagagggtgaaacc
aagctcatcacaccatttgagttgacagctgaggaccgagacacttcagacaaccagttg
cgcttcatagtcactcaggtgccagtgcatggccagctgcttttcaacaatacccaacca
atcacaacctttaccaagcaggacctcaatgagaaccttatcagctataagcacgatggc
accgagaccagtgaagacagtttctccttcactgtcacagacggcacacataccgatttt
tatgtctttcctgacactgtgtatgagacacgcaaaccccagatgatgatcattcatatc
aacacagttgacaatggtgtgccccaaatcgtagtcaataaggctgcagcctcactgaag
gtcctccaaacaggccacctgggcttcgtgatcaccagcaaggcccttcggtcagaggac
cgtgacagtccccagagggtcttgaaatacagtgtgtctgaggctcctctgcatggcttc
atcattaacactgccctgggcaatgacagcatcaaaactttcacacaagctgatatcaat
gacatgaagatctgttacgtgctgttggatggaagcaatgccacaagtgatatcttctac
ttcacagttgaagacaacggtggaaacaaactaaagcctcagcctttccggctcaactgg
gcttggatctcattggagagggagtattacttggtggatgaggacgccaaattcctggag
gtgacgctgaaacgcagaggttacctgggggaaacctcctttgtcagtattgccacaaag
gatggcacagctgagaaggataaggacttccgtggtaaagcccagaaacaggtccagttc
aaccctggccagactatagctacctggagggtgaagatcttcacagaccaggagtttgaa
acctcagagacctttgagatacagttgtcagacccagtcatggcggtgctggagtttcca
gacatcgcaacagtggagatagtggatcctggagatgaatcaacagtgttcattccacaa
gcagagttcaagatcgaggaggatattggagagctgttagtgcctgtacggcgctcagga
gatgccagtcaggaactcatggttgtttgtttcactcagcaagccacggccaccggcacc
atacctagcactgtcttgtcctactctgactacatcacccggcctgaggaccacaccagc
gtcctgcgtttcgataaggacgagcgtgagaaactctgtcgcatcatcatcatcgatgac
tcgctgtatgaggaggaggagagcttcaacgtcagcctcagcatgcccatgggtggccaa
gtgggcgccaacttcccaaccgccaaagtcaccatcttggcagacagtgatgatgagccc
tcgttgtactttggggaacctgaatatattgtggatgaaagttcaggctatgttgaagtg
aaggtttggaggacagggaccgatctgtccaagacagctaccgtcaccgtccgctccagg
aagagtgatcccgtctcagcagaagctggattagactacgtcggcattagtcgcaaccta
gactttgctcctggagtgacaatgcagacatttagagtgaccatcctggatgatctgggt
cagccggagctggaggggcctgagacctttgaccttgtgttacggatgcccatgaacgct
gtgctaggagaaccaagcaagaccaccatcacgatcaatgataccgtcactgacctgcct
aaggttcagtttaaggagggcagctacaaggtggacgagtctgacggggaggtaaaagcc
atagtgtaccgcagtggagacatcagcctccaatccacagtgcgctgttacactcgccag
ggctctgctcaagtcatgatggactatagtgagaggcccaacactgatgcatcaatcatc
actttcctaccaggtgagtcagagaagccgtgtgtggttagtctgatggacgactctatc
catgaagaggacgaggagttccgcttggtcctgggaaatccaaagagcaagtctccatac
ggagcctctgttggggagcagaaggaggcactggtcacagtcacagatgaaaaagacaag
tccatcatccgtttctctgagatcaagtacagtgtgcgtgaacctcaggtcaaaggagat
gtggctatagtgaagattcctatcctgcgtattggagacacctcaaaggtctcagtggtg
agagtgcacaccaaggacggctctgcaacctctggagatgactacaacccgctgtcagag
gatgtggagttcaaggagggcgagagggaacactttgtggagattgagatcctatacgac
ggtcagagagagatgagggaggccttcactgttcacatgaagcctgatgacaacatggtg
gctgaaatacagatgaacaaggccattgtgtacatcgaggagatggacagtgtagcagat
