Lates calcarifer (barramundi perch): 108893238
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Entry
108893238 CDS
T04895
Symbol
crx
Name
(RefSeq) cone-rod homeobox protein
KO
K18490
homeobox protein OTX2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108893238 (crx)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108893238 (crx)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
DUF5930
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
108893238
NCBI-ProteinID:
XP_018546638
UniProt:
A0AAJ7Q4U5
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Position
LG20:complement(5950235..5952413)
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AA seq
295 aa
AA seq
DB search
MMSYIKQPHYTMNGLNLPGPGMDVLHTTVAYPSTPRKQRRERTTFTRTQLDILEALFSKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKASPVQEPS
APDPVPNPSSSYSPSTAQSGPSLAPSSSTGNTAVSIWSPAISPLPDPLASSSAPCMQRPS
PYPMSYGQPSAYTQGYASTTSYFTGLDCSAYLSPMHSQLSGTGGALSPITVPSMGGSLSQ
SPASLSSQGYSTASSLGFTSVDCLDYKDQQAWKLGFTTMDCLDHKDQNSWKFQVL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacataaagcaaccccattacaccatgaacgggttaaatttgcctggaccc
ggaatggacgtgcttcacacgaccgtcgcttatccatccacaccccggaagcagcgtagg
gagcgcaccaccttcacccggacgcagctggacatcctggaggcgctgttctccaagacc
cgctacccagacatctttatgagggaggaggtggccctcaagatcaacctgcctgagtca
cgcgtgcaggtttggtttaaaaaccgccgtgccaagtgccgtcagcagcagcagcagagc
agtggccagtccaagccccgccctcctaagaagaaggcctctccagtgcaggagcccagc
gcccctgatcctgttcctaacccatctagttcctacagcccttctactgcccagtcaggc
cccagcctggcgccaagctccagcaccgggaacactgctgtgtccatctggagcccagcc
atctcgcccctccctgaccctctggcctcctcctcggccccctgcatgcagcggccctca
ccttaccctatgagctacggccagccgtcggcttacacccaaggctacgccagcaccacc
tcctacttcaccggtttggactgcagcgcctacctgtcccccatgcactcgcagctgtcg
ggcactgggggcgctctcagccccatcactgtgccctcaatggggggatccttaagtcag
tccccagcctcactgtcctcacagggctacagcacagcctcctccctgggcttcacctct
gttgactgcctggactacaaggaccagcaggcctggaaactgggcttcaccacaatggac
tgcctggaccacaaagaccaaaactcctggaagttccaggtgctctag
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