Lates calcarifer (barramundi perch): 108893106
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Entry
108893106 CDS
T04895
Symbol
ednraa
Name
(RefSeq) endothelin receptor type Aa
KO
K04197
endothelin receptor type A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108893106 (ednraa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108893106 (ednraa)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108893106 (ednraa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108893106 (ednraa)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Endothelin
108893106 (ednraa)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108893106
NCBI-ProteinID:
XP_018546448
UniProt:
A0AAJ7VCE8
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All DBs
Position
LG5:7044645..7055278
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AA seq
443 aa
AA seq
DB search
MCSIMDTPAVHVLVLMACMTASGMCQINSAEAEKGSLVQSTGLYSTISPSTGPSVHLGAS
GADAQAVVSGSSNETVVKRLIPPPMCLQMTSINDYFKYINTTISVIVFVVGLVGNATLLR
IIYRNKCMRNGPNALIASLALGDLIYIFVDIPITAYKLLASRFPFSESSFGLCLCKFVPF
VQKASVGITVLTLCALSVDRYRAVASWSRVQGVGIPLFTVIEIVSIWVLSLILAVPEAVG
FDIITFSYRNETMRTCMLSPKSNFMMFYKDAKDWWLFGFYFCVPLACTGFFYTLMTSEML
NHRNGSLRIALSEHLKQRREVAKAVFCLVLIFALCWFPLHLSRILKKMVYHSNDSSRCEL
LSFLLVLNYLGMNLATFNSCINPIILYFVSKKFKNCFKSCLCCWCYSDNQLSSIGPMNGT
SIQCKSPEPNNVYTDRSMRKYSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccataatggataccccagctgtgcatgtgttggtgctaatggcctgtatgaca
gccagcggaatgtgccagataaacagtgctgaagcggagaagggctctctcgtccagtct
acaggtctctacagcaccatcagtccaagcacagggcccagcgtccacctgggggcctca
ggggctgatgcacaagctgtggtgtctggttcttcaaatgaaactgtcgtaaagaggctg
ataccacctccaatgtgcttgcaaatgacttctattaatgactattttaagtacatcaac
actacaatttcagttatagtgtttgtggttggcctggttggcaacgccactctcctgagg
attatataccgaaataagtgcatgaggaacggccccaatgccctgattgccagcctggct
ctgggtgaccttatctacattttcgttgatatacccatcactgcatacaagctcctggcg
tcacgctttccatttagtgagagttcttttggcctgtgtctgtgtaagtttgtgcccttc
gtgcagaaagcctctgtgggcatcactgttctcaccctgtgtgccctcagtgtggacaga
tacagggctgtggcatcctggagcagagtgcagggagtgggtattcctctgttcacagtc
attgagatagtgtctatttgggtgctgtcactcatcctggcagtacctgaggccgttggc
ttcgacataatcaccttcagctacaggaacgaaaccatgcgcacatgcatgcttagccct
aaatctaacttcatgatgttctacaaggatgcaaaggactggtggctgtttggcttctac
ttttgtgtgccactggcctgcaccggtttcttttacactctgatgaccagcgagatgctc
aaccacaggaacggcagccttcggatagctctcagtgagcacctcaaacagaggagagag
gtggccaaagctgtcttctgcctcgtcctcatctttgctctctgctggttcccactgcac
ctcagcaggatccttaagaagatggtttatcactcaaatgatagttctcgctgtgagctg
ctcagtttcctgttggtcctgaattaccttggtatgaaccttgcaacattcaactcctgc
ataaaccctattatcctctacttcgtcagcaagaagttcaaaaactgctttaagtcatgt
ttgtgctgctggtgctactctgacaaccaactgagcagcattggacccatgaatggtacc
agtatccaatgtaaaagccctgagccaaacaacgtgtacactgaccgcagcatgaggaag
tacagtaactga
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