KEGG   Lates calcarifer (barramundi perch): 108893221
Entry
108893221         CDS       T04895                                 
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin C
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03320  PPAR signaling pathway
lcf04120  Ubiquitin mediated proteolysis
lcf04137  Mitophagy - animal
lcf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108893221
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108893221
   04137 Mitophagy - animal
    108893221
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    108893221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108893221
Ubiquitin system [BR:lcf04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108893221
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 108893221
NCBI-ProteinID: XP_018546614
UniProt: A0AAJ7Q4S2
LinkDB
Position
LG20:complement(8744711..8752341)
AA seq 818 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQLNVAQVN
QPNWELFSIAEEYRSMTWSIINHPVPLTTVVRGVVTRKRDQILKSDFADMQIFVKTLTGK
TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT
LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctcactggcaagaccatcacccttgaggttgagcccagc
gataccattgagaacgtgaaagccaagatccaggacaaggaaggcattcccccagaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtctgaggggtggtatgcagatcttt
gtcaagaccctcacaggcaagaccatcacccttgaggttgagccaagcgacaccattgag
aatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctctgactacaatatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggtggcatgcagatctttgtgaaaaccctc
acaggcaagaccatcaccctggaggtcgagccaagcgataccattgagaatgtcaaggcc
aagatccaggacaaggaaggcattcccccagaccagcagaggttgatctttgccggcaag
cagctggaagatggccgcaccctctctgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgaggggcggtatgcagatcttcgtcaagaccctcactggcaagacc
atcaccctggaggtcgagccaagcgacaccattgagaatgtcaaggccaagatccaggac
aaggaaggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctctgactacaacatccagaaggagtccaccctccatctggtcctgcgt
ctgaggggtggcatgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggag
gttgagccaagcgacaccattgagaacgtgaaggccaagatccaggacaaggaaggcatt
cccccagaccagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tctgactacaacatccagaaggagtccaccctccatctggtcctgcgtctgaggggtggc
atgcagatctttgtcaagacccttactggcaagaccatcaccctggaggttgaacccagt
gacaccattgagaatgtcaaggccaagatccaggacaaggaaggcattcccccagaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtctgaggggtggtatgcagatcttt
gtcaaaaccctcactggcaagaccatcaccctggaggttgagccaagcgacaccattgag
aatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggtgggcagctaaatgtggcacaagtaaac
caaccaaactgggaactattttcgattgcggaagaatatcggtcgatgacgtggtccatt
ataaatcatcctgtccccttgacaacagtagtccgaggtgttgtcaccaggaagcgggac
caaatactgaaaagtgactttgcagacatgcagatctttgtcaagaccctcactggcaag
accatcacccttgaggttgagccaagtgacaccatcgagaatgtcaaggcaaagatccag
gacaaggaaggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaa
gatggccgcaccctctctgactacaacatccagaaggagtccaccctccatctggtcctg
cgtctgaggggcggtatgcagatctttgtcaagacccttacaggcaagaccatcaccctg
gaggttgagccaagtgacaccattgagaacgtgaaagccaagatccaggacaaggaaggc
attcccccagaccagcagaggctgatctttgctggcaagcagctggaagatggccgcacc
ctctctgactacaacatccagaaggagtccaccctccatctggtcctgcgtctgaggggt
ggcatgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggaggttgaaccc
agtgacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattcccccagac
cagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctctctgactac
aacatccagaaggagtccaccctccatctggtcctgcgtctgaggggtggtcaataa

DBGET integrated database retrieval system