Lates calcarifer (barramundi perch): 108893298
Help
Entry
108893298 CDS
T04895
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108893298
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108893298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
zf-TRAF
F-box
Motif
Other DBs
NCBI-GeneID:
108893298
NCBI-ProteinID:
XP_018546727
UniProt:
A0AAJ7Q4N3
LinkDB
All DBs
Position
LG20:20013918..20019577
Genome browser
AA seq
713 aa
AA seq
DB search
MSYRSRASKVQQHVHCDSCYSRRCRARVEASVCCTVVPCRLLCGAVFHLCKEEDHLLLCP
NVRVPCLNAEYGCPVQLPRSAQAAHLQVCPASVVCCSMDWLRWPTDDTNPHSNIALQENL
LKEKDKQGEALDFAMALVDQSDLYSRLKMKPLYPELMEEEEEEEVKEEEKKEEMAVGGFV
NGVTDNDATEENSLCERRVEETVRGVMVQNLALLKERHSMFEMMFGMDKGGCTVAQENLN
NPKPEEKEKAQSAVKKTSADCKDKEKGGAAMSKNCPPPDTSKTGLAPWQEGVVDRLGKEL
TPQEYNMYVVHHGRMLVAFGQIEACTPREKDFVYGSLEPIPVQTLCSFKIPDSYHYRRRV
HLYDTASRAQSEPRSVDTSDLTANEEDWFSDEAAATLLGYAEKEVMGHKISESKAADGLY
VDVGTQTHSFRTAPFKKKTTLEEVMVDRPLKLRLELQAESVNSRHTRASCAFAFLCGHTF
HRKEFATHFRNVHSEIQTGLSGWFEQRCPLAYLGCTYSQKRFQPSTHKATITYNQQLRTF
NLRPTLVVSLIDDSQQSTVDSFAAQGEGKGQAGGGEDSLSLLPYEVLCHMASFLDSLSLS
QLALVSRLMRQVCSSLLQERGMVTLHWERKTSSHGGAKWRAKPVWEFSHLFSSVDSWHMA
DTPPISAHLKVCPYYKTSVHSEPVPLPSMSEKQGCSQERMSLVNHFTQNRWQQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcgttctcgagcctccaaggtgcaacagcatgtccactgtgattcctgctac
agccggcgctgcagggctcgggtggaggcctccgtgtgctgcacggtcgtcccctgccga
ctgctctgcggagcagtcttccacctgtgcaaagaggaggaccacctgctgctctgccca
aacgtgagggtgccttgccttaatgctgagtatggttgcccggtccagctgccccgctct
gcgcaggcagctcacctccaggtgtgtccggccagcgtggtgtgctgctccatggactgg
ctccgctggccaactgatgacacaaacccacacagtaacatagccctgcaggagaatctg
ctgaaggaaaaggacaagcagggggaggctctggattttgccatggccctggttgatcag
tcagacctttacagccgcctgaaaatgaagcccctctatccagagctgatggaggaagaa
gaggaggaggaagtaaaggaggaggagaagaaggaggagatggcagtgggagggtttgtc
aacggtgttacagacaatgatgctactgaagaaaacagtttgtgtgagagacgtgttgaa
gagactgtacggggcgttatggtacaaaacctggccctcctcaaagagagacacagcatg
tttgagatgatgttcggcatggacaagggcggctgcactgttgctcaggaaaacctcaac
aatcccaaacccgaagagaaggagaaggcccagagtgcggtgaaaaagacgagtgcggac
tgcaaagacaaagagaaaggtggtgcagctatgtctaaaaactgccccccgccggacaca
agtaagacaggcctggccccatggcaggagggtgtggtggaccgtctagggaaggagctc
accccgcaggagtacaacatgtacgtggtgcatcatgggcgcatgctggttgcgtttgga
caaattgaggcctgtacaccgagggagaaagattttgtctatggcagcctggagcctatt
ccagtccagaccctgtgctcctttaagatccccgacagctatcactacaggcggcgggtt
catctgtacgacacagcttcaagggctcagagcgagcctcgcagcgtggacacgtcagac
ctcacagccaacgaagaggactggttcagtgatgaggcagcagccaccctgctgggctat
gctgagaaggaggtcatgggtcacaagatcagtgagtcaaaggcagccgatgggctctat
gttgatgtgggaacacagacacactcgttccgcacggctcctttcaaaaagaagacaact
ctggaggaggtgatggtggacagacccctgaagcttcgtctggagctgcaggcagagagc
gtgaacagcagacacaccagagccagctgtgccttcgccttcctctgtggccacaccttc
caccgcaaagagtttgccacacatttcaggaatgttcacagtgaaatccagacaggtctg
agtggatggtttgagcagagatgccccttagcatatctgggatgcacctatagccagaag
aggtttcagccttccacacataaagccaccatcacctacaatcaacagctgaggactttc
aacttgcgtccgaccctcgtagtctcattaattgatgactcccagcaatcaacagtggac
tcctttgctgctcagggggagggaaaaggtcaggcgggaggaggggaggactctctaagc
ttgctgccctacgaggtgctgtgccacatggctagtttcctggacagtctgtccctgtct
cagctggctctggtgtcccgactcatgaggcaggtgtgctcctccctgctgcaggagaga
gggatggtcactcttcactgggagaggaagacctcctcacatggaggagccaagtggagg
gccaaacctgtatgggagttcagtcatctcttctcctctgtggactcgtggcatatggca
gacaccccccctatatctgctcatctaaaagtctgtccttactataagacctctgtgcac
agtgagcctgttcctctccccagcatgagtgagaaacaggggtgcagccaagagagaatg
agccttgtcaatcattttacacaaaacagatggcaacagtga
DBGET
integrated database retrieval system