gttaccttccccgcagtgccccaggtggtttccctgctcatgtacgatgacacagttaaa
accaaagacaagccccatccacccaatggataccctgttgtgtgtgtgacggcctgcaac
cctaagtaccatgactttgataaaactggttccatctgctctgcggagaacatcaatgac
acccttacccagtaccgctggctggtcagcgcccccactgggtcagatggagtgacaagc
cccatgagggaggtggacactaacactttcttcaccaacaccaagtccatcaccttagat
tcaatctacttccaagctggctccagaattcagtgtgcagcaagagccttcaatgccaat
ggagatgcgggactggagctgtccagtcccattgttgtgatcagcaaggaggagggtatg
tgtcagcctcgtatccctggtactgttggagctgagcctttctctgcaaagatccgttac
accggcccagatgacccagacttccccaacctaatcaaactgactgtcaacatgcctcac
atggatggcatgttaccagtgatctccacaagacctctctccaactttgagcttacactg
agcccagatggcacacgtgtgggcaaccaccgttgttccaacttactggacttcaatgag
atccaaaccggccatggcttcatcaccgacgcaacaaagaacccggagatcattggcgag
acttcaccctaccagtacagcgttatcatgcgttcagccaactctctgcgcttctacagg
aacctcaacttagagtcctgcctctgggagttcaccagctactatgacatgtcagagctg
ctaaatgactgtggaggctccataggcacagatggacaggtactgaacctcgtccagtcc
tatgtcaccttgcgtgttccactatttgtatcctacgtcttccactctcctgtggctgtg
gggggctggcagcactttgacctccagtcagagctcaaactcacctttgtgtatgataca
gccattctgtggcaggacggcattggcagccctcctgaggctgagctacaaggagccatg
taccccaccagcatgcgtattaatgaggagggccgcctggttgtcaacttcaagaccgag
gctcgcttcaggggacagtttgttatgtctcatccaggaaccagcgtgtcatccatggtg
atgtgtgctgaccaccctggactgacgttcaccctcaacctggtcaggactgagcctacg
tacaaccagcccatgcagcagtggagttttgtctcagactttgctgtgcgagactactct
gggacctacactgtgaagttgaccccctgcattgcctcccccaatggggagttcagcatc
cctcctgtctgccacccaagagagcctcttacctttgacatggacatacgcttccagcag
gtgagtgacccagtagcagctgagtttagcctcaatactcagatgttcctgctgtccaag
aaggagttgtggttgtcggatggctccatgggctttggagaggggactgatactgctttt
tcagaaggctctatgatcttcggtcgtgtgatggtggacccagtccagaacctgggtgac
tccttctcctgcagcattgagaaagtcttcctctgcacaggagcagatggttatgttccc
aaatacaaccccactaacaaggagtacggatgcctggcggacgctccctctctgctttac
agatttaagatcctggacaaggcccagccagagactcaagcttcagcatttggtgatgtt
gcttttaaggccacactggcccaagacacacctggagcgctgcctttggtcaaacaacca
ggatcagatggcttcacactgtcttcatctccacttttccaggtggctgctggtcgagag
tggttcatccacaccatctacactgtccgctccagagaaaatgccaaccgcaatatcggc
aaacgcagtgtggagtacctccatcacagcatatcctctgtcgagcagccccagatctcc
agcgtagccgcccgccgccaccgccgcgctgcccctgctctctccagccctgctctggcc
caggacatcggtatcgaaaacaaccggggaaccaacatccagcacatcgctctggaccga
gcagaccgcatggtggtcagccagcgccaaccttggtcccccaaccgtgaccctctcctg
gagcggcccctgctggagagttctggcagagagccctccgacacctccaccctgcccatg
ttggtgggcctcgcaggtcttatcctcctcatctgcctcatcaccactattgtcatcctg
ctgctgaggcgcaagaagaaggaaaagaacacccagtaccctccttacaccacctcctcc
tcctctgcctacagtggctacaaccaacgtccagcaggcatgtggagcagttcagacagc
tctgaggtctag
DBGET
integrated database retrieval system